| Detail | View | Genename | ALL BOTH # of samples with two haploids were completely
assembled. For the case, cataloged to JoGo haplotype database
|
JPT BOTH # of JPT samples with two haploids were completely
assembled. For the case, cataloged to JoGo haplotype database
|
ALL SINGLE # of samples with one haploid was assembled. For
chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and
cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was
imcomplete and did not catalog in JoGo haplotype database
|
JPT SINGLE # of JPT samples with one haploid was assembled.
For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample
and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was
imcomplete and did not catalog in JoGo haplotype database
|
ALL MULTI # of samples with more than two haploid was
assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo
haplotype database
|
JPT MULTI # of JPT samples with more than two haploid was
assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo
haplotype database
|
ALL BOTH # of samples with two haploids were completely
assembled/# of total samples
|
JPT BOTH # of JPT samples with two haploids were completely
assembled/# of total JPT samples
|
ALL SINGLE # of samples with one haploid was assembled/# of
total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged
from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not
catalog in JoGo haplotype database
|
JPT SINGLE # of JPT samples with one haploid was
assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means
completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was
imcomplete and did not catalog in JoGo haplotype database
|
ALL MULTI # of samples with more than two haploid was
assembled/# of total samples. For the case, two haploids cannot correctly assembled and did
not catalog in JoGo haplotype database
|
JPT MULTI # of JPT samples with more than two haploid was
assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and
did not catalog in JoGo haplotype database
|
Chr | Start | End |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view | ATG7 | 145 | 34 | 72 | 44 | 0 | 0 | 0.562 | 0.132 | 0.279 | 0.171 | 0.000 | 0.000 | chr3 | 11267397 | 11562665 | |
| view | ATG9A | 173 | 49 | 73 | 44 | 0 | 0 | 0.671 | 0.190 | 0.283 | 0.171 | 0.000 | 0.000 | chr2 | 219214380 | 219234636 | |
| view | ATG9B | 232 | 86 | 22 | 15 | 0 | 0 | 0.899 | 0.333 | 0.085 | 0.058 | 0.000 | 0.000 | chr7 | 151010151 | 151029494 | |
| view | ATIC | 190 | 61 | 59 | 36 | 0 | 0 | 0.736 | 0.236 | 0.229 | 0.140 | 0.000 | 0.000 | chr2 | 215307059 | 215354764 | |
| view | ATL1 | 159 | 48 | 84 | 49 | 0 | 0 | 0.616 | 0.186 | 0.326 | 0.190 | 0.000 | 0.000 | chr14 | 50555145 | 50638045 | |
| view | ATL2 | 117 | 22 | 121 | 72 | 0 | 0 | 0.453 | 0.085 | 0.469 | 0.279 | 0.000 | 0.000 | chr2 | 38288954 | 38382273 | |
| view | ATL3 | 120 | 17 | 114 | 74 | 0 | 0 | 0.465 | 0.066 | 0.442 | 0.287 | 0.000 | 0.000 | chr11 | 63619087 | 63676376 | |
| view | ATMIN | 195 | 75 | 59 | 27 | 0 | 0 | 0.756 | 0.291 | 0.229 | 0.105 | 0.000 | 0.000 | chr16 | 81030842 | 81052350 | |
| view | ATM | 151 | 46 | 87 | 47 | 0 | 0 | 0.585 | 0.178 | 0.337 | 0.182 | 0.000 | 0.000 | chr11 | 108218067 | 108374102 | |
| view | ATN1 | 206 | 70 | 47 | 32 | 0 | 0 | 0.798 | 0.271 | 0.182 | 0.124 | 0.000 | 0.000 | chr12 | 6922959 | 6947321 | |
| view | ATOH1 | 228 | 85 | 29 | 19 | 0 | 0 | 0.884 | 0.329 | 0.112 | 0.074 | 0.000 | 0.000 | chr4 | 93823753 | 93835964 | |
| view | ATOH7 | 192 | 60 | 61 | 41 | 1 | 0 | 0.744 | 0.233 | 0.236 | 0.159 | 0.004 | 0.000 | chr10 | 68225595 | 68237113 | |
| view | ATOH8 | 188 | 57 | 54 | 36 | 0 | 0 | 0.729 | 0.221 | 0.209 | 0.140 | 0.000 | 0.000 | chr2 | 85748991 | 85796383 | |
| view | ATOSA | 180 | 66 | 67 | 31 | 0 | 0 | 0.698 | 0.256 | 0.260 | 0.120 | 0.000 | 0.000 | chr15 | 52576321 | 52684388 | |
| view | ATOSB | 215 | 78 | 37 | 23 | 1 | 0 | 0.833 | 0.302 | 0.143 | 0.089 | 0.004 | 0.000 | chr9 | 35099117 | 35120862 | |
| view | ATOX1 | 188 | 58 | 57 | 36 | 0 | 0 | 0.729 | 0.225 | 0.221 | 0.140 | 0.000 | 0.000 | chr5 | 151737822 | 151763631 | |
| view | ATP10A | 149 | 35 | 53 | 38 | 0 | 0 | 0.578 | 0.136 | 0.205 | 0.147 | 0.000 | 0.000 | chr15 | 25673712 | 25868327 | |
| view | ATP10B | 117 | 25 | 73 | 42 | 0 | 0 | 0.453 | 0.097 | 0.283 | 0.163 | 0.000 | 0.000 | chr5 | 160558120 | 160857211 | |
| view | ATP10D | 165 | 44 | 65 | 49 | 0 | 0 | 0.640 | 0.171 | 0.252 | 0.190 | 0.000 | 0.000 | chr4 | 47480275 | 47598486 | |
| view | ATP11A | 126 | 25 | 72 | 41 | 0 | 0 | 0.488 | 0.097 | 0.279 | 0.159 | 0.000 | 0.000 | chr13 | 112685038 | 112892168 | |
| view | ATP11B | 161 | 59 | 74 | 34 | 0 | 0 | 0.624 | 0.229 | 0.287 | 0.132 | 0.000 | 0.000 | chr3 | 182788504 | 182926629 | |
| view | ATP11C | 54 | 15 | 180 | 76 | 0 | 0 | 0.209 | 0.058 | 0.698 | 0.295 | 0.000 | 0.000 | chrX | 139721348 | 139938053 | |
| view | ATP12A | 190 | 57 | 52 | 36 | 0 | 0 | 0.736 | 0.221 | 0.202 | 0.140 | 0.000 | 0.000 | chr13 | 24675408 | 24717472 | |
| view | ATP13A1 | 189 | 56 | 61 | 41 | 0 | 0 | 0.733 | 0.217 | 0.236 | 0.159 | 0.000 | 0.000 | chr19 | 19640198 | 19668676 | |
| view | ATP13A2 | 182 | 61 | 64 | 39 | 0 | 0 | 0.705 | 0.236 | 0.248 | 0.151 | 0.000 | 0.000 | chr1 | 16980958 | 17016928 | |
| view | ATP13A3 | 151 | 52 | 81 | 34 | 0 | 0 | 0.585 | 0.202 | 0.314 | 0.132 | 0.000 | 0.000 | chr3 | 194397677 | 194492002 | |
| view | ATP13A4 | 150 | 46 | 62 | 40 | 0 | 0 | 0.581 | 0.178 | 0.240 | 0.155 | 0.000 | 0.000 | chr3 | 193393967 | 193559895 | |
| view | ATP13A5 | 141 | 42 | 78 | 46 | 0 | 0 | 0.547 | 0.163 | 0.302 | 0.178 | 0.000 | 0.000 | chr3 | 193269789 | 193383753 | |
| view | ATP1A1 | 167 | 50 | 83 | 48 | 0 | 0 | 0.647 | 0.194 | 0.322 | 0.186 | 0.000 | 0.000 | chr1 | 116368244 | 116409774 | |
| view | ATP1A2 | 206 | 75 | 44 | 23 | 0 | 0 | 0.798 | 0.291 | 0.171 | 0.089 | 0.000 | 0.000 | chr1 | 160110759 | 160148591 | |
| view | ATP1A3 | 140 | 36 | 98 | 56 | 0 | 0 | 0.543 | 0.140 | 0.380 | 0.217 | 0.000 | 0.000 | chr19 | 41961582 | 41999230 | |
| view | ATP1A4 | 208 | 66 | 40 | 31 | 0 | 0 | 0.806 | 0.256 | 0.155 | 0.120 | 0.000 | 0.000 | chr1 | 160146603 | 160191980 | |
| view | ATP1B1 | 205 | 65 | 42 | 30 | 0 | 0 | 0.795 | 0.252 | 0.163 | 0.116 | 0.000 | 0.000 | chr1 | 169101690 | 169137719 | |
| view | ATP1B2 | 219 | 75 | 37 | 28 | 0 | 0 | 0.849 | 0.291 | 0.143 | 0.109 | 0.000 | 0.000 | chr17 | 7645926 | 7662770 | |
| view | ATP1B3 | 203 | 74 | 44 | 24 | 0 | 0 | 0.787 | 0.287 | 0.171 | 0.093 | 0.000 | 0.000 | chr3 | 141871643 | 141931549 | |
| view | ATP1B4 | 113 | 41 | 139 | 59 | 1 | 0 | 0.438 | 0.159 | 0.539 | 0.229 | 0.004 | 0.000 | chrX | 120357089 | 120388237 | |
| view | ATP23 | 196 | 68 | 54 | 30 | 0 | 0 | 0.760 | 0.264 | 0.209 | 0.116 | 0.000 | 0.000 | chr12 | 57936567 | 57964148 | |
| view | ATP2A1 | 189 | 70 | 61 | 31 | 0 | 0 | 0.733 | 0.271 | 0.236 | 0.120 | 0.000 | 0.000 | chr16 | 28873488 | 28909466 | |
| view | ATP2A2 | 113 | 14 | 122 | 77 | 0 | 0 | 0.438 | 0.054 | 0.473 | 0.298 | 0.000 | 0.000 | chr12 | 110276247 | 110356093 | |
| view | ATP2A3 | 165 | 35 | 68 | 48 | 0 | 0 | 0.640 | 0.136 | 0.264 | 0.186 | 0.000 | 0.000 | chr17 | 3918873 | 3969437 | |
| view | ATP2B1 | 165 | 47 | 70 | 46 | 0 | 0 | 0.640 | 0.182 | 0.271 | 0.178 | 0.000 | 0.000 | chr12 | 89583049 | 89713838 | |
| view | ATP2B2 | 144 | 33 | 65 | 43 | 0 | 0 | 0.558 | 0.128 | 0.252 | 0.167 | 0.000 | 0.000 | chr3 | 10319023 | 10510586 | |
| view | ATP2B3 | 73 | 16 | 161 | 70 | 0 | 0 | 0.283 | 0.062 | 0.624 | 0.271 | 0.000 | 0.000 | chrX | 153512642 | 153587929 | |
| view | ATP2B4 | 158 | 56 | 56 | 35 | 0 | 0 | 0.612 | 0.217 | 0.217 | 0.136 | 0.000 | 0.000 | chr1 | 203621832 | 203749081 | |
| view | ATP2C1 | 190 | 72 | 61 | 31 | 0 | 0 | 0.736 | 0.279 | 0.236 | 0.120 | 0.000 | 0.000 | chr3 | 130889084 | 131008150 | |
| view | ATP2C2 | 215 | 76 | 29 | 20 | 0 | 0 | 0.833 | 0.295 | 0.112 | 0.078 | 0.000 | 0.000 | chr16 | 84363538 | 84469187 | |
| view | ATP4A | 212 | 71 | 39 | 27 | 0 | 0 | 0.822 | 0.275 | 0.151 | 0.105 | 0.000 | 0.000 | chr19 | 35545031 | 35568658 | |
| view | ATP4B | 227 | 79 | 27 | 22 | 0 | 0 | 0.880 | 0.306 | 0.105 | 0.085 | 0.000 | 0.000 | chr13 | 113643804 | 113663198 | |
| view | ATP5F1A | 194 | 67 | 58 | 32 | 0 | 0 | 0.752 | 0.260 | 0.225 | 0.124 | 0.000 | 0.000 | chr18 | 46075248 | 46103296 | |
| view | ATP5F1B | 194 | 71 | 62 | 32 | 0 | 0 | 0.752 | 0.275 | 0.240 | 0.124 | 0.000 | 0.000 | chr12 | 56633175 | 56650984 |