Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ATP5F1C 209 81 44 20 0 0 0.810 0.314 0.171 0.078 0.000 0.000 chr10 7783177 7812801
view ATP5F1D 205 65 41 28 1 1 0.795 0.252 0.159 0.109 0.004 0.004 chr19 1236751 1249825
view ATP5F1E 201 61 54 41 0 0 0.779 0.236 0.209 0.159 0.000 0.000 chr20 59020475 59037335
view ATP5IF1 179 52 74 48 0 0 0.694 0.202 0.287 0.186 0.000 0.000 chr1 28231124 28243100
view ATP5MC1 166 46 84 52 0 0 0.643 0.178 0.326 0.202 0.000 0.000 chr17 48887787 48900871
view ATP5MC2 208 71 45 30 1 1 0.806 0.275 0.174 0.116 0.004 0.004 chr12 53660170 53681083
view ATP5MC3 194 68 60 33 0 0 0.752 0.264 0.233 0.128 0.000 0.000 chr2 175171258 175186710
view ATP5ME 196 55 57 46 0 0 0.760 0.213 0.221 0.178 0.000 0.000 chr4 667436 679276
view ATP5MF 172 54 82 48 0 0 0.667 0.209 0.318 0.186 0.000 0.000 chr7 99453195 99471167
view ATP5MGL 186 55 64 43 2 1 0.721 0.213 0.248 0.167 0.008 0.004 chr22 42634803 42645601
view ATP5MG 167 67 88 38 0 0 0.647 0.260 0.341 0.147 0.000 0.000 chr11 118396606 118414847
view ATP5MJ 219 77 33 23 0 0 0.849 0.298 0.128 0.089 0.000 0.000 chr14 103907288 103926529
view ATP5MK 218 85 39 19 0 0 0.845 0.329 0.151 0.074 0.000 0.000 chr10 103384050 103401475
view ATP5PB 216 84 40 19 0 0 0.837 0.326 0.155 0.074 0.000 0.000 chr1 111444464 111467773
view ATP5PD 213 68 42 34 1 1 0.826 0.264 0.163 0.132 0.004 0.004 chr17 75033863 75051969
view ATP5PF 207 76 49 27 1 1 0.802 0.295 0.190 0.105 0.004 0.004 chr21 25719500 25739904
view ATP5PO 217 78 37 24 2 1 0.841 0.302 0.143 0.093 0.008 0.004 chr21 33898453 33920804
view ATP6AP1 86 21 169 81 0 0 0.333 0.081 0.655 0.314 0.000 0.000 chrX 154423677 154441516
view ATP6AP2 86 26 165 73 0 0 0.333 0.101 0.640 0.283 0.000 0.000 chrX 40575970 40611848
view ATP6V0A1 159 41 77 48 0 0 0.616 0.159 0.298 0.186 0.000 0.000 chr17 42453878 42527579
view ATP6V0A2 110 13 134 85 0 0 0.426 0.050 0.519 0.329 0.000 0.000 chr12 123707353 123766755
view ATP6V0A4 187 54 42 32 0 0 0.725 0.209 0.163 0.124 0.000 0.000 chr7 138701294 138803196
view ATP6V0B 197 69 58 33 0 0 0.764 0.267 0.225 0.128 0.000 0.000 chr1 43969960 43983295
view ATP6V0C 167 46 85 55 1 0 0.647 0.178 0.329 0.213 0.004 0.000 chr16 2508952 2525218
view ATP6V0D1 86 11 158 83 0 0 0.333 0.043 0.612 0.322 0.000 0.000 chr16 67433019 67486157
view ATP6V0D2 179 60 64 35 0 0 0.694 0.233 0.248 0.136 0.000 0.000 chr8 86093910 86159225
view ATP6V0E1 146 37 84 48 0 0 0.566 0.143 0.326 0.186 0.000 0.000 chr5 172978771 173040445
view ATP6V0E2 218 77 32 21 4 3 0.845 0.298 0.124 0.081 0.016 0.012 chr7 149868969 149885695
view ATP6V1A 155 52 81 44 0 0 0.601 0.202 0.314 0.171 0.000 0.000 chr3 113742035 113817056
view ATP6V1B1 219 78 31 20 0 0 0.849 0.302 0.120 0.078 0.000 0.000 chr2 70930900 70970431
view ATP6V1B2 200 68 50 33 0 0 0.775 0.264 0.194 0.128 0.000 0.000 chr8 20192381 20226696
view ATP6V1C1 205 77 44 23 0 0 0.795 0.298 0.171 0.089 0.000 0.000 chr8 103016083 103078051
view ATP6V1C2 176 50 57 37 0 0 0.682 0.194 0.221 0.143 0.000 0.000 chr2 10716630 10790110
view ATP6V1D 173 57 76 44 0 0 0.671 0.221 0.295 0.171 0.000 0.000 chr14 67332872 67364804
view ATP6V1E1 184 56 55 34 0 0 0.713 0.217 0.213 0.132 0.000 0.000 chr22 17587136 17633749
view ATP6V1E2 204 72 44 26 0 0 0.791 0.279 0.171 0.101 0.000 0.000 chr2 46506847 46547577
view ATP6V1FNB 220 80 35 23 2 1 0.853 0.310 0.136 0.089 0.008 0.004 chr7 128861330 128877047
view ATP6V1F 220 75 33 25 1 1 0.853 0.291 0.128 0.097 0.004 0.004 chr7 128857856 128870847
view ATP6V1G1 209 74 45 27 0 0 0.810 0.287 0.174 0.105 0.000 0.000 chr9 114582769 114603879
view ATP6V1G2 217 76 39 28 2 1 0.841 0.295 0.151 0.109 0.008 0.004 chr6 31539444 31551608
view ATP6V1G3 202 67 52 34 0 0 0.783 0.260 0.202 0.132 0.000 0.000 chr1 198518222 198545680
view ATP6V1H 142 49 90 45 0 0 0.550 0.190 0.349 0.174 0.000 0.000 chr8 53710543 53848245
view ATP7A 52 14 173 72 0 0 0.202 0.054 0.671 0.279 0.000 0.000 chrX 77905693 78055395
view ATP7B 150 30 78 52 0 0 0.581 0.116 0.302 0.202 0.000 0.000 chr13 51927669 52016450
view ATP8A1 154 38 69 43 0 0 0.597 0.147 0.267 0.167 0.000 0.000 chr4 42403373 42662105
view ATP8A2 60 5 85 46 0 0 0.233 0.019 0.329 0.178 0.000 0.000 chr13 25366974 26030851
view ATP8B1 156 40 60 40 0 0 0.605 0.155 0.233 0.155 0.000 0.000 chr18 57641426 57808315
view ATP8B2 190 62 65 42 1 0 0.736 0.240 0.252 0.163 0.004 0.000 chr1 154320525 154356304
view ATP8B3 194 51 39 31 0 0 0.752 0.198 0.151 0.120 0.000 0.000 chr19 1777075 1817276
view ATP8B4 126 23 75 50 0 0 0.488 0.089 0.291 0.194 0.000 0.000 chr15 49853238 50124233