Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ATP9A 155 39 58 39 0 0 0.601 0.151 0.225 0.151 0.000 0.000 chr20 51591514 51773390
view ATP9B 148 46 74 37 0 0 0.574 0.178 0.287 0.143 0.000 0.000 chr18 79064394 79383283
view ATPAF1 205 76 47 27 0 0 0.795 0.295 0.182 0.105 0.000 0.000 chr1 46627737 46673364
view ATPAF2 163 43 86 55 0 0 0.632 0.167 0.333 0.213 0.000 0.000 chr17 18013021 18044168
view ATPSCKMT 178 47 67 46 0 0 0.690 0.182 0.260 0.178 0.000 0.000 chr5 10220507 10254888
view ATRAID 150 34 104 68 0 0 0.581 0.132 0.403 0.264 0.000 0.000 chr2 27207041 27222157
view ATRIP 179 63 75 38 0 0 0.694 0.244 0.291 0.147 0.000 0.000 chr3 48441737 48472645
view ATRNL1 63 7 109 62 0 0 0.244 0.027 0.422 0.240 0.000 0.000 chr10 115088365 115953999
view ATRN 109 15 87 56 0 0 0.422 0.058 0.337 0.217 0.000 0.000 chr20 3466018 3656118
view ATRX 47 11 176 73 0 0 0.182 0.043 0.682 0.283 0.000 0.000 chrX 77499880 77791216
view ATR 160 53 79 42 0 0 0.620 0.205 0.306 0.163 0.000 0.000 chr3 142444235 142583733
view ATXN10 157 56 77 39 0 0 0.609 0.217 0.298 0.151 0.000 0.000 chr22 45666834 45850307
view ATXN1L 208 74 47 30 1 0 0.806 0.287 0.182 0.116 0.004 0.000 chr16 71840976 71862328
view ATXN1 90 16 81 47 0 0 0.349 0.062 0.314 0.182 0.000 0.000 chr6 16294112 16766460
view ATXN2L 190 70 62 30 0 0 0.736 0.271 0.240 0.116 0.000 0.000 chr16 28817999 28842232
view ATXN2 148 53 87 39 0 0 0.574 0.205 0.337 0.151 0.000 0.000 chr12 111447214 111604315
view ATXN3L 95 26 161 78 0 0 0.368 0.101 0.624 0.302 0.000 0.000 chrX 13313647 13325053
view ATXN3 200 64 47 32 0 0 0.775 0.248 0.182 0.124 0.000 0.000 chr14 92053552 92111582
view ATXN7L1 125 30 63 40 0 0 0.484 0.116 0.244 0.155 0.000 0.000 chr7 105599772 105881599
view ATXN7L2 165 44 85 56 1 0 0.640 0.171 0.329 0.217 0.004 0.000 chr1 109478905 109497734
view ATXN7L3B 203 73 53 31 1 0 0.787 0.283 0.205 0.120 0.004 0.000 chr12 74532835 74550430
view ATXN7L3 189 64 65 38 0 0 0.733 0.248 0.252 0.147 0.000 0.000 chr17 44186805 44204884
view ATXN7 149 52 86 47 0 0 0.578 0.202 0.333 0.182 0.000 0.000 chr3 63858867 64008462
view AUH 178 66 55 31 0 0 0.690 0.256 0.213 0.120 0.000 0.000 chr9 91208823 91366918
view AUNIP 175 61 70 36 0 0 0.678 0.236 0.271 0.140 0.000 0.000 chr1 25829006 25864457
view AUP1 193 72 63 31 0 0 0.748 0.279 0.244 0.120 0.000 0.000 chr2 74521652 74534706
view AURKAIP1 178 51 76 50 1 1 0.690 0.198 0.295 0.194 0.004 0.004 chr1 1368736 1380207
view AURKA 191 62 58 35 0 0 0.740 0.240 0.225 0.136 0.000 0.000 chr20 56364390 56397215
view AURKB 213 68 36 28 0 0 0.826 0.264 0.140 0.109 0.000 0.000 chr17 8199734 8215575
view AURKC 204 64 49 36 0 0 0.791 0.248 0.190 0.140 0.000 0.000 chr19 57226023 57240548
view AUTS2 38 1 121 59 0 0 0.147 0.004 0.469 0.229 0.000 0.000 chr7 69593475 70798506
view AVEN 132 32 72 46 0 0 0.512 0.124 0.279 0.178 0.000 0.000 chr15 33861227 34044204
view AVIL 185 57 58 38 0 0 0.717 0.221 0.225 0.147 0.000 0.000 chr12 57792380 57823734
view AVL9 164 50 74 46 0 0 0.636 0.194 0.287 0.178 0.000 0.000 chr7 32490489 32593726
view AVPI1 222 76 31 25 1 0 0.860 0.295 0.120 0.097 0.004 0.000 chr10 97672424 97692241
view AVPR1A 223 81 31 20 1 1 0.864 0.314 0.120 0.078 0.004 0.004 chr12 63137759 63156201
view AVPR1B 197 64 55 37 1 0 0.764 0.248 0.213 0.143 0.004 0.000 chr1 206101936 206122388
view AVPR2 97 29 157 72 0 0 0.376 0.112 0.609 0.279 0.000 0.000 chrX 153899673 153912166
view AVP 233 86 22 16 0 0 0.903 0.333 0.085 0.062 0.000 0.000 chr20 3077556 3089724
view AWAT1 92 25 163 77 1 1 0.357 0.097 0.632 0.298 0.004 0.004 chrX 70229655 70245659
view AWAT2 105 35 148 67 1 0 0.407 0.136 0.574 0.260 0.004 0.000 chrX 70035542 70054938
view AXDND1 177 60 63 37 0 0 0.686 0.233 0.244 0.143 0.000 0.000 chr1 179360971 179559735
view AXIN1 188 51 48 37 0 0 0.729 0.198 0.186 0.143 0.000 0.000 chr16 282440 357723
view AXIN2 200 64 45 31 0 0 0.775 0.248 0.174 0.120 0.000 0.000 chr17 65523563 65566648
view AXL 156 42 78 51 0 0 0.605 0.163 0.302 0.198 0.000 0.000 chr19 41214223 41266766
view AZGP1 215 74 40 30 0 0 0.833 0.287 0.155 0.116 0.000 0.000 chr7 99961730 99981031
view AZI2 179 55 60 40 1 1 0.694 0.213 0.233 0.155 0.004 0.004 chr3 28316047 28353824
view AZIN1 189 67 65 37 0 0 0.733 0.260 0.252 0.143 0.000 0.000 chr8 102821308 102869163
view AZIN2 160 46 80 46 0 0 0.620 0.178 0.310 0.178 0.000 0.000 chr1 33076153 33128492
view AZU1 195 59 48 33 0 0 0.756 0.229 0.186 0.128 0.000 0.000 chr19 822837 837018