Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view BCAS3 37 1 146 74 0 0 0.143 0.004 0.566 0.287 0.000 0.000 chr17 60672851 61397831
view BCAS4 134 27 81 55 0 0 0.519 0.105 0.314 0.213 0.000 0.000 chr20 50790061 50882177
view BCAT1 160 45 56 35 0 0 0.620 0.174 0.217 0.136 0.000 0.000 chr12 24805024 24954101
view BCAT2 203 65 43 30 0 0 0.787 0.252 0.167 0.116 0.000 0.000 chr19 48790064 48816029
view BCCIP 222 84 33 20 0 0 0.860 0.326 0.128 0.078 0.000 0.000 chr10 125818546 125841551
view BCDIN3D 209 71 48 33 0 0 0.810 0.275 0.186 0.128 0.000 0.000 chr12 49831043 49848106
view BCHE 151 49 93 48 0 0 0.585 0.190 0.360 0.186 0.000 0.000 chr3 165767904 165842423
view BCKDHA 186 58 63 41 0 0 0.721 0.225 0.244 0.159 0.000 0.000 chr19 41392818 41430002
view BCKDHB 146 48 88 45 0 0 0.566 0.186 0.341 0.174 0.000 0.000 chr6 80101671 80351270
view BCKDK 149 31 102 69 0 0 0.578 0.120 0.395 0.267 0.000 0.000 chr16 31103386 31117791
view BCL10 222 81 33 22 0 0 0.860 0.314 0.128 0.085 0.000 0.000 chr1 85260776 85281632
view BCL11A 130 24 86 53 0 0 0.504 0.093 0.333 0.205 0.000 0.000 chr2 60452194 60558654
view BCL11B 174 48 48 33 0 0 0.674 0.186 0.186 0.128 0.000 0.000 chr14 99164287 99277197
view BCL2A1 217 76 40 28 0 0 0.841 0.295 0.155 0.109 0.000 0.000 chr15 79955892 79976196
view BCL2L10 228 84 26 18 0 0 0.884 0.326 0.101 0.070 0.000 0.000 chr15 52104263 52117775
view BCL2L11 198 77 49 24 0 0 0.767 0.298 0.190 0.093 0.000 0.000 chr2 111115914 111173444
view BCL2L12 189 58 62 40 0 0 0.733 0.225 0.240 0.155 0.000 0.000 chr19 49660933 49678916
view BCL2L13 152 36 88 59 0 0 0.589 0.140 0.341 0.229 0.000 0.000 chr22 17633757 17735855
view BCL2L14 226 81 28 22 0 0 0.876 0.314 0.109 0.085 0.000 0.000 chr12 12065939 12104695
view BCL2L15 228 87 30 18 0 0 0.884 0.337 0.116 0.070 0.000 0.000 chr1 113871816 113892581
view BCL2L1 92 2 145 93 0 0 0.357 0.008 0.562 0.360 0.000 0.000 chr20 31659458 31727868
view BCL2L2 216 75 41 30 0 0 0.837 0.291 0.159 0.116 0.000 0.000 chr14 23301833 23316751
view BCL2 131 32 62 41 0 0 0.508 0.124 0.240 0.159 0.000 0.000 chr18 63118346 63324769
view BCL3 171 35 76 60 0 0 0.663 0.136 0.295 0.233 0.000 0.000 chr19 44743708 44765044
view BCL6B 177 50 75 49 0 0 0.686 0.194 0.291 0.190 0.000 0.000 chr17 7018050 7034644
view BCL6 201 69 46 33 2 0 0.779 0.267 0.178 0.128 0.008 0.000 chr3 187716381 187750468
view BCL7A 180 51 52 34 0 0 0.698 0.198 0.202 0.132 0.000 0.000 chr12 122016884 122067044
view BCL7B 141 43 99 52 0 0 0.547 0.167 0.384 0.202 0.000 0.000 chr7 73531356 73562690
view BCL7C 161 42 92 59 0 0 0.624 0.163 0.357 0.229 0.000 0.000 chr16 30882795 30899077
view BCL9L 124 20 113 72 0 0 0.481 0.078 0.438 0.279 0.000 0.000 chr11 118891136 118930926
view BCL9 157 51 67 41 0 0 0.609 0.198 0.260 0.159 0.000 0.000 chr1 147536501 147631216
view BCLAF1 154 54 86 40 0 0 0.597 0.209 0.333 0.155 0.000 0.000 chr6 136251627 136294846
view BCLAF3 39 2 201 91 0 0 0.151 0.008 0.779 0.353 0.000 0.000 chrX 19907860 19996061
view BCO1 200 60 41 31 0 0 0.775 0.233 0.159 0.120 0.000 0.000 chr16 81233689 81296142
view BCO2 189 62 52 33 0 0 0.733 0.240 0.202 0.128 0.000 0.000 chr11 112170512 112223946
view BCORL1 37 3 200 89 0 0 0.143 0.012 0.775 0.345 0.000 0.000 chrX 129977635 130063071
view BCOR 67 16 167 72 0 0 0.260 0.062 0.647 0.279 0.000 0.000 chrX 40046251 40102958
view BCR 147 34 69 50 0 0 0.570 0.132 0.267 0.194 0.000 0.000 chr22 23175509 23323037
view BCS1L 178 59 80 46 0 0 0.690 0.229 0.310 0.178 0.000 0.000 chr2 218654683 218668443
view BDH1 159 34 75 52 0 0 0.616 0.132 0.291 0.202 0.000 0.000 chr3 197504783 197560968
view BDH2 190 67 54 26 0 0 0.736 0.260 0.209 0.101 0.000 0.000 chr4 103072592 103104834
view BDKRB1 221 81 33 22 1 1 0.857 0.314 0.128 0.085 0.004 0.004 chr14 96251210 96269763
view BDKRB2 217 73 33 26 0 0 0.841 0.283 0.128 0.101 0.000 0.000 chr14 96199839 96249164
view BDNF 179 55 68 41 0 0 0.694 0.213 0.264 0.159 0.000 0.000 chr11 27649893 27705455
view BDP1 162 53 74 41 0 0 0.628 0.205 0.287 0.159 0.000 0.000 chr5 71450651 71572820
view BEAN1 148 39 81 51 0 0 0.574 0.151 0.314 0.198 0.000 0.000 chr16 66422295 66487833
view BECN1 136 29 115 69 0 0 0.527 0.112 0.446 0.267 0.000 0.000 chr17 42805134 42829282
view BECN2 221 76 31 24 1 0 0.857 0.295 0.120 0.093 0.004 0.000 chr1 241952767 241964062
view BEGAIN 162 44 74 46 0 0 0.628 0.171 0.287 0.178 0.000 0.000 chr14 100532147 100592417
view BEND2 84 23 164 73 0 0 0.326 0.089 0.636 0.283 0.000 0.000 chrX 18157931 18225886