Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view BAG6 213 72 42 30 0 0 0.826 0.279 0.163 0.116 0.000 0.000 chr6 31634028 31657661
view BAHCC1 165 38 58 38 0 0 0.640 0.147 0.225 0.147 0.000 0.000 chr17 81390457 81471331
view BAHD1 185 56 65 43 0 0 0.717 0.217 0.252 0.167 0.000 0.000 chr15 40435953 40473236
view BAIAP2L1 148 43 74 36 0 0 0.574 0.167 0.287 0.140 0.000 0.000 chr7 98286650 98406090
view BAIAP2L2 8 1 63 8 0 0 0.031 0.004 0.244 0.031 0.000 0.000 chr22 38079900 38115684
view BAIAP2 187 53 47 34 0 0 0.725 0.205 0.182 0.132 0.000 0.000 chr17 81030151 81122434
view BAIAP3 178 47 73 52 0 0 0.690 0.182 0.283 0.202 0.000 0.000 chr16 1328645 1354439
view BAK1 216 78 38 23 1 1 0.837 0.302 0.147 0.089 0.004 0.004 chr6 33567552 33585276
view BAMBI 217 75 39 28 0 0 0.841 0.291 0.151 0.109 0.000 0.000 chr10 28672521 28687932
view BANF1 186 60 69 42 0 0 0.721 0.233 0.267 0.163 0.000 0.000 chr11 65997503 66009149
view BANF2 199 67 52 32 0 0 0.771 0.260 0.202 0.124 0.000 0.000 chr20 17694966 17740871
view BANK1 141 40 65 38 0 0 0.547 0.155 0.252 0.147 0.000 0.000 chr4 101785730 102079812
view BANP 175 50 57 34 0 0 0.678 0.194 0.221 0.132 0.000 0.000 chr16 87946434 88082316
view BAP1 173 57 81 46 0 0 0.671 0.221 0.314 0.178 0.000 0.000 chr3 52396008 52415008
view BARD1 180 59 65 37 0 0 0.698 0.229 0.252 0.143 0.000 0.000 chr2 214720646 214814683
view BARHL1 235 86 22 18 0 0 0.911 0.333 0.085 0.070 0.000 0.000 chr9 132577606 132595252
view BARHL2 222 83 35 22 0 0 0.860 0.322 0.136 0.085 0.000 0.000 chr1 90706539 90722302
view BARX1 203 67 51 34 1 1 0.787 0.260 0.198 0.132 0.004 0.004 chr9 93946627 93960355
view BARX2 199 71 35 21 0 0 0.771 0.275 0.136 0.081 0.000 0.000 chr11 129370848 129457279
view BASP1 184 56 49 34 0 0 0.713 0.217 0.190 0.132 0.000 0.000 chr5 17212631 17281834
view BATF2 201 70 55 33 0 0 0.779 0.271 0.213 0.128 0.000 0.000 chr11 64982945 65001971
view BATF3 230 89 26 14 1 1 0.891 0.345 0.101 0.054 0.004 0.004 chr1 212681417 212704840
view BATF 187 62 60 34 1 1 0.725 0.240 0.233 0.132 0.004 0.004 chr14 75517469 75551992
view BAX 208 73 45 28 0 0 0.806 0.283 0.174 0.109 0.000 0.000 chr19 48949875 48966798
view BAZ1A 189 62 55 38 0 0 0.733 0.240 0.213 0.147 0.000 0.000 chr14 34747731 34880360
view BAZ1B 99 20 123 64 0 0 0.384 0.078 0.477 0.248 0.000 0.000 chr7 73435406 73527293
view BAZ2A 157 50 85 47 0 0 0.609 0.194 0.329 0.182 0.000 0.000 chr12 56590596 56635326
view BAZ2B 107 36 87 40 0 0 0.415 0.140 0.337 0.155 0.000 0.000 chr2 159313979 159621548
view BBC3 205 69 45 30 0 0 0.795 0.267 0.174 0.116 0.000 0.000 chr19 47215824 47236199
view BBIP1 208 82 44 19 0 0 0.806 0.318 0.171 0.074 0.000 0.000 chr10 110893730 110924180
view BBLN 197 65 56 35 0 0 0.764 0.252 0.217 0.136 0.000 0.000 chr9 128155265 128168924
view BBOF1 192 64 58 37 0 0 0.744 0.248 0.225 0.143 0.000 0.000 chr14 74014349 74071092
view BBOX1 158 45 72 47 0 0 0.612 0.174 0.279 0.182 0.000 0.000 chr11 27035815 27132809
view BBS10 207 79 47 23 0 0 0.802 0.306 0.182 0.089 0.000 0.000 chr12 76339474 76353415
view BBS12 181 57 69 43 1 0 0.702 0.221 0.267 0.167 0.004 0.000 chr4 122727704 122749939
view BBS1 192 69 60 33 0 0 0.744 0.267 0.233 0.128 0.000 0.000 chr11 66505635 66538598
view BBS2 198 76 51 24 0 0 0.767 0.295 0.198 0.093 0.000 0.000 chr16 56479385 56525024
view BBS4 198 74 48 25 0 0 0.767 0.287 0.186 0.097 0.000 0.000 chr15 72681207 72743473
view BBS5 198 76 50 22 0 0 0.767 0.295 0.194 0.085 0.000 0.000 chr2 169474494 169511655
view BBS7 186 61 63 41 0 0 0.721 0.236 0.244 0.159 0.000 0.000 chr4 121819329 121875474
view BBS9 133 35 70 45 0 0 0.516 0.136 0.271 0.174 0.000 0.000 chr7 33124564 33611069
view BBX 110 19 109 72 0 0 0.426 0.074 0.422 0.279 0.000 0.000 chr3 107517962 107816339
view BCAM 204 64 44 31 0 0 0.791 0.248 0.171 0.120 0.000 0.000 chr19 44804103 44826421
view BCAN 209 66 43 35 1 1 0.810 0.256 0.167 0.136 0.004 0.004 chr1 156637117 156664528
view BCAP29 198 69 56 33 0 0 0.767 0.267 0.217 0.128 0.000 0.000 chr7 107575246 107625478
view BCAP31 70 13 175 83 0 0 0.271 0.050 0.678 0.322 0.000 0.000 chrX 153695492 153729387
view BCAR1 195 62 46 27 0 0 0.756 0.240 0.178 0.105 0.000 0.000 chr16 75223181 75256624
view BCAR3 100 25 118 62 0 0 0.388 0.097 0.457 0.240 0.000 0.000 chr1 93556741 93686837
view BCAS1 181 66 47 24 0 0 0.702 0.256 0.182 0.093 0.000 0.000 chr20 53938541 54075594
view BCAS2 206 69 46 32 0 0 0.798 0.267 0.178 0.124 0.000 0.000 chr1 114562557 114586615