Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view BEND3 183 59 58 34 0 0 0.709 0.229 0.225 0.132 0.000 0.000 chr6 107060182 107120515
view BEND4 112 15 124 77 0 0 0.434 0.058 0.481 0.298 0.000 0.000 chr4 42105853 42157655
view BEND5 170 59 66 34 0 0 0.659 0.229 0.256 0.132 0.000 0.000 chr1 48722519 48781891
view BEND6 101 26 134 70 0 0 0.391 0.101 0.519 0.271 0.000 0.000 chr6 56950107 57032346
view BEND7 149 36 87 57 0 0 0.578 0.140 0.337 0.221 0.000 0.000 chr10 13436088 13534014
view BEST1 204 62 48 38 0 0 0.791 0.240 0.186 0.147 0.000 0.000 chr11 61945351 61969461
view BEST2 194 61 57 40 0 0 0.752 0.236 0.221 0.155 0.000 0.000 chr19 12746791 12763458
view BEST3 182 57 61 40 0 0 0.705 0.221 0.236 0.155 0.000 0.000 chr12 69648609 69704303
view BEST4 194 64 62 39 1 1 0.752 0.248 0.240 0.151 0.004 0.004 chr1 44778585 44793170
view BET1L 200 66 53 34 1 1 0.775 0.256 0.205 0.132 0.004 0.004 chr11 197924 212399
view BET1 201 72 54 32 1 0 0.779 0.279 0.209 0.124 0.004 0.000 chr7 93988245 94009355
view BEX1 106 39 144 60 2 0 0.411 0.151 0.558 0.233 0.008 0.000 chrX 103057651 103069171
view BEX2 90 32 167 72 0 0 0.349 0.124 0.647 0.279 0.000 0.000 chrX 103304346 103315990
view BEX3 84 28 168 72 0 0 0.326 0.109 0.651 0.279 0.000 0.000 chrX 103371538 103383164
view BEX4 105 38 146 61 0 0 0.407 0.147 0.566 0.236 0.000 0.000 chrX 103210108 103222246
view BEX5 100 33 155 70 0 0 0.388 0.128 0.601 0.271 0.000 0.000 chrX 102148712 102160977
view BFAR 158 44 87 52 0 0 0.612 0.171 0.337 0.202 0.000 0.000 chr16 14627951 14674236
view BFSP1 197 65 45 27 0 0 0.764 0.252 0.174 0.105 0.000 0.000 chr20 17488905 17536379
view BFSP2 137 34 93 47 0 0 0.531 0.132 0.360 0.182 0.000 0.000 chr3 133395056 133480208
view BGLAP 199 58 52 40 1 1 0.771 0.225 0.202 0.155 0.004 0.004 chr1 156237184 156248317
view BGN 99 29 152 69 0 0 0.384 0.112 0.589 0.267 0.000 0.000 chrX 153489980 153514546
view BHLHA15 227 79 30 25 0 0 0.880 0.306 0.116 0.097 0.000 0.000 chr7 98206439 98220457
view BHLHA9 220 74 30 23 0 0 0.853 0.287 0.116 0.089 0.000 0.000 chr17 1265444 1276815
view BHLHE22 215 78 43 27 0 0 0.833 0.302 0.167 0.105 0.000 0.000 chr8 64575365 64588627
view BHLHE23 222 77 31 25 1 0 0.860 0.298 0.120 0.097 0.004 0.000 chr20 63000927 63011964
view BHLHE40 217 76 37 25 1 1 0.841 0.295 0.143 0.097 0.004 0.004 chr3 4974437 4990323
view BHLHE41 210 74 46 29 0 0 0.814 0.287 0.178 0.112 0.000 0.000 chr12 26115030 26130037
view BHMT2 194 67 59 34 0 0 0.752 0.260 0.229 0.132 0.000 0.000 chr5 79064767 79095069
view BHMT 215 79 36 22 0 0 0.833 0.306 0.140 0.085 0.000 0.000 chr5 79106809 79137288
view BICC1 65 6 114 62 0 0 0.252 0.023 0.442 0.240 0.000 0.000 chr10 58507872 58836435
view BICD1 144 40 74 45 0 0 0.558 0.155 0.287 0.174 0.000 0.000 chr12 32101847 32388633
view BICD2 179 69 62 27 0 0 0.694 0.267 0.240 0.105 0.000 0.000 chr9 92706363 92769833
view BICDL1 147 52 88 41 0 0 0.570 0.202 0.341 0.159 0.000 0.000 chr12 119984236 120099494
view BICDL2 194 64 54 31 1 1 0.752 0.248 0.209 0.120 0.004 0.004 chr16 3022682 3041944
view BICRAL 134 41 89 46 0 0 0.519 0.159 0.345 0.178 0.000 0.000 chr6 42777052 42873556
view BICRA 155 35 68 51 0 0 0.601 0.136 0.264 0.198 0.000 0.000 chr19 47604134 47708277
view BID 180 47 58 43 0 0 0.698 0.182 0.225 0.167 0.000 0.000 chr22 17729138 17779469
view BIK 192 55 54 40 1 0 0.744 0.213 0.209 0.155 0.004 0.000 chr22 43105750 43134712
view BIN1 171 48 61 38 0 0 0.663 0.186 0.236 0.147 0.000 0.000 chr2 127043032 127112154
view BIN2 199 67 47 30 0 0 0.771 0.260 0.182 0.116 0.000 0.000 chr12 51276038 51329174
view BIN3 192 64 49 30 0 0 0.744 0.248 0.190 0.116 0.000 0.000 chr8 22615418 22674121
view BIRC2 171 46 68 47 0 0 0.663 0.178 0.264 0.182 0.000 0.000 chr11 102342214 102383670
view BIRC3 191 61 56 33 0 0 0.740 0.236 0.217 0.128 0.000 0.000 chr11 102312484 102344403
view BIRC5 215 71 35 27 0 0 0.833 0.275 0.136 0.105 0.000 0.000 chr17 78209253 78230635
view BIRC6 136 37 91 49 0 0 0.527 0.143 0.353 0.190 0.000 0.000 chr2 32352023 32623878
view BIRC7 149 36 85 46 0 0 0.578 0.140 0.329 0.178 0.000 0.000 chr20 63230905 63245495
view BIVM 201 71 42 25 0 0 0.779 0.275 0.163 0.097 0.000 0.000 chr13 102794119 102846533
view BLACAT1 196 57 55 41 0 0 0.760 0.221 0.213 0.159 0.000 0.000 chr1 205429886 205461045
view BLCAP 201 67 53 34 0 0 0.779 0.260 0.205 0.132 0.000 0.000 chr20 37512417 37532876
view BLID 216 77 40 27 1 0 0.837 0.298 0.155 0.105 0.004 0.000 chr11 122110340 122121215