Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view BRF1 35 1 106 38 0 0 0.136 0.004 0.411 0.147 0.000 0.000 chr14 105204286 105306001
view BRF2 189 57 64 43 1 1 0.733 0.221 0.248 0.167 0.004 0.004 chr8 37838268 37854861
view BRI3BP 204 65 40 30 0 0 0.791 0.252 0.155 0.116 0.000 0.000 chr12 124988645 125036231
view BRI3 206 74 46 26 0 0 0.798 0.287 0.178 0.101 0.000 0.000 chr7 98276686 98296545
view BRICD5 216 68 37 32 0 0 0.837 0.264 0.143 0.124 0.000 0.000 chr16 2204253 2215863
view BRINP1 117 17 89 65 0 0 0.453 0.066 0.345 0.252 0.000 0.000 chr9 119161629 119374435
view BRINP2 125 37 89 46 0 0 0.484 0.143 0.345 0.178 0.000 0.000 chr1 177165958 177287422
view BRINP3 119 28 76 45 0 0 0.461 0.109 0.295 0.174 0.000 0.000 chr1 190092658 190482864
view BRIP1 132 39 81 46 0 0 0.512 0.151 0.314 0.178 0.000 0.000 chr17 61674139 61868528
view BRIX1 219 76 38 28 0 0 0.849 0.295 0.147 0.109 0.000 0.000 chr5 34910711 34930996
view BRK1 177 53 70 42 0 0 0.686 0.205 0.271 0.163 0.000 0.000 chr3 10110675 10132190
view BRME1 161 48 79 45 0 0 0.624 0.186 0.306 0.174 0.000 0.000 chr19 13877348 13911117
view BRMS1L 186 75 58 24 0 0 0.721 0.291 0.225 0.093 0.000 0.000 chr14 35821338 35876963
view BRMS1 211 76 42 24 0 0 0.818 0.295 0.163 0.093 0.000 0.000 chr11 66332339 66350104
view BROX 192 63 58 38 0 0 0.744 0.244 0.225 0.147 0.000 0.000 chr1 222707564 222740187
view BRPF1 212 75 43 28 0 0 0.822 0.291 0.167 0.109 0.000 0.000 chr3 9726735 9753015
view BRPF3 167 57 71 38 0 0 0.647 0.221 0.275 0.147 0.000 0.000 chr6 36191744 36237790
view BRS3 74 22 182 81 0 0 0.287 0.085 0.705 0.314 0.000 0.000 chrX 136482947 136498780
view BRSK1 168 42 83 57 0 0 0.651 0.163 0.322 0.221 0.000 0.000 chr19 55278997 55317562
view BRSK2 179 51 42 26 0 0 0.694 0.198 0.163 0.101 0.000 0.000 chr11 1384934 1467689
view BRWD1 168 53 69 42 0 0 0.651 0.205 0.267 0.163 0.000 0.000 chr21 39180482 39318632
view BRWD3 71 22 165 70 0 0 0.275 0.085 0.640 0.271 0.000 0.000 chrX 80664503 80814877
view BSCL2 164 49 89 52 0 0 0.636 0.190 0.345 0.202 0.000 0.000 chr11 62685275 62712424
view BSDC1 84 10 151 79 0 0 0.326 0.039 0.585 0.306 0.000 0.000 chr1 32359633 32399441
view BSG 152 35 69 40 0 0 0.589 0.136 0.267 0.155 0.000 0.000 chr19 567596 588493
view BSND 223 85 30 17 1 0 0.864 0.329 0.116 0.066 0.004 0.000 chr1 54993933 55022172
view BSN 92 13 136 75 0 0 0.357 0.050 0.527 0.291 0.000 0.000 chr3 49549477 49676549
view BSPH1 221 80 34 22 0 0 0.857 0.310 0.132 0.085 0.000 0.000 chr19 47963046 47997170
view BSPRY 223 81 30 20 0 0 0.864 0.314 0.116 0.078 0.000 0.000 chr9 113344541 113376222
view BST1 220 82 29 17 0 0 0.853 0.318 0.112 0.066 0.000 0.000 chr4 15698065 15737787
view BST2 205 67 49 35 1 0 0.795 0.260 0.190 0.136 0.004 0.000 chr19 17397939 17410630
view BSX 210 72 47 33 1 0 0.814 0.279 0.182 0.128 0.004 0.000 chr11 122972570 122986834
view BTAF1 164 49 82 50 0 0 0.636 0.190 0.318 0.194 0.000 0.000 chr10 91918770 92036437
view BTBD10 177 60 66 33 0 0 0.686 0.233 0.256 0.128 0.000 0.000 chr11 13383008 13468222
view BTBD16 190 63 52 32 0 0 0.736 0.244 0.202 0.124 0.000 0.000 chr10 122266296 122343159
view BTBD17 221 78 33 24 2 1 0.857 0.302 0.128 0.093 0.008 0.004 chr17 74351416 74366868
view BTBD18 176 51 76 50 0 0 0.682 0.198 0.295 0.194 0.000 0.000 chr11 57738514 57756819
view BTBD19 217 75 39 28 0 0 0.841 0.291 0.151 0.109 0.000 0.000 chr1 44803523 44820585
view BTBD1 163 39 74 48 0 0 0.632 0.151 0.287 0.186 0.000 0.000 chr15 83011423 83072252
view BTBD2 181 50 57 38 0 0 0.702 0.194 0.221 0.147 0.000 0.000 chr19 1980448 2020714
view BTBD3 221 82 35 21 0 0 0.857 0.318 0.136 0.081 0.000 0.000 chr20 11912893 11931595
view BTBD6 138 38 106 63 0 0 0.535 0.147 0.411 0.244 0.000 0.000 chr14 105243533 105256093
view BTBD7 187 65 58 34 0 0 0.725 0.252 0.225 0.132 0.000 0.000 chr14 93232550 93338036
view BTBD8 78 8 151 84 0 0 0.302 0.031 0.585 0.326 0.000 0.000 chr1 92075345 92189723
view BTBD9 111 29 69 42 0 0 0.430 0.112 0.267 0.163 0.000 0.000 chr6 38163451 38644929
view BTC 179 54 59 39 0 0 0.694 0.209 0.229 0.151 0.000 0.000 chr4 74739759 74799523
view BTD 207 76 42 23 0 0 0.802 0.295 0.163 0.089 0.000 0.000 chr3 15596745 15658714
view BTF3L4 137 32 104 61 0 0 0.531 0.124 0.403 0.236 0.000 0.000 chr1 52051295 52095716
view BTF3 203 71 54 33 0 0 0.787 0.275 0.209 0.128 0.000 0.000 chr5 73493442 73510667
view BTG1 231 86 25 18 2 1 0.895 0.333 0.097 0.070 0.008 0.004 chr12 92135278 92150846