Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
Chr Start End
view ZNF512B 177 48 67 44 0 0 0.686 0.186 0.260 0.171 0.000 0.000 chr20 63951704 63974930
view ZNF512 165 53 79 44 0 0 0.640 0.205 0.306 0.171 0.000 0.000 chr2 27578042 27628217
view ZNF513 179 59 77 44 0 0 0.694 0.229 0.298 0.171 0.000 0.000 chr2 27372235 27385734
view ZNF514 182 59 73 44 0 0 0.705 0.229 0.283 0.171 0.000 0.000 chr2 95140000 95164848
view ZNF516 172 52 60 40 0 0 0.667 0.202 0.233 0.155 0.000 0.000 chr18 76352682 76500242
view ZNF517 203 65 49 35 0 0 0.787 0.252 0.190 0.136 0.000 0.000 chr8 144793913 144815084
view ZNF518A 196 66 55 35 0 0 0.760 0.256 0.213 0.136 0.000 0.000 chr10 96125297 96168759
view ZNF518B 216 78 41 26 0 0 0.837 0.302 0.159 0.101 0.000 0.000 chr4 10434880 10462426
view ZNF519 209 79 41 20 0 0 0.810 0.306 0.159 0.078 0.000 0.000 chr18 14094938 14137435
view ZNF521 107 23 77 44 0 0 0.415 0.089 0.298 0.171 0.000 0.000 chr18 25056924 25357166
view ZNF524 212 64 43 38 0 0 0.822 0.248 0.167 0.147 0.000 0.000 chr19 55595288 55608138
view ZNF525 220 78 31 22 0 0 0.853 0.302 0.120 0.085 0.000 0.000 chr19 53360705 53391590
view ZNF526 170 53 86 50 0 0 0.659 0.205 0.333 0.194 0.000 0.000 chr19 42215312 42233201
view ZNF527 198 74 58 30 0 0 0.767 0.287 0.225 0.116 0.000 0.000 chr19 37366099 37398066
view ZNF528 237 91 18 11 0 0 0.919 0.353 0.070 0.043 0.000 0.000 chr19 52392849 52423401
view ZNF529 183 59 68 41 0 0 0.709 0.229 0.264 0.159 0.000 0.000 chr19 36538613 36578292
view ZNF530 223 83 35 22 0 0 0.864 0.322 0.136 0.085 0.000 0.000 chr19 57594885 57615098
view ZNF532 176 57 57 35 0 0 0.682 0.221 0.221 0.136 0.000 0.000 chr18 58859877 58991480
view ZNF534 233 84 22 19 2 1 0.903 0.326 0.085 0.074 0.008 0.004 chr19 52424148 52447499
view ZNF536 105 19 75 43 0 0 0.407 0.074 0.291 0.167 0.000 0.000 chr19 30367384 30563059
view ZNF540 172 56 80 47 0 0 0.667 0.217 0.310 0.182 0.000 0.000 chr19 37589876 37619179
view ZNF541 148 37 95 56 0 0 0.574 0.143 0.368 0.217 0.000 0.000 chr19 47515690 47578148
view ZNF543 229 88 26 14 0 0 0.888 0.341 0.101 0.054 0.000 0.000 chr19 57315472 57335770
view ZNF544 196 59 53 38 0 0 0.760 0.229 0.205 0.147 0.000 0.000 chr19 58223914 58268644
view ZNF546 121 34 126 64 0 0 0.469 0.132 0.488 0.248 0.000 0.000 chr19 39992060 40026038
view ZNF547 200 72 49 28 0 0 0.775 0.279 0.190 0.109 0.000 0.000 chr19 57358551 57384565
view ZNF548 212 80 42 22 0 0 0.822 0.310 0.163 0.085 0.000 0.000 chr19 57384854 57407992
view ZNF549 196 64 55 34 0 0 0.760 0.248 0.213 0.132 0.000 0.000 chr19 57522356 57545876
view ZNF550 204 69 49 32 0 0 0.791 0.267 0.190 0.124 0.000 0.000 chr19 57536838 57564863
view ZNF551 219 82 35 19 0 0 0.849 0.318 0.136 0.074 0.000 0.000 chr19 57676977 57695648
view ZNF552 216 70 41 34 0 0 0.837 0.271 0.159 0.132 0.000 0.000 chr19 57802082 57819913
view ZNF554 204 72 46 28 1 0 0.791 0.279 0.178 0.109 0.004 0.000 chr19 2814868 2841735
view ZNF555 177 56 67 40 0 0 0.686 0.217 0.260 0.155 0.000 0.000 chr19 2836475 2865471
view ZNF556 223 75 28 23 1 1 0.864 0.291 0.109 0.089 0.004 0.004 chr19 2862335 2888445
view ZNF557 215 70 32 25 0 0 0.833 0.271 0.124 0.097 0.000 0.000 chr19 7064703 7092968
view ZNF558 213 76 32 21 0 0 0.826 0.295 0.124 0.081 0.000 0.000 chr19 8801170 8837304
view ZNF559 196 63 53 34 0 0 0.760 0.244 0.205 0.132 0.000 0.000 chr19 9319179 9350871
view ZNF560 204 65 47 34 0 0 0.791 0.252 0.182 0.132 0.000 0.000 chr19 9461355 9503616
view ZNF561 192 55 59 43 0 0 0.744 0.213 0.229 0.167 0.000 0.000 chr19 9602329 9626232
view ZNF562 144 31 85 51 0 0 0.558 0.120 0.329 0.198 0.000 0.000 chr19 9636807 9680100
view ZNF563 183 58 68 41 0 0 0.709 0.225 0.264 0.159 0.000 0.000 chr19 12312477 12338633
view ZNF564 205 70 39 23 0 0 0.795 0.271 0.151 0.089 0.000 0.000 chr19 12520373 12556482
view ZNF565 192 62 55 34 0 0 0.744 0.240 0.213 0.132 0.000 0.000 chr19 36177276 36219665
view ZNF566 150 41 89 55 0 0 0.581 0.159 0.345 0.213 0.000 0.000 chr19 36440119 36494561
view ZNF567 192 63 56 34 0 0 0.744 0.244 0.217 0.132 0.000 0.000 chr19 36682612 36726336
view ZNF568 172 49 71 44 0 0 0.667 0.190 0.275 0.171 0.000 0.000 chr19 36911332 36957734
view ZNF569 186 69 63 32 0 0 0.721 0.267 0.244 0.124 0.000 0.000 chr19 37406157 37472444
view ZNF570 189 66 66 37 0 0 0.733 0.256 0.256 0.143 0.000 0.000 chr19 37464356 37493652
view ZNF571 170 58 81 43 0 0 0.659 0.225 0.314 0.167 0.000 0.000 chr19 37559260 37599792
view ZNF572 193 73 65 32 0 0 0.748 0.283 0.252 0.124 0.000 0.000 chr8 124968295 124984389