Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
Chr Start End
view ZNF629 143 34 106 62 0 0 0.554 0.132 0.411 0.240 0.000 0.000 chr16 30773456 30792205
view ZNF630 78 18 168 79 3 0 0.302 0.070 0.651 0.306 0.012 0.000 chrX 48052516 48076640
view ZNF638 173 56 68 42 0 0 0.671 0.217 0.264 0.163 0.000 0.000 chr2 71326782 71440061
view ZNF639 206 70 48 31 0 0 0.798 0.271 0.186 0.120 0.000 0.000 chr3 179318031 179343583
view ZNF641 203 73 47 27 0 0 0.787 0.283 0.182 0.105 0.000 0.000 chr12 48332180 48355919
view ZNF644 156 43 76 47 0 0 0.605 0.167 0.295 0.182 0.000 0.000 chr1 90910304 91027035
view ZNF646 164 41 88 59 0 0 0.636 0.159 0.341 0.229 0.000 0.000 chr16 31069422 31089196
view ZNF648 178 67 75 34 0 0 0.690 0.260 0.291 0.132 0.000 0.000 chr1 182049570 182066712
view ZNF649 189 55 61 45 0 0 0.733 0.213 0.236 0.174 0.000 0.000 chr19 51884235 51910017
view ZNF652 190 69 55 27 0 0 0.736 0.267 0.213 0.105 0.000 0.000 chr17 49284206 49367250
view ZNF653 165 40 83 55 0 0 0.640 0.155 0.322 0.213 0.000 0.000 chr19 11478429 11510839
view ZNF654 109 24 116 62 0 0 0.422 0.093 0.450 0.240 0.000 0.000 chr3 88054255 88149660
view ZNF655 183 55 71 47 1 1 0.709 0.213 0.275 0.182 0.004 0.004 chr7 99553642 99581453
view ZNF658 211 76 30 17 10 9 0.818 0.295 0.116 0.066 0.039 0.035 chr9 66895725 66926426
view ZNF660 152 29 101 74 0 0 0.589 0.112 0.391 0.287 0.000 0.000 chr3 44579964 44604694
view ZNF662 190 57 61 43 0 0 0.736 0.221 0.236 0.167 0.000 0.000 chr3 42901142 42924334
view ZNF664 144 36 97 58 0 0 0.558 0.140 0.376 0.225 0.000 0.000 chr12 123968215 124020427
view ZNF665 203 70 40 26 0 0 0.787 0.271 0.155 0.101 0.000 0.000 chr19 53157424 53198358
view ZNF667 180 51 61 43 0 0 0.698 0.198 0.236 0.167 0.000 0.000 chr19 56434329 56482345
view ZNF668 148 29 99 68 0 0 0.574 0.112 0.384 0.264 0.000 0.000 chr16 31055847 31079240
view ZNF669 195 60 56 40 1 0 0.756 0.233 0.217 0.155 0.004 0.000 chr1 247094962 247109356
view ZNF66 198 69 53 32 0 0 0.767 0.267 0.205 0.124 0.000 0.000 chr19 20771304 20814995
view ZNF670 162 42 79 50 0 0 0.628 0.163 0.306 0.194 0.000 0.000 chr1 247029637 247083811
view ZNF671 212 78 46 27 0 0 0.822 0.302 0.178 0.105 0.000 0.000 chr19 57714751 57732624
view ZNF672 214 81 43 23 0 0 0.829 0.314 0.167 0.089 0.000 0.000 chr1 248833224 248854517
view ZNF674 77 23 169 72 0 0 0.298 0.089 0.655 0.279 0.000 0.000 chrX 46492725 46550421
view ZNF675 187 73 56 25 0 0 0.725 0.283 0.217 0.097 0.000 0.000 chr19 23647801 23692212
view ZNF676 219 81 37 22 0 0 0.849 0.314 0.143 0.085 0.000 0.000 chr19 22174089 22201951
view ZNF677 202 66 47 33 0 0 0.783 0.256 0.182 0.128 0.000 0.000 chr19 53230381 53259873
view ZNF678 196 65 51 32 0 0 0.760 0.252 0.198 0.124 0.000 0.000 chr1 227558556 227667461
view ZNF679 210 73 44 29 0 0 0.814 0.283 0.171 0.112 0.000 0.000 chr7 64223474 64271931
view ZNF680 191 66 59 34 0 0 0.740 0.256 0.229 0.132 0.000 0.000 chr7 64514878 64568071
view ZNF681 196 69 52 32 0 0 0.760 0.267 0.202 0.124 0.000 0.000 chr19 23734195 23763891
view ZNF682 191 67 60 34 0 0 0.740 0.260 0.233 0.132 0.000 0.000 chr19 19999418 20044505
view ZNF683 202 67 47 32 2 1 0.783 0.260 0.182 0.124 0.008 0.004 chr1 26356634 26377750
view ZNF684 191 62 61 39 1 0 0.740 0.240 0.236 0.151 0.004 0.000 chr1 40526637 40553167
view ZNF687 187 61 67 42 0 0 0.725 0.236 0.260 0.163 0.000 0.000 chr1 151277299 151297176
view ZNF688 149 40 104 62 2 0 0.578 0.155 0.403 0.240 0.008 0.000 chr16 30564726 30576714
view ZNF689 168 43 84 57 0 0 0.651 0.167 0.326 0.221 0.000 0.000 chr16 30597558 30615389
view ZNF691 221 90 35 14 0 0 0.857 0.349 0.136 0.054 0.000 0.000 chr1 42841613 42857477
view ZNF692 205 79 48 21 0 0 0.795 0.306 0.186 0.081 0.000 0.000 chr1 248845008 248864085
view ZNF695 133 19 114 77 0 0 0.516 0.074 0.442 0.298 0.000 0.000 chr1 246980323 247013057
view ZNF696 216 73 39 29 0 0 0.837 0.283 0.151 0.112 0.000 0.000 chr8 143286417 143304952
view ZNF697 196 60 53 37 0 0 0.760 0.233 0.205 0.143 0.000 0.000 chr1 119614377 119653266
view ZNF699 196 64 57 37 0 0 0.760 0.248 0.221 0.143 0.000 0.000 chr19 9286140 9314838
view ZNF69 196 67 58 36 0 0 0.760 0.260 0.225 0.140 0.000 0.000 chr19 11882782 11911696
view ZNF700 174 47 79 56 0 0 0.674 0.182 0.306 0.217 0.000 0.000 chr19 11920107 11955763
view ZNF701 227 82 24 18 0 0 0.880 0.318 0.093 0.070 0.000 0.000 chr19 52565287 52592174
view ZNF703 133 28 111 64 1 0 0.516 0.109 0.430 0.248 0.004 0.000 chr8 37690782 37705019
view ZNF704 58 1 148 87 0 0 0.225 0.004 0.574 0.337 0.000 0.000 chr8 80623451 80879781