Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view CAPNS2 205 81 51 24 1 0 0.795 0.314 0.198 0.093 0.004 0.000 chr16 55561684 55572687
view CAPRIN1 122 19 97 62 0 0 0.473 0.074 0.376 0.240 0.000 0.000 chr11 34046731 34107610
view CAPRIN2 188 71 56 27 0 0 0.729 0.275 0.217 0.105 0.000 0.000 chr12 30704553 30759951
view CAPS2 184 57 61 37 0 0 0.713 0.221 0.236 0.143 0.000 0.000 chr12 75270979 75335324
view CAPSL 200 66 50 32 0 0 0.775 0.256 0.194 0.124 0.000 0.000 chr5 35899288 35943622
view CAPS 197 63 60 41 0 0 0.764 0.244 0.233 0.159 0.000 0.000 chr19 5909254 5921211
view CAPZA1 183 73 63 27 0 0 0.709 0.283 0.244 0.105 0.000 0.000 chr1 112614832 112676616
view CAPZA2 176 61 66 36 0 0 0.682 0.236 0.256 0.140 0.000 0.000 chr7 116857587 116927049
view CAPZA3 195 70 62 35 1 0 0.756 0.271 0.240 0.136 0.004 0.000 chr12 18733119 18744188
view CAPZB 181 62 53 32 0 0 0.702 0.240 0.205 0.124 0.000 0.000 chr1 19333775 19490539
view CARD10 137 36 92 50 1 1 0.531 0.140 0.357 0.194 0.004 0.004 chr22 37485362 37524415
view CARD11 160 35 49 36 0 0 0.620 0.136 0.190 0.140 0.000 0.000 chr7 2901142 3048867
view CARD14 187 51 55 39 0 0 0.725 0.198 0.213 0.151 0.000 0.000 chr17 80165030 80214331
view CARD16 225 83 31 20 0 0 0.872 0.322 0.120 0.078 0.000 0.000 chr11 105036563 105050335
view CARD18 215 75 40 28 1 0 0.833 0.291 0.155 0.109 0.004 0.000 chr11 105132714 105144769
view CARD19 178 52 72 47 0 0 0.690 0.202 0.279 0.182 0.000 0.000 chr9 93091217 93118283
view CARD6 219 79 37 24 0 0 0.849 0.306 0.143 0.093 0.000 0.000 chr5 40836367 40860354
view CARD8 180 56 65 39 0 0 0.698 0.217 0.252 0.151 0.000 0.000 chr19 48203086 48260912
view CARD9 202 60 46 35 1 1 0.783 0.233 0.178 0.136 0.004 0.004 chr9 136358956 136378669
view CARF 166 54 80 45 0 0 0.643 0.209 0.310 0.174 0.000 0.000 chr2 202907275 202993263
view CARHSP1 234 81 22 22 1 1 0.907 0.314 0.085 0.085 0.004 0.004 chr16 8847947 8874006
view CARM1 176 61 64 36 0 0 0.682 0.236 0.248 0.140 0.000 0.000 chr19 10866553 10928075
view CARMIL1 92 18 83 46 0 0 0.357 0.070 0.322 0.178 0.000 0.000 chr6 25274374 25625530
view CARMIL2 140 31 107 68 0 0 0.543 0.120 0.415 0.264 0.000 0.000 chr16 67640144 67662569
view CARMIL3 206 68 46 32 0 0 0.798 0.264 0.178 0.124 0.000 0.000 chr14 24047009 24074729
view CARNMT1 182 62 70 38 0 0 0.705 0.240 0.271 0.147 0.000 0.000 chr9 74975790 75033293
view CARNS1 172 47 76 50 2 1 0.667 0.182 0.295 0.194 0.008 0.004 chr11 67410678 67430604
view CARS1 160 39 87 61 0 0 0.620 0.151 0.337 0.236 0.000 0.000 chr11 2995929 3062423
view CARS2 185 62 61 38 0 0 0.717 0.240 0.236 0.147 0.000 0.000 chr13 110636417 110711116
view CARTPT 236 90 19 13 2 1 0.915 0.349 0.074 0.050 0.008 0.004 chr5 71714275 71726045
view CASC3 132 30 109 63 0 0 0.512 0.116 0.422 0.244 0.000 0.000 chr17 40135537 40177171
view CASD1 198 81 48 20 1 1 0.767 0.314 0.186 0.078 0.004 0.004 chr7 94504809 94562019
view CASKIN1 174 49 67 40 0 0 0.674 0.190 0.260 0.155 0.000 0.000 chr16 2172180 2201605
view CASKIN2 206 64 48 37 0 0 0.798 0.248 0.186 0.143 0.000 0.000 chr17 75495261 75520537
view CASK 19 4 202 88 0 0 0.074 0.016 0.783 0.341 0.000 0.000 chrX 41509934 41928554
view CASP10 160 37 86 59 0 0 0.620 0.143 0.333 0.229 0.000 0.000 chr2 201178141 201226665
view CASP14 213 74 44 30 0 0 0.826 0.287 0.171 0.116 0.000 0.000 chr19 15044480 15063293
view CASP1 198 66 51 31 1 0 0.767 0.256 0.198 0.120 0.004 0.000 chr11 105020508 105040144
view CASP2 122 23 124 75 0 0 0.473 0.089 0.481 0.291 0.000 0.000 chr7 143283351 143312696
view CASP3 182 54 69 45 0 0 0.705 0.209 0.267 0.174 0.000 0.000 chr4 184622696 184654447
view CASP4 178 56 73 43 0 0 0.690 0.217 0.283 0.167 0.000 0.000 chr11 104937866 104973574
view CASP5 197 61 51 37 0 0 0.764 0.236 0.198 0.143 0.000 0.000 chr11 104989243 105028168
view CASP6 207 73 47 30 0 0 0.802 0.283 0.182 0.116 0.000 0.000 chr4 109683628 109708445
view CASP7 202 65 41 31 0 0 0.783 0.252 0.159 0.120 0.000 0.000 chr10 113674912 113735905
view CASP8 192 68 59 31 0 0 0.744 0.264 0.229 0.120 0.000 0.000 chr2 201255536 201292709
view CASP9 174 54 72 44 0 0 0.674 0.209 0.279 0.171 0.000 0.000 chr1 15486401 15529215
view CASQ1 219 79 35 22 0 0 0.849 0.306 0.136 0.085 0.000 0.000 chr1 160185575 160206886
view CASQ2 181 63 64 34 0 0 0.702 0.244 0.248 0.132 0.000 0.000 chr1 115695021 115773714
view CASR 156 43 79 51 0 0 0.605 0.167 0.306 0.198 0.000 0.000 chr3 122178668 122296629
view CASS4 187 55 51 34 0 0 0.725 0.213 0.198 0.132 0.000 0.000 chr20 56407260 56465382