Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view CD44 188 65 39 24 0 0 0.729 0.252 0.151 0.093 0.000 0.000 chr11 35134171 35237402
view CD46 189 62 55 32 0 0 0.733 0.240 0.213 0.124 0.000 0.000 chr1 207747054 207800504
view CD47 192 66 61 34 0 0 0.744 0.256 0.236 0.132 0.000 0.000 chr3 108038091 108096031
view CD48 220 78 32 24 0 0 0.853 0.302 0.124 0.093 0.000 0.000 chr1 160673746 160716822
view CD4 220 80 23 13 0 0 0.853 0.310 0.089 0.050 0.000 0.000 chr12 6784528 6825799
view CD52 201 67 54 36 2 1 0.779 0.260 0.209 0.140 0.008 0.004 chr1 26312958 26325523
view CD53 220 84 34 18 0 0 0.853 0.326 0.132 0.070 0.000 0.000 chr1 110868148 110904922
view CD55 177 62 70 35 0 0 0.686 0.240 0.271 0.136 0.000 0.000 chr1 207316678 207365966
view CD58 143 35 93 56 0 0 0.554 0.136 0.360 0.217 0.000 0.000 chr1 116509534 116576026
view CD59 189 64 63 39 0 0 0.733 0.248 0.244 0.151 0.000 0.000 chr11 33698010 33741423
view CD5L 213 78 41 23 1 1 0.826 0.302 0.159 0.089 0.004 0.004 chr1 157825911 157846808
view CD5 121 15 121 78 0 0 0.469 0.058 0.469 0.302 0.000 0.000 chr11 61097489 61132852
view CD63 211 72 43 30 0 0 0.818 0.279 0.167 0.116 0.000 0.000 chr12 55720323 55734009
view CD68 216 78 39 25 0 0 0.837 0.302 0.151 0.097 0.000 0.000 chr17 7574638 7587111
view CD69 224 85 30 17 0 0 0.868 0.329 0.116 0.066 0.000 0.000 chr12 9747486 9765901
view CD6 150 31 80 53 0 0 0.581 0.120 0.310 0.205 0.000 0.000 chr11 60966680 61025377
view CD70 227 79 31 26 0 0 0.880 0.306 0.120 0.101 0.000 0.000 chr19 6580839 6596150
view CD72 194 62 59 38 1 1 0.752 0.240 0.229 0.147 0.004 0.004 chr9 35604982 35623413
view CD74 203 62 47 37 1 0 0.787 0.240 0.182 0.143 0.004 0.000 chr5 150396639 150417910
view CD79A 195 76 60 27 0 0 0.756 0.295 0.233 0.105 0.000 0.000 chr19 41872279 41886372
view CD79B 189 62 67 43 1 0 0.733 0.240 0.260 0.167 0.004 0.000 chr17 63923740 63937331
view CD7 207 67 47 34 0 0 0.802 0.260 0.182 0.132 0.000 0.000 chr17 82309873 82322608
view CD80 212 70 38 30 0 0 0.822 0.271 0.147 0.116 0.000 0.000 chr3 119519293 119564614
view CD81 193 61 55 36 0 0 0.748 0.236 0.213 0.140 0.000 0.000 chr11 2372310 2402397
view CD82 185 50 49 38 0 0 0.717 0.194 0.190 0.147 0.000 0.000 chr11 44560663 44625358
view CD83 218 72 32 27 1 0 0.845 0.279 0.124 0.105 0.004 0.000 chr6 14112772 14141906
view CD84 189 64 56 31 0 0 0.733 0.248 0.217 0.120 0.000 0.000 chr1 160536098 160584496
view CD86 151 37 82 53 0 0 0.585 0.143 0.318 0.205 0.000 0.000 chr3 122050362 122126136
view CD8A 188 59 67 43 0 0 0.729 0.229 0.260 0.167 0.000 0.000 chr2 86779610 86795913
view CD8B2 174 46 68 44 0 0 0.674 0.178 0.264 0.171 0.000 0.000 chr2 106482364 106516095
view CD8B 195 66 57 35 0 0 0.756 0.256 0.221 0.136 0.000 0.000 chr2 86833167 86866886
view CD93 202 70 55 34 0 0 0.783 0.271 0.213 0.132 0.000 0.000 chr20 23074360 23091324
view CD96 149 47 80 45 0 0 0.578 0.182 0.310 0.174 0.000 0.000 chr3 111537197 111657372
view CD99L2 42 4 191 89 0 0 0.163 0.016 0.740 0.345 0.000 0.000 chrX 150761336 150903668
view CD99 212 67 35 31 0 0 0.822 0.260 0.136 0.120 0.000 0.000 chrX 2686295 2746309
view CD9 188 69 54 27 0 0 0.729 0.267 0.209 0.105 0.000 0.000 chr12 6195400 6243266
view CDADC1 183 64 67 35 0 0 0.709 0.248 0.260 0.136 0.000 0.000 chr13 49242925 49298485
view CDAN1 173 57 79 44 0 0 0.671 0.221 0.306 0.171 0.000 0.000 chr15 42718544 42742128
view CDA 208 72 39 25 0 0 0.806 0.279 0.151 0.097 0.000 0.000 chr1 20584097 20623903
view CDC123 195 65 47 31 0 0 0.756 0.252 0.182 0.120 0.000 0.000 chr10 12191188 12255589
view CDC14A 152 45 71 41 0 0 0.589 0.174 0.275 0.159 0.000 0.000 chr1 100347506 100525277
view CDC14B 109 16 112 71 0 0 0.422 0.062 0.434 0.275 0.000 0.000 chr9 96495113 96624843
view CDC14C 230 89 26 15 1 0 0.891 0.345 0.101 0.058 0.004 0.000 chr7 48919547 48932454
view CDC16 189 64 59 34 0 0 0.733 0.248 0.229 0.132 0.000 0.000 chr13 114229897 114277723
view CDC20B 164 57 78 40 0 0 0.636 0.221 0.302 0.155 0.000 0.000 chr5 55107971 55178177
view CDC20 183 59 71 43 0 0 0.709 0.229 0.275 0.167 0.000 0.000 chr1 43353981 43368203
view CDC23 195 63 58 39 0 0 0.756 0.244 0.225 0.151 0.000 0.000 chr5 138182650 138218323
view CDC25A 169 53 77 42 0 0 0.655 0.205 0.298 0.163 0.000 0.000 chr3 48152146 48193417
view CDC25B 217 75 36 25 0 0 0.841 0.291 0.140 0.097 0.000 0.000 chr20 3791310 3811115
view CDC25C 180 62 65 35 0 0 0.698 0.240 0.252 0.136 0.000 0.000 chr5 138280269 138336804