Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view CDH6 168 60 57 28 0 0 0.651 0.233 0.221 0.109 0.000 0.000 chr5 31188686 31334146
view CDH7 103 12 97 56 0 0 0.399 0.047 0.376 0.217 0.000 0.000 chr18 65746012 65895337
view CDH8 83 22 109 52 0 0 0.322 0.085 0.422 0.202 0.000 0.000 chr16 61642250 62041438
view CDH9 119 27 85 52 0 0 0.461 0.105 0.329 0.202 0.000 0.000 chr5 26875597 27043586
view CDHR1 193 65 59 36 0 0 0.748 0.252 0.229 0.140 0.000 0.000 chr10 84189537 84223694
view CDHR2 171 49 72 46 0 0 0.663 0.190 0.279 0.178 0.000 0.000 chr5 176544342 176600824
view CDHR3 178 59 55 31 0 0 0.690 0.229 0.213 0.120 0.000 0.000 chr7 105958264 106041432
view CDHR4 176 53 72 46 1 0 0.682 0.205 0.279 0.178 0.004 0.000 chr3 49785732 49804873
view CDHR5 204 61 48 38 1 1 0.791 0.236 0.186 0.147 0.004 0.004 chr11 611583 629955
view CDIN1 118 20 83 52 0 0 0.457 0.078 0.322 0.202 0.000 0.000 chr15 36574626 36815244
view CDIP1 161 48 88 50 0 0 0.624 0.186 0.341 0.194 0.000 0.000 chr16 4505669 4543773
view CDIPT 159 43 93 59 0 0 0.616 0.167 0.360 0.229 0.000 0.000 chr16 29853357 29868226
view CDK10 210 65 44 36 0 0 0.814 0.252 0.171 0.140 0.000 0.000 chr16 89681689 89701354
view CDK11A 185 74 68 28 0 0 0.717 0.287 0.264 0.109 0.000 0.000 chr1 1697379 1729357
view CDK11B 222 81 33 21 0 0 0.860 0.314 0.128 0.081 0.000 0.000 chr1 1630225 1664004
view CDK12 129 26 107 66 0 0 0.500 0.101 0.415 0.256 0.000 0.000 chr17 39456486 39539544
view CDK13 160 45 73 43 0 0 0.620 0.174 0.283 0.167 0.000 0.000 chr7 39945256 40104580
view CDK14 83 8 92 55 0 0 0.322 0.031 0.357 0.213 0.000 0.000 chr7 90591321 91215590
view CDK15 160 44 77 47 0 0 0.620 0.171 0.298 0.182 0.000 0.000 chr2 201801537 201900550
view CDK16 92 24 162 77 0 0 0.357 0.093 0.628 0.298 0.000 0.000 chrX 47213681 47234997
view CDK17 172 43 73 53 0 0 0.667 0.167 0.283 0.205 0.000 0.000 chr12 96273261 96405439
view CDK18 193 56 51 37 0 0 0.748 0.217 0.198 0.143 0.000 0.000 chr1 205499669 205537790
view CDK19 149 52 87 43 0 0 0.578 0.202 0.337 0.167 0.000 0.000 chr6 110604978 110820469
view CDK1 228 86 29 18 0 0 0.884 0.333 0.112 0.070 0.000 0.000 chr10 60773478 60799852
view CDK20 219 84 36 20 2 0 0.849 0.326 0.140 0.078 0.008 0.000 chr9 87961441 87979533
view CDK2AP1 163 39 91 62 0 0 0.632 0.151 0.353 0.240 0.000 0.000 chr12 123255976 123276856
view CDK2AP2 157 36 96 65 0 0 0.609 0.140 0.372 0.252 0.000 0.000 chr11 67501497 67513162
view CDK2 204 63 47 36 1 1 0.791 0.244 0.182 0.140 0.004 0.004 chr12 55961830 55977789
view CDK3 194 58 58 42 0 0 0.752 0.225 0.225 0.163 0.000 0.000 chr17 75995855 76010998
view CDK4 181 48 68 50 2 1 0.702 0.186 0.264 0.194 0.008 0.004 chr12 57742727 57757310
view CDK5R1 202 65 54 39 0 0 0.783 0.252 0.209 0.151 0.000 0.000 chr17 32481993 32496253
view CDK5R2 193 70 62 33 1 0 0.748 0.271 0.240 0.128 0.004 0.000 chr2 218954666 218967155
view CDK5RAP1 178 62 70 35 0 0 0.690 0.240 0.271 0.136 0.000 0.000 chr20 33353839 33406519
view CDK5RAP2 115 35 97 50 0 0 0.446 0.136 0.376 0.194 0.000 0.000 chr9 120383875 120585167
view CDK5RAP3 196 63 54 38 1 0 0.760 0.244 0.209 0.147 0.004 0.000 chr17 47966113 47986781
view CDK5 207 69 46 32 0 0 0.802 0.267 0.178 0.124 0.000 0.000 chr7 151048815 151062897
view CDK6 61 12 140 78 0 0 0.236 0.047 0.543 0.302 0.000 0.000 chr7 92599921 92841573
view CDK7 187 64 57 33 0 0 0.725 0.248 0.221 0.128 0.000 0.000 chr5 69229886 69282430
view CDK8 163 48 80 51 0 0 0.632 0.186 0.310 0.198 0.000 0.000 chr13 26249129 26410238
view CDK9 205 70 49 31 0 0 0.795 0.271 0.190 0.120 0.000 0.000 chr9 127781034 127795792
view CDKAL1 97 20 68 40 0 0 0.376 0.078 0.264 0.155 0.000 0.000 chr6 20529457 21237404
view CDKL1 152 31 76 54 0 0 0.589 0.120 0.295 0.209 0.000 0.000 chr14 50321265 50401881
view CDKL2 152 39 92 58 0 0 0.589 0.151 0.357 0.225 0.000 0.000 chr4 75571496 75635528
view CDKL3 104 17 118 68 0 0 0.403 0.066 0.457 0.264 0.000 0.000 chr5 134293424 134372171
view CDKL4 144 43 90 50 0 0 0.558 0.167 0.349 0.194 0.000 0.000 chr2 39170646 39248970
view CDKL5 33 5 199 90 0 0 0.128 0.019 0.771 0.349 0.000 0.000 chrX 18420608 18645196
view CDKN1A 226 86 30 18 0 0 0.876 0.333 0.116 0.070 0.000 0.000 chr6 36673714 36692332
view CDKN1B 220 87 37 17 0 0 0.853 0.337 0.143 0.066 0.000 0.000 chr12 12712368 12727369
view CDKN1C 208 67 41 29 1 1 0.806 0.260 0.159 0.112 0.004 0.004 chr11 2878218 2890775
view CDKN2AIPNL 189 64 67 39 0 0 0.733 0.248 0.260 0.151 0.000 0.000 chr5 134397065 134416881