Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CMYA5_chr5_79684836_79805222	79689907	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0013 a0003c0003t0013	a0003c0003t0013g0090 a0003c0003t0013g0090	1	358	0.0028	0	c.-1G others(2): Show c.-1G>A	CMYA5	ENSG00000164309.15	transcript	ENST00000446378.3	protein_coding	1/13	1		chr5	TogoVar
CNBP_chr3_129162827_129188896	129183844	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp1 HG02257.hp2 HG02647.hp2 HG01884.hp1 HG02257.hp2 HG02647.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0017 a0001c0002t0040 a0001c0002t0017 a0001c0002t0040	a0001c0002t0017g0377 a0001c0002t0017g0378 a0001c0002t0040g0376 a0001c0002t0017g0377 a0001c0002t0017g0378 a0001c0002t0040g0376	3	430	0.0070	0	c.-83 others(3): Show c.-83C>T	CNBP	ENSG00000169714.17	transcript	ENST00000422453.7	protein_coding	1/5	12087		chr3	TogoVar
CNDP1_chr18_74529500_74592212	74534541	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0219 a0001c0001t0022g0219	1	390	0.0026	0	c.-12 others(4): Show c.-127G>A	CNDP1	ENSG00000150656.15	transcript	ENST00000358821.8	protein_coding	1/12	127		chr18	TogoVar
CNDP2_chr18_74491363_74528454	74496370	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0023 a0001c0003t0023	a0001c0003t0023g0036 a0001c0003t0023g0036	1	424	0.0024	0	c.-15 others(4): Show c.-154C>A	CNDP2	ENSG00000133313.15	transcript	ENST00000324262.9	protein_coding	1/12	3604		chr18	TogoVar
CNDP2_chr18_74491363_74528454	74496379	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0015 a0001c0001t0049g0015	1	424	0.0024	0	c.-14 others(4): Show c.-145C>G	CNDP2	ENSG00000133313.15	transcript	ENST00000324262.9	protein_coding	1/12	3595		chr18	TogoVar
CNDP2_chr18_74491363_74528454	74499885	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03669.hp1 HG03688.hp1 HG03669.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0248 a0001c0001t0015g0249 a0001c0001t0015g0248 a0001c0001t0015g0249	2	424	0.0047	0	c.-89 others(3): Show c.-89G>A	CNDP2	ENSG00000133313.15	transcript	ENST00000324262.9	protein_coding	2/12	89		chr18	TogoVar
CNDP2_chr18_74491363_74528454	74499889	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00323.hp1 HG00544.hp1 HG00597.hp2 others(158): Show HG00323.hp1 HG00544.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01358.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp1 HG02257.hp2 HG02258.hp2 HG02300.hp1 HG02451.hp1 HG02486.hp2 HG02523.hp2 HG02572.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18612.hp2 NA18906.hp1 NA18940.hp2 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18951.hp1 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18957.hp2 NA18961.hp1 NA18962.hp1 NA18964.hp2 NA18967.hp1 NA18979.hp2 NA18981.hp1 NA18987.hp1 NA18988.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18998.hp1 NA19000.hp2 NA19001.hp1 NA19002.hp1 NA19010.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp2 NA19067.hp2 NA19077.hp1 NA19079.hp1 NA19081.hp1 NA19086.hp1 NA19089.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0007 a0008	a0001c0001 a0001c0003 a0001c0005 others(9): Show a0001c0001 a0001c0003 a0001c0005 a0001c0016 a0001c0017 a0002c0002 a0002c0006 a0002c0007 a0003c0004 a0006c0013 a0007c0011 a0008c0012	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(36): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0037 a0001c0001t0038 a0001c0001t0042 a0001c0001t0046 a0001c0003t0002 a0001c0003t0006 a0001c0003t0007 a0001c0003t0009 a0001c0003t0021 a0001c0003t0023 a0001c0003t0048 a0001c0005t0002 a0001c0016t0009 a0001c0017t0002 a0002c0002t0002 a0002c0002t0006 a0002c0002t0007 a0002c0002t0010 a0002c0002t0022 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041 a0002c0002t0043 a0002c0002t0044 a0002c0002t0045 a0002c0002t0047 a0002c0006t0002 a0002c0007t0002 a0003c0004t0005 a0003c0004t0009 a0006c0013t0002 a0007c0011t0002 a0008c0012t0007	a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0037 others(127): Show a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0063 a0001c0001t0002g0080 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0145 a0001c0001t0002g0147 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0169 a0001c0001t0002g0172 a0001c0001t0005g0068 a0001c0001t0005g0144 a0001c0001t0005g0146 a0001c0001t0006g0027 a0001c0001t0006g0071 a0001c0001t0007g0076 a0001c0001t0009g0074 a0001c0001t0009g0168 a0001c0001t0009g0170 a0001c0001t0009g0171 a0001c0001t0010g0064 a0001c0001t0010g0075 a0001c0001t0037g0070 a0001c0001t0038g0148 a0001c0001t0042g0082 a0001c0001t0046g0077 a0001c0003t0002g0036 a0001c0003t0002g0116 a0001c0003t0002g0122 a0001c0003t0002g0151 a0001c0003t0002g0192 a0001c0003t0002g0193 a0001c0003t0002g0194 a0001c0003t0002g0195 a0001c0003t0006g0045 a0001c0003t0007g0044 a0001c0003t0007g0123 a0001c0003t0007g0138 a0001c0003t0007g0191 a0001c0003t0009g0061 a0001c0003t0021g0035 a0001c0003t0023g0036 a0001c0003t0048g0152 a0001c0005t0002g0046 a0001c0005t0002g0069 a0001c0016t0009g0072 a0001c0017t0002g0073 a0002c0002t0002g0002 a0002c0002t0002g0006 a0002c0002t0002g0012 a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0002g0032 a0002c0002t0002g0033 a0002c0002t0002g0034 a0002c0002t0002g0067 a0002c0002t0002g0084 a0002c0002t0002g0086 a0002c0002t0002g0088 a0002c0002t0002g0089 a0002c0002t0002g0090 a0002c0002t0002g0091 a0002c0002t0002g0092 a0002c0002t0002g0093 a0002c0002t0002g0094 a0002c0002t0002g0095 a0002c0002t0002g0096 a0002c0002t0002g0097 a0002c0002t0002g0098 a0002c0002t0002g0100 a0002c0002t0002g0101 a0002c0002t0002g0103 a0002c0002t0002g0104 a0002c0002t0002g0105 a0002c0002t0002g0106 a0002c0002t0002g0107 a0002c0002t0002g0108 a0002c0002t0002g0109 a0002c0002t0002g0110 a0002c0002t0002g0111 a0002c0002t0002g0113 a0002c0002t0002g0114 a0002c0002t0002g0115 a0002c0002t0002g0117 a0002c0002t0002g0118 a0002c0002t0002g0125 a0002c0002t0002g0126 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0002g0130 a0002c0002t0002g0131 a0002c0002t0002g0132 a0002c0002t0002g0133 a0002c0002t0002g0135 a0002c0002t0002g0287 a0002c0002t0002g0288 a0002c0002t0006g0099 a0002c0002t0006g0112 a0002c0002t0006g0119 a0002c0002t0006g0139 a0002c0002t0007g0120 a0002c0002t0007g0121 a0002c0002t0010g0002 a0002c0002t0010g0085 a0002c0002t0010g0134 a0002c0002t0022g0006 a0002c0002t0022g0128 a0002c0002t0039g0065 a0002c0002t0040g0140 a0002c0002t0041g0031 a0002c0002t0043g0032 a0002c0002t0044g0083 a0002c0002t0045g0137 a0002c0002t0047g0102 a0002c0006t0002g0066 a0002c0006t0002g0081 a0002c0007t0002g0087 a0002c0007t0002g0136 a0003c0004t0005g0008 a0003c0004t0005g0028 a0003c0004t0005g0078 a0003c0004t0009g0079 a0006c0013t0002g0124 a0007c0011t0002g0002 a0008c0012t0007g0044	161	424	0.3797	0	c.-85 others(3): Show c.-85C>G	CNDP2	ENSG00000133313.15	transcript	ENST00000324262.9	protein_coding	2/12	85		chr18	TogoVar
CNDP2_chr18_74491363_74528454	74499915	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0003 a0001c0001t0036g0003	1	424	0.0024	0	c.-59 others(3): Show c.-59A>T	CNDP2	ENSG00000133313.15	transcript	ENST00000324262.9	protein_coding	2/12	59		chr18	TogoVar
CNDP2_chr18_74491363_74528454	74499917	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0291 a0001c0001t0035g0291	1	424	0.0024	0	c.-57 others(3): Show c.-57C>T	CNDP2	ENSG00000133313.15	transcript	ENST00000324262.9	protein_coding	2/12	57		chr18	TogoVar
CNEP1R1_chr16_50020225_50042081	50025257	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0001 a0001c0001t0013g0001	1	378	0.0027	0	c.-59 others(3): Show c.-59G>C	CNEP1R1	ENSG00000205423.12	transcript	ENST00000427478.7	protein_coding	1/6	59		chr16	TogoVar
CNEP1R1_chr16_50020225_50042081	50025280	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01167.hp1 HG01169.hp2 NA20805.hp2 HG01167.hp1 HG01169.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0026 a0001c0001t0012 a0001c0001t0026	a0001c0001t0012g0005 a0001c0001t0026g0005 a0001c0001t0012g0005 a0001c0001t0026g0005	3	378	0.0079	0	c.-36 others(3): Show c.-36A>G	CNEP1R1	ENSG00000205423.12	transcript	ENST00000427478.7	protein_coding	1/6	36		chr16	TogoVar
CNFN_chr19_42382019_42395297	42390248	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0055 a0001c0001t0003g0055	1	276	0.0036	0	c.-11 others(3): Show c.-11A>G	CNFN	ENSG00000105427.10	transcript	ENST00000222032.10	protein_coding	1/4	1211		chr19	TogoVar
CNGA1_chr4_47930977_48021681	47981419	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0018 a0001c0001t0009g0018	1	366	0.0027	0	c.-41 others(3): Show c.-41A>G	CNGA1	ENSG00000198515.16	transcript	ENST00000514170.7	protein_coding	3/11	28730		chr4	TogoVar
CNGA1_chr4_47930977_48021681	47981469	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp2 HG02895.hp2 HG02922.hp2 others(3): Show HG01884.hp2 HG02895.hp2 HG02922.hp2 HG03098.hp1 HG03453.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0009 a0001c0001t0005g0010 a0001c0001t0005g0203 others(1): Show a0001c0001t0005g0009 a0001c0001t0005g0010 a0001c0001t0005g0203 a0001c0001t0005g0342	6	366	0.0164	0	c.-91 others(3): Show c.-91G>A	CNGA1	ENSG00000198515.16	transcript	ENST00000514170.7	protein_coding	3/11	28780		chr4	TogoVar
CNGA1_chr4_47930977_48021681	48016491	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02602.hp1 HG02735.hp1 HG03654.hp2 HG02602.hp1 HG02735.hp1 HG03654.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0094 a0002c0002t0007g0095 a0002c0002t0007g0096 a0002c0002t0007g0094 a0002c0002t0007g0095 a0002c0002t0007g0096	3	366	0.0082	0	c.-23 others(4): Show c.-231C>A	CNGA1	ENSG00000198515.16	transcript	ENST00000514170.7	protein_coding	1/11	63802		chr4	TogoVar
CNGA1_chr4_47930977_48021681	48016512	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(248): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00423.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp2 HG02148.hp1 HG02257.hp1 HG02273.hp1 HG02280.hp1 HG02300.hp1 HG02300.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18944.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18952.hp1 NA18954.hp2 NA18957.hp2 NA18962.hp1 NA18963.hp2 NA18965.hp1 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18985.hp2 NA18986.hp1 NA18987.hp2 NA18989.hp2 NA18990.hp1 NA18991.hp2 NA18992.hp2 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp2 NA19057.hp1 NA19058.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0003 a0001c0004 others(4): Show a0001c0001 a0001c0003 a0001c0004 a0002c0002 a0003c0006 a0004c0005 a0005c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0003t0001 a0001c0003t0003 a0001c0004t0001 a0002c0002t0001 a0002c0002t0003 a0003c0006t0008 a0004c0005t0003 a0005c0007t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0011 others(232): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0213 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0327 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0335 a0001c0001t0001g0336 a0001c0001t0001g0337 a0001c0001t0001g0339 a0001c0001t0001g0340 a0001c0001t0001g0341 a0001c0001t0001g0343 a0001c0001t0001g0344 a0001c0001t0001g0345 a0001c0001t0001g0346 a0001c0001t0001g0347 a0001c0001t0003g0001 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0019 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0070 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0093 a0001c0001t0004g0031 a0001c0001t0004g0032 a0001c0001t0004g0033 a0001c0001t0004g0034 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0004g0037 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0040 a0001c0001t0004g0041 a0001c0001t0004g0042 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0068 a0001c0001t0004g0069 a0001c0001t0004g0072 a0001c0001t0005g0009 a0001c0001t0005g0010 a0001c0001t0005g0203 a0001c0001t0005g0342 a0001c0001t0006g0209 a0001c0001t0006g0210 a0001c0001t0006g0211 a0001c0001t0006g0212 a0001c0001t0006g0248 a0001c0001t0008g0016 a0001c0001t0009g0018 a0001c0003t0001g0338 a0001c0003t0003g0020 a0001c0003t0003g0075 a0001c0003t0003g0078 a0001c0003t0003g0087 a0001c0003t0003g0088 a0001c0003t0003g0089 a0001c0003t0003g0090 a0001c0003t0003g0091 a0001c0003t0003g0092 a0001c0004t0001g0208 a0001c0004t0001g0214 a0001c0004t0001g0215 a0001c0004t0001g0216 a0001c0004t0001g0220 a0001c0004t0001g0233 a0001c0004t0001g0321 a0002c0002t0001g0249 a0002c0002t0001g0276 a0002c0002t0001g0312 a0002c0002t0003g0073 a0002c0002t0003g0074 a0003c0006t0008g0017 a0004c0005t0003g0071 a0005c0007t0001g0313	251	366	0.6858	0	c.-25 others(4): Show c.-252A>G	CNGA1	ENSG00000198515.16	transcript	ENST00000514170.7	protein_coding	1/11	63823		chr4	TogoVar
CNGA1_chr4_47930977_48021681	48016597	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00423.hp1 HG00609.hp2 others(80): Show HG00099.hp2 HG00423.hp1 HG00609.hp2 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00735.hp2 HG00741.hp2 HG01123.hp2 HG01167.hp1 HG01169.hp2 HG01175.hp1 HG01261.hp2 HG01361.hp1 HG01515.hp2 HG01517.hp1 HG01891.hp2 HG01981.hp1 HG02027.hp1 HG02257.hp1 HG02280.hp1 HG02300.hp2 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp2 HG02622.hp1 HG02698.hp2 HG02723.hp2 HG02886.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03139.hp2 HG03225.hp1 HG03453.hp1 HG03491.hp1 HG03516.hp1 HG03688.hp2 HG03710.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp2 NA18522.hp2 NA18939.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp2 NA18952.hp1 NA18963.hp2 NA18970.hp2 NA18972.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp2 NA18981.hp1 NA18982.hp2 NA18987.hp2 NA18990.hp1 NA18991.hp2 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA19002.hp2 NA19003.hp2 NA19010.hp2 NA19058.hp2 NA19063.hp2 NA19068.hp2 NA19078.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA20300.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0004c0005	a0001c0001t0003 a0001c0001t0004 a0001c0003t0003 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0003t0003 a0002c0002t0003 a0004c0005t0003	a0001c0001t0003g0001 a0001c0001t0003g0002 a0001c0001t0003g0005 others(75): Show a0001c0001t0003g0001 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0019 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0070 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0093 a0001c0001t0004g0031 a0001c0001t0004g0032 a0001c0001t0004g0033 a0001c0001t0004g0034 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0004g0037 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0040 a0001c0001t0004g0041 a0001c0001t0004g0042 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0068 a0001c0001t0004g0069 a0001c0001t0004g0072 a0001c0003t0003g0020 a0001c0003t0003g0075 a0001c0003t0003g0078 a0001c0003t0003g0087 a0001c0003t0003g0088 a0001c0003t0003g0089 a0001c0003t0003g0090 a0001c0003t0003g0091 a0001c0003t0003g0092 a0002c0002t0003g0073 a0002c0002t0003g0074 a0004c0005t0003g0071	83	366	0.2268	0	c.-33 others(4): Show c.-337G>C	CNGA1	ENSG00000198515.16	transcript	ENST00000514170.7	protein_coding	1/11	63908		chr4	TogoVar
CNGA1_chr4_47930977_48021681	48016655	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02615.hp2 HG02717.hp2 HG02809.hp1 HG02615.hp2 HG02717.hp2 HG02809.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0008 a0001c0001t0009 a0003c0006t0008 a0001c0001t0008 a0001c0001t0009 a0003c0006t0008	a0001c0001t0008g0016 a0001c0001t0009g0018 a0003c0006t0008g0017 a0001c0001t0008g0016 a0001c0001t0009g0018 a0003c0006t0008g0017	3	366	0.0082	0	c.-39 others(4): Show c.-395G>A	CNGA1	ENSG00000198515.16	transcript	ENST00000514170.7	protein_coding	1/11	63966		chr4	TogoVar
CNGA3_chr2_98341456_98403601	98346499	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0068 a0001c0002t0005g0068	1	338	0.0030	0	c.-73 others(3): Show c.-73C>A	CNGA3	ENSG00000144191.12	transcript	ENST00000272602.7	protein_coding	1/8	23477		chr2	TogoVar
CNIH1_chr14_54418561_54446374	54441355	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18969.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0103 a0001c0001t0025g0103	1	382	0.0026	0	c.-28 others(3): Show c.-28C>T	CNIH1	ENSG00000100528.12	transcript	ENST00000216416.9	protein_coding	1/5	28		chr14	TogoVar
CNIH2_chr11_66273175_66289206	66278188	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0007 a0001c0001t0003g0007	1	420	0.0024	0	c.-26 others(4): Show c.-269C>A	CNIH2	ENSG00000174871.11	transcript	ENST00000311445.7	protein_coding	1/6	269		chr11	TogoVar
CNIH2_chr11_66273175_66289206	66278314	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp1 HG02630.hp2 HG02976.hp1 others(6): Show HG01884.hp1 HG02630.hp2 HG02976.hp1 HG02976.hp2 HG03209.hp1 HG03471.hp1 HG03516.hp2 NA18522.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0004 others(2): Show a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0007 a0001c0001t0002g0064	9	420	0.0214	0	c.-14 others(4): Show c.-143C>T	CNIH2	ENSG00000174871.11	transcript	ENST00000311445.7	protein_coding	1/6	143		chr11	TogoVar
CNIH3_chr1_224611317_224745554	224616343	G G	GGCGGCA GGCGGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02280.hp1 HG02572.hp1 HG02630.hp1 others(5): Show HG02280.hp1 HG02572.hp1 HG02630.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03209.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0012 a0001c0001t0008 a0001c0001t0012	a0001c0001t0008g0018 a0001c0001t0008g0019 a0001c0001t0008g0020 others(5): Show a0001c0001t0008g0018 a0001c0001t0008g0019 a0001c0001t0008g0020 a0001c0001t0008g0021 a0001c0001t0008g0022 a0001c0001t0012g0012 a0001c0001t0012g0013 a0001c0001t0012g0014	8	358	0.0224	6	c.-82 others(15): Show c.-823_-818dupGGCAGC	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	817	INFO_REALIGN_3_PRIME	chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616343	G G	GGCGGCAG others(5): Show GGCGGCAGCGGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0015 a0001c0001t0029g0015	1	358	0.0028	12	c.-82 others(21): Show c.-829_-818dupGGCAGCGGCAGC	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	817	INFO_REALIGN_3_PRIME	chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616343	G G	GGCGGCAG others(11): Show GGCGGCAGCGGCAGCGGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03130.hp1 HG03453.hp2 HG03130.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0010 a0001c0001t0015g0011 a0001c0001t0015g0010 a0001c0001t0015g0011	2	358	0.0056	18	c.-81 others(27): Show c.-818_-817insGGCAGCGGCAGCGGCAGC	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	817	INFO_REALIGN_3_PRIME	chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616349	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0144 a0001c0001t0031g0144	1	358	0.0028	0	c.-82 others(4): Show c.-826A>G	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	826		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616352	G G	GGCAGCGG others(17): Show GGCAGCGGCAGCGGCAGCGGCAGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00609.hp1 HG02523.hp2 HG04184.hp2 others(10): Show HG00609.hp1 HG02523.hp2 HG04184.hp2 NA18960.hp1 NA18966.hp2 NA18969.hp2 NA18975.hp2 NA18984.hp1 NA18992.hp2 NA19012.hp1 NA19065.hp2 NA19068.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0007 a0001c0001t0030 a0001c0001t0006 a0001c0001t0007 a0001c0001t0030	a0001c0001t0006g0027 a0001c0001t0006g0028 a0001c0001t0006g0032 others(10): Show a0001c0001t0006g0027 a0001c0001t0006g0028 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0034 a0001c0001t0006g0035 a0001c0001t0007g0023 a0001c0001t0007g0024 a0001c0001t0007g0025 a0001c0001t0007g0029 a0001c0001t0007g0030 a0001c0001t0007g0031 a0001c0001t0030g0026	13	358	0.0363	24	c.-81 others(33): Show c.-818_-817insGGCAGCGGCAGCGGCAGCAGCAGC	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	817	INFO_REALIGN_3_PRIME	chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616452	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0173 a0001c0001t0027g0173	1	358	0.0028	0	c.-72 others(4): Show c.-723C>G	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	723		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616570	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0164 a0001c0001t0026g0164	1	358	0.0028	0	c.-60 others(4): Show c.-605A>G	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	605		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616811	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0132 a0001c0001t0025g0132	1	358	0.0028	0	c.-36 others(4): Show c.-364C>T	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	364		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616945	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0262 a0001c0001t0028g0262	1	358	0.0028	0	c.-23 others(4): Show c.-230A>G	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	230		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616947	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00544.hp1 HG01069.hp2 others(35): Show HG00280.hp1 HG00544.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01099.hp1 HG01175.hp1 HG01257.hp2 HG01258.hp1 HG01433.hp2 HG01928.hp2 HG01952.hp2 HG01993.hp2 HG02004.hp2 HG02040.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02602.hp2 HG03239.hp1 HG03831.hp1 HG03834.hp2 HG04228.hp1 NA18942.hp1 NA18949.hp2 NA18951.hp2 NA18959.hp1 NA18962.hp2 NA18964.hp1 NA18972.hp1 NA18978.hp2 NA18982.hp2 NA18993.hp1 NA19002.hp1 NA19004.hp2 NA19070.hp1 NA19085.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0016 a0001c0001t0017 others(1): Show a0001c0001t0002 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018	a0001c0001t0002g0001 a0001c0001t0002g0169 a0001c0001t0002g0176 others(32): Show a0001c0001t0002g0001 a0001c0001t0002g0169 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0236 a0001c0001t0016g0199 a0001c0001t0017g0201 a0001c0001t0018g0204	38	358	0.1062	0	c.-22 others(4): Show c.-228G>A	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	228		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224616972	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18980.hp2 NA19002.hp2 NA19066.hp2 others(1): Show NA18980.hp2 NA19002.hp2 NA19066.hp2 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0019 a0001c0001t0009 a0001c0001t0019	a0001c0001t0009g0085 a0001c0001t0009g0086 a0001c0001t0009g0093 others(1): Show a0001c0001t0009g0085 a0001c0001t0009g0086 a0001c0001t0009g0093 a0001c0001t0019g0082	4	358	0.0112	0	c.-20 others(4): Show c.-203G>A	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	203		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224617033	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00609.hp1 HG02257.hp1 HG02280.hp1 others(23): Show HG00609.hp1 HG02257.hp1 HG02280.hp1 HG02523.hp2 HG02572.hp1 HG02630.hp1 HG02809.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03130.hp1 HG03209.hp1 HG03453.hp2 HG03486.hp1 HG04184.hp2 NA18522.hp1 NA18960.hp1 NA18966.hp2 NA18969.hp2 NA18975.hp2 NA18984.hp1 NA18992.hp2 NA19012.hp1 NA19065.hp2 NA19068.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 others(5): Show a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0029 a0001c0001t0030	a0001c0001t0006g0027 a0001c0001t0006g0028 a0001c0001t0006g0032 others(23): Show a0001c0001t0006g0027 a0001c0001t0006g0028 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0034 a0001c0001t0006g0035 a0001c0001t0007g0023 a0001c0001t0007g0024 a0001c0001t0007g0025 a0001c0001t0007g0029 a0001c0001t0007g0030 a0001c0001t0007g0031 a0001c0001t0008g0018 a0001c0001t0008g0019 a0001c0001t0008g0020 a0001c0001t0008g0021 a0001c0001t0008g0022 a0001c0001t0012g0012 a0001c0001t0012g0013 a0001c0001t0012g0014 a0001c0001t0013g0016 a0001c0001t0013g0017 a0001c0001t0015g0010 a0001c0001t0015g0011 a0001c0001t0029g0015 a0001c0001t0030g0026	26	358	0.0726	0	c.-14 others(4): Show c.-142T>C	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	142		chr1	TogoVar
CNIH3_chr1_224611317_224745554	224617095	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19080.hp1 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0109 a0001c0001t0020g0109	1	358	0.0028	0	c.-80 others(3): Show c.-80G>C	CNIH3	ENSG00000143786.8	transcript	ENST00000272133.4	protein_coding	1/6	80		chr1	TogoVar
CNKSR1_chr1_26172491_26194884	26177498	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0003 a0001c0001t0005g0003	1	372	0.0027	0	c.-50 others(3): Show c.-50G>A	CNKSR1	ENSG00000142675.18	transcript	ENST00000361530.11	protein_coding	1/21	50		chr1	TogoVar
CNKSR1_chr1_26172491_26194884	26177545	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG00738.hp2 others(18): Show HG00639.hp1 HG00642.hp1 HG00738.hp2 HG01070.hp2 HG01123.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG02015.hp2 HG02451.hp2 HG02572.hp2 HG02630.hp1 HG02738.hp1 HG02965.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03704.hp2 NA18522.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0002 a0001c0001t0006 a0004c0005t0002 a0001c0001t0002 a0001c0001t0006 a0004c0005t0002	a0001c0001t0002g0009 a0001c0001t0002g0011 a0001c0001t0002g0037 others(9): Show a0001c0001t0002g0009 a0001c0001t0002g0011 a0001c0001t0002g0037 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0006g0105 a0004c0005t0002g0011 a0004c0005t0002g0102	21	372	0.0565	0	c.-3G others(2): Show c.-3G>A	CNKSR1	ENSG00000142675.18	transcript	ENST00000361530.11	protein_coding	1/21	3		chr1	TogoVar
CNKSR2_chrX_21369418_21659689	21374594	G G	GGCA GGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01167.hp1 NA18955.hp1 NA19062.hp1 others(1): Show HG01167.hp1 NA18955.hp1 NA19062.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0024 a0001c0001t0025 a0001c0001t0013 a0001c0001t0024 a0001c0001t0025	a0001c0001t0013g0066 a0001c0001t0013g0100 a0001c0001t0024g0156 others(1): Show a0001c0001t0013g0066 a0001c0001t0013g0100 a0001c0001t0024g0156 a0001c0001t0025g0130	4	163	0.0245	3	c.-26 others(12): Show c.-268_-266dupAGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	265	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374594	G G	GGCAGCA GGCAGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01243.hp1 HG02055.hp1 NA19060.hp1 HG01243.hp1 HG02055.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022	a0001c0001t0020g0141 a0001c0001t0021g0088 a0001c0001t0022g0033 a0001c0001t0020g0141 a0001c0001t0021g0088 a0001c0001t0022g0033	3	163	0.0184	6	c.-27 others(15): Show c.-271_-266dupAGCAGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	265	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374594	G G	GGCAGCAG others(5): Show GGCAGCAGCAGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0123 a0001c0001t0018g0123	1	163	0.0061	12	c.-27 others(21): Show c.-277_-266dupAGCAGCAGCAGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	265	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374594	GGCA GGCA	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00621.hp1 HG00735.hp1 others(36): Show HG00140.hp1 HG00621.hp1 HG00735.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01106.hp1 HG01109.hp1 HG01433.hp1 HG02074.hp1 HG02083.hp1 HG02145.hp1 HG02258.hp1 HG02280.hp2 HG02572.hp1 HG02809.hp1 HG02809.hp2 HG03098.hp1 HG03139.hp1 HG03486.hp1 HG03486.hp2 NA18612.hp1 NA18943.hp1 NA18944.hp1 NA18966.hp1 NA18974.hp1 NA18986.hp1 NA18990.hp1 NA19000.hp1 NA19004.hp1 NA19012.hp1 NA19043.hp1 NA19055.hp1 NA19070.hp1 NA19076.hp1 NA19086.hp1 NA19091.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 others(6): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0017 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041	a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0019 others(36): Show a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0019 a0001c0001t0002g0028 a0001c0001t0002g0043 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0115 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0008g0005 a0001c0001t0008g0124 a0001c0001t0008g0135 a0001c0001t0008g0143 a0001c0001t0009g0010 a0001c0001t0009g0011 a0001c0001t0009g0012 a0001c0001t0009g0013 a0001c0001t0012g0025 a0001c0001t0012g0045 a0001c0001t0012g0142 a0001c0001t0017g0018 a0001c0001t0017g0146 a0001c0001t0038g0150 a0001c0001t0039g0144 a0001c0001t0040g0027 a0001c0001t0041g0009	39	163	0.2393	-3	c.-26 others(12): Show c.-268_-266delAGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	266	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374594	GGCAGCAG others(8): Show GGCAGCAGCAGCAGCA	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0042	a0001c0001t0042g0008 a0001c0001t0042g0008	1	163	0.0061	-15	c.-28 others(24): Show c.-280_-266delAGCAGCAGCAGCAGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	266	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374594	GGCAGCAG others(14): Show GGCAGCAGCAGCAGCAGCAGCA	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0043 a0001c0001t0043	a0001c0001t0043g0007 a0001c0001t0043g0007	1	163	0.0061	-21	c.-28 others(30): Show c.-286_-266delAGCAGCAGCAGCAGCAGCAGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	266	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374630	A A	AGCAGCAG others(5): Show AGCAGCAGCAGCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0014 a0001c0001t0019g0014	1	163	0.0061	12	c.-26 others(21): Show c.-266_-265insAGCAGCAGCCGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	265	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374630	A A	AGCAGCCG others(5): Show AGCAGCCGCCGCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0006 a0001c0001t0023g0006	1	163	0.0061	12	c.-26 others(21): Show c.-266_-265insAGCCGCCGCCGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	265	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374630	A A	AGCC AGCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00609.hp1 HG00738.hp1 HG00741.hp1 others(10): Show HG00609.hp1 HG00738.hp1 HG00741.hp1 HG01192.hp1 HG01256.hp1 HG01258.hp1 HG01952.hp1 HG02015.hp1 HG02300.hp1 HG02602.hp1 HG03688.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0015 a0001c0001t0016 a0001c0001t0004 a0001c0001t0015 a0001c0001t0016	a0001c0001t0004g0020 a0001c0001t0004g0021 a0001c0001t0004g0055 others(10): Show a0001c0001t0004g0020 a0001c0001t0004g0021 a0001c0001t0004g0055 a0001c0001t0004g0056 a0001c0001t0004g0057 a0001c0001t0004g0064 a0001c0001t0004g0117 a0001c0001t0004g0129 a0001c0001t0004g0132 a0001c0001t0015g0038 a0001c0001t0015g0098 a0001c0001t0016g0032 a0001c0001t0016g0085	13	163	0.0798	3	c.-25 others(12): Show c.-252_-250dupGCC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	249	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374630	A A	AGCCGCAG others(14): Show AGCCGCAGCAGCCGCAGCAGCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02615.hp1 HG02965.hp1 HG03471.hp1 HG02615.hp1 HG02965.hp1 HG03471.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0026 a0001c0003t0014 a0001c0003t0026	a0001c0003t0014g0147 a0001c0003t0014g0149 a0001c0003t0026g0148 a0001c0003t0014g0147 a0001c0003t0014g0149 a0001c0003t0026g0148	3	163	0.0184	21	c.-26 others(30): Show c.-263_-262insAGCAGCCGCAGCAGCCGCCGC	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	262	INFO_REALIGN_3_PRIME	chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374630	A A	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01081.hp1 HG01081.hp2 HG02280.hp1 others(22): Show HG01081.hp1 HG01081.hp2 HG02280.hp1 HG02717.hp1 HG02735.hp1 HG02886.hp2 HG02895.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03209.hp1 HG03225.hp1 HG03579.hp1 HG03942.hp1 HG04204.hp1 NA18522.hp1 NA18953.hp1 NA18965.hp1 NA18967.hp1 NA18970.hp1 NA18994.hp1 NA18995.hp1 NA19043.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0002c0005 a0001c0001 a0001c0007 a0002c0005	a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 others(7): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0034 a0001c0001t0035 a0001c0001t0037 a0001c0001t0040 a0001c0001t0041 a0001c0007t0036 a0002c0005t0003	a0001c0001t0003g0015 a0001c0001t0003g0024 a0001c0001t0003g0029 others(22): Show a0001c0001t0003g0015 a0001c0001t0003g0024 a0001c0001t0003g0029 a0001c0001t0003g0031 a0001c0001t0003g0044 a0001c0001t0003g0061 a0001c0001t0003g0070 a0001c0001t0003g0101 a0001c0001t0003g0116 a0001c0001t0003g0133 a0001c0001t0003g0136 a0001c0001t0003g0151 a0001c0001t0010g0152 a0001c0001t0010g0153 a0001c0001t0010g0162 a0001c0001t0011g0016 a0001c0001t0011g0017 a0001c0001t0011g0138 a0001c0001t0034g0091 a0001c0001t0035g0054 a0001c0001t0037g0092 a0001c0001t0040g0027 a0001c0001t0041g0009 a0001c0007t0036g0026 a0002c0005t0003g0030	25	163	0.1534	0	c.-26 others(4): Show c.-268A>C	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	268		chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374633	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0141 a0001c0001t0020g0141	1	163	0.0061	0	c.-26 others(4): Show c.-265C>A	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	265		chrX	TogoVar
CNKSR2_chrX_21369418_21659689	21374772	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02615.hp1 HG02965.hp1 HG03471.hp1 HG02615.hp1 HG02965.hp1 HG03471.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0026 a0001c0003t0014 a0001c0003t0026	a0001c0003t0014g0147 a0001c0003t0014g0149 a0001c0003t0026g0148 a0001c0003t0014g0147 a0001c0003t0014g0149 a0001c0003t0026g0148	3	163	0.0184	0	c.-12 others(4): Show c.-126G>A	CNKSR2	ENSG00000149970.16	transcript	ENST00000379510.5	protein_coding	1/22	126		chrX	TogoVar

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