Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA18972	hp1	a0007	a0007c0034	a0007c0034t0001	a0007c0034t0001g0316	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18972	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0209	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0191	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0273	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18972	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0220	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18972	hp2	a0009	a0009c0013	a0009c0013t0000	a0009c0013t0000g0166	JPT	EAS	A3GALT2	chr1	33301766	33326098
AADACL2_chr3_151728927_151766339	NA18972	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0026	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18972	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0022	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18972	hp2	a0001	a0001c0002	a0001c0002t0009	a0001c0002t0009g0017	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18972	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18972	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0041	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18972	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0086	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18972	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0332	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18972	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0033	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0285	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18972	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0017	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18972	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18972	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0144	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18972	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA5_chr17_69239311_69332133	NA18972	hp1	a0001	a0001c0017	a0001c0017t0001	a0001c0017t0001g0159	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18972	hp2	a0007	a0007c0011	a0007c0011t0002	a0007c0011t0002g0286	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCB9_chr12_122923992_122971463	NA18972	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0104	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA18972	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0198	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCC5_chr3_183914934_184022884	NA18972	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0225	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18972	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0038	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCD4_chr14_74280269_74307934	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0195	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCF2_chr7_151206484_151232205	NA18972	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0014	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA18972	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0002	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCG2_chr4_88085269_88163639	NA18972	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0327	JPT	EAS	ABCG2	chr4	88085269	88163639
ABCG2_chr4_88085269_88163639	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0231	JPT	EAS	ABCG2	chr4	88085269	88163639
ABCG4_chr11_119144052_119167653	NA18972	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	ABCG4	chr11	119144052	119167653
ABCG4_chr11_119144052_119167653	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCG4	chr11	119144052	119167653
ABCG5_chr2_43807472_43843839	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0111	JPT	EAS	ABCG5	chr2	43807472	43843839
ABCG5_chr2_43807472_43843839	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0212	JPT	EAS	ABCG5	chr2	43807472	43843839
ABCG8_chr2_43833971_43887988	NA18972	hp1	a0001	a0001c0001	a0001c0001t0067	a0001c0001t0067g0120	JPT	EAS	ABCG8	chr2	43833971	43887988
ABCG8_chr2_43833971_43887988	NA18972	hp2	a0002	a0002c0004	a0002c0004t0042	a0002c0004t0042g0228	JPT	EAS	ABCG8	chr2	43833971	43887988
ABHD10_chr3_111974026_111998368	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD10_chr3_111974026_111998368	NA18972	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD11_chr7_73731094_73743802	NA18972	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD11_chr7_73731094_73743802	NA18972	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	ABHD11	chr7	73731094	73743802