Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA18999	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0163	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18999	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0156	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18999	hp2	a0012	a0012c0014	a0012c0014t0002	a0012c0014t0002g0079	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA18999	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0177	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18999	hp2	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0221	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18999	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18999	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0005	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18999	hp1	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0017	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18999	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0101	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0319	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA18999	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18999	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0142	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0085	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AADACL4	chr1	12639085	12672076
AAMDC_chr11_77816144_77877352	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0328	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18999	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18999	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0045	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA18999	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18999	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18999	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0119	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18999	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0229	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA18999	hp1	a0003	a0003c0009	a0003c0009t0001	a0003c0009t0001g0247	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18999	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0270	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18999	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0195	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18999	hp2	a0002	a0002c0005	a0002c0005t0004	a0002c0005t0004g0186	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	NA18999	hp1	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0045	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18999	hp2	a0009	a0009c0018	a0009c0018t0003	a0009c0018t0003g0253	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0085	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18999	hp2	a0001	a0001c0027	a0001c0027t0001	a0001c0027t0001g0083	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA18999	hp1	a0015	a0015c0023	a0015c0023t0002	a0015c0023t0002g0279	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18999	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0126	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA8_chr17_68862289_68960392	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0238	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18999	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0066	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB4_chr7_87396696_87480680	NA18999	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0141	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18999	hp2	a0011	a0011c0020	a0011c0020t0001	a0011c0020t0001g0189	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB6_chr2_219204772_219223958	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18999	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCC5_chr3_183914934_184022884	NA18999	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18999	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0284	JPT	EAS	ABCC5	chr3	183914934	184022884