Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view YARS1 165 46 77 48 0 0 0.640 0.178 0.298 0.186 0.000 0.000 chr1 32770239 32822358
view YARS2 196 60 59 43 0 0 0.760 0.233 0.229 0.167 0.000 0.000 chr12 32741544 32760897
view YBEY 201 61 53 42 1 0 0.779 0.236 0.205 0.163 0.004 0.000 chr21 46281342 46302751
view YBX1 200 72 52 29 0 0 0.775 0.279 0.202 0.112 0.000 0.000 chr1 42677418 42708805
view YBX2 219 76 36 26 0 0 0.849 0.295 0.140 0.101 0.000 0.000 chr17 7283263 7299639
view YBX3 218 83 36 19 0 0 0.845 0.322 0.140 0.074 0.000 0.000 chr12 10694089 10728323
view YDJC 209 70 46 32 0 0 0.810 0.271 0.178 0.124 0.000 0.000 chr22 21623089 21635022
view YEATS2 154 38 67 42 0 0 0.597 0.147 0.260 0.163 0.000 0.000 chr3 183692797 183817624
view YEATS4 201 70 54 32 0 0 0.779 0.271 0.209 0.124 0.000 0.000 chr12 69354743 69395870
view YES1 187 63 58 35 0 0 0.725 0.244 0.225 0.136 0.000 0.000 chr18 716588 817242
view YIF1A 218 79 36 22 0 0 0.845 0.306 0.140 0.085 0.000 0.000 chr11 66279580 66294143
view YIF1B 200 68 53 33 0 0 0.775 0.264 0.205 0.128 0.000 0.000 chr19 38298558 38320947
view YIPF1 179 52 67 47 0 0 0.694 0.202 0.260 0.182 0.000 0.000 chr1 53846733 53894797
view YIPF2 208 75 46 26 1 1 0.806 0.291 0.178 0.101 0.004 0.004 chr19 10917193 10933639
view YIPF3 192 63 64 40 0 0 0.744 0.244 0.248 0.155 0.000 0.000 chr6 43506832 43521926
view YIPF4 198 70 46 27 0 0 0.767 0.271 0.178 0.105 0.000 0.000 chr2 32272904 32321594
view YIPF5 219 83 37 20 1 1 0.849 0.322 0.143 0.078 0.004 0.004 chr5 144153162 144175659
view YIPF6 47 12 201 87 0 0 0.182 0.047 0.779 0.337 0.000 0.000 chrX 68494051 68542282
view YIPF7 204 70 49 31 0 0 0.791 0.271 0.190 0.120 0.000 0.000 chr4 44617088 44656625
view YJEFN3 169 41 83 59 1 0 0.655 0.159 0.322 0.229 0.004 0.000 chr19 19523911 19542581
view YJU2B 215 74 39 29 0 0 0.833 0.287 0.151 0.112 0.000 0.000 chr19 13742895 13768289
view YJU2 191 64 57 36 0 0 0.740 0.248 0.221 0.140 0.000 0.000 chr19 4242080 4274088
view YKT6 208 77 43 22 0 0 0.806 0.298 0.167 0.085 0.000 0.000 chr7 44195978 44219294
view YLPM1 167 60 83 39 0 0 0.647 0.233 0.322 0.151 0.000 0.000 chr14 74758316 74842318
view YME1L1 193 73 55 28 0 0 0.748 0.283 0.213 0.109 0.000 0.000 chr10 27105111 27159384
view YOD1 200 65 56 38 0 0 0.775 0.252 0.217 0.147 0.000 0.000 chr1 207038849 207056208
view YPEL1 185 59 56 33 0 0 0.717 0.229 0.217 0.128 0.000 0.000 chr22 21692536 21740794
view YPEL2 174 55 63 38 0 0 0.674 0.213 0.244 0.147 0.000 0.000 chr17 59326655 59406729
view YPEL3 188 63 67 40 0 0 0.729 0.244 0.260 0.155 0.000 0.000 chr16 30087314 30101213
view YPEL4 163 33 94 71 0 0 0.632 0.128 0.364 0.275 0.000 0.000 chr11 57640087 57654912
view YPEL5 201 75 56 30 1 0 0.779 0.291 0.217 0.116 0.004 0.000 chr2 30142007 30165533
view YRDC 207 77 49 28 0 0 0.802 0.298 0.190 0.109 0.000 0.000 chr1 37797945 37813208
view YTHDC1 193 68 54 33 0 0 0.748 0.264 0.209 0.128 0.000 0.000 chr4 68305387 68355090
view YTHDC2 157 47 85 50 0 0 0.609 0.182 0.329 0.194 0.000 0.000 chr5 113508694 113600284
view YTHDF1 188 59 57 37 0 0 0.729 0.229 0.221 0.143 0.000 0.000 chr20 63190429 63221131
view YTHDF2 145 33 97 61 0 0 0.562 0.128 0.376 0.236 0.000 0.000 chr1 28731940 28774775
view YTHDF3 186 68 58 30 0 0 0.721 0.264 0.225 0.116 0.000 0.000 chr8 63163621 63217786
view YWHAB 181 56 64 39 0 0 0.702 0.217 0.248 0.151 0.000 0.000 chr20 44880705 44913532
view YWHAE 186 51 59 44 0 0 0.721 0.198 0.229 0.171 0.000 0.000 chr17 1339275 1405222
view YWHAG 191 65 57 36 0 0 0.740 0.252 0.221 0.140 0.000 0.000 chr7 76321799 76363991
view YWHAH 203 69 52 33 0 0 0.787 0.267 0.202 0.128 0.000 0.000 chr22 31939535 31962603
view YWHAQ 135 23 97 61 0 0 0.523 0.089 0.376 0.236 0.000 0.000 chr2 9578967 9635997
view YWHAZ 195 62 52 36 0 0 0.756 0.240 0.202 0.140 0.000 0.000 chr8 100911523 100957020
view YY1AP1 138 37 110 60 0 0 0.535 0.143 0.426 0.233 0.000 0.000 chr1 155654454 155693774
view YY1 173 49 71 47 0 0 0.671 0.190 0.275 0.182 0.000 0.000 chr14 100234144 100287788
view YY2 99 34 153 68 2 0 0.384 0.132 0.593 0.264 0.008 0.000 chrX 21850987 21863740
view ZACN 195 70 60 33 0 0 0.756 0.271 0.233 0.128 0.000 0.000 chr17 76074182 76087806
view ZAN 153 38 85 53 0 0 0.593 0.147 0.329 0.205 0.000 0.000 chr7 100728595 100802797
view ZAP70 183 56 65 41 0 0 0.709 0.217 0.252 0.159 0.000 0.000 chr2 97708576 97744860
view ZAR1L 236 88 19 15 1 0 0.915 0.341 0.074 0.058 0.004 0.000 chr13 32298699 32320363