Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view WDR55 190 64 66 40 0 0 0.736 0.248 0.256 0.155 0.000 0.000 chr5 140659904 140677345
view WDR59 146 33 68 44 0 0 0.566 0.128 0.264 0.171 0.000 0.000 chr16 74866362 74990123
view WDR5B 232 88 25 16 0 0 0.899 0.341 0.097 0.062 0.000 0.000 chr3 122406846 122421062
view WDR5 202 71 49 30 0 0 0.783 0.275 0.190 0.116 0.000 0.000 chr9 134131082 134164968
view WDR62 209 74 45 27 0 0 0.810 0.287 0.174 0.105 0.000 0.000 chr19 36049897 36110108
view WDR64 162 51 54 31 0 0 0.628 0.198 0.209 0.120 0.000 0.000 chr1 241647281 241807777
view WDR6 123 22 133 82 0 0 0.477 0.085 0.516 0.318 0.000 0.000 chr3 49002391 49020951
view WDR70 120 27 90 50 0 0 0.465 0.105 0.349 0.194 0.000 0.000 chr5 37374318 37758435
view WDR72 157 47 60 36 0 0 0.609 0.182 0.233 0.140 0.000 0.000 chr15 53508741 53764663
view WDR73 196 60 54 38 0 0 0.760 0.233 0.209 0.147 0.000 0.000 chr15 84634285 84659283
view WDR74 205 73 50 31 2 0 0.795 0.283 0.194 0.120 0.008 0.000 chr11 62827911 62844590
view WDR75 181 57 60 36 0 0 0.702 0.221 0.233 0.140 0.000 0.000 chr2 189436474 189480552
view WDR76 152 53 91 43 0 0 0.589 0.205 0.353 0.167 0.000 0.000 chr15 43822002 43873412
view WDR77 209 80 45 22 1 1 0.810 0.310 0.174 0.085 0.004 0.004 chr1 111434890 111454256
view WDR7 71 10 102 56 0 0 0.275 0.039 0.395 0.217 0.000 0.000 chr18 56646359 57034792
view WDR81 215 72 39 29 0 0 0.833 0.279 0.151 0.112 0.000 0.000 chr17 1719704 1743585
view WDR82 182 58 67 42 0 0 0.705 0.225 0.260 0.163 0.000 0.000 chr3 52249434 52283649
view WDR83OS 201 64 52 37 1 0 0.779 0.248 0.202 0.143 0.004 0.000 chr19 12663073 12674415
view WDR83 207 70 45 30 0 0 0.802 0.271 0.174 0.116 0.000 0.000 chr19 12661807 12680832
view WDR86 228 80 23 19 0 0 0.884 0.310 0.089 0.074 0.000 0.000 chr7 151376124 151415038
view WDR87 164 54 85 43 1 1 0.636 0.209 0.329 0.167 0.004 0.004 chr19 37879823 37911594
view WDR88 178 54 63 41 0 0 0.690 0.209 0.244 0.159 0.000 0.000 chr19 33127114 33180799
view WDR89 141 34 85 56 0 0 0.547 0.132 0.329 0.217 0.000 0.000 chr14 63592039 63646871
view WDR90 187 60 60 35 0 0 0.725 0.233 0.233 0.136 0.000 0.000 chr16 644365 672830
view WDR91 197 72 52 28 0 0 0.764 0.279 0.202 0.109 0.000 0.000 chr7 135178839 135216526
view WDR93 175 50 64 45 0 0 0.678 0.194 0.248 0.174 0.000 0.000 chr15 89685811 89748638
view WDR97 173 41 75 56 0 0 0.671 0.159 0.291 0.217 0.000 0.000 chr8 144102739 144123328
view WDSUB1 125 41 113 53 0 0 0.484 0.159 0.438 0.205 0.000 0.000 chr2 159230798 159291703
view WDTC1 106 20 125 72 0 0 0.411 0.078 0.484 0.279 0.000 0.000 chr1 27229632 27313636
view WEE1 220 85 36 18 0 0 0.853 0.329 0.140 0.070 0.000 0.000 chr11 9568670 9594985
view WEE2 196 68 53 34 0 0 0.760 0.264 0.205 0.132 0.000 0.000 chr7 141703353 141736271
view WFDC10A 204 78 50 27 1 0 0.791 0.302 0.194 0.105 0.004 0.000 chr20 45624739 45636196
view WFDC10B 219 85 34 15 0 0 0.849 0.329 0.132 0.058 0.000 0.000 chr20 45679651 45710019
view WFDC11 209 77 44 24 0 0 0.810 0.298 0.171 0.093 0.000 0.000 chr20 45643563 45675239
view WFDC12 209 78 49 27 0 0 0.810 0.302 0.190 0.105 0.000 0.000 chr20 45118425 45129465
view WFDC13 225 90 32 14 0 0 0.872 0.349 0.124 0.054 0.000 0.000 chr20 45697038 45713817
view WFDC1 235 88 11 8 0 0 0.911 0.341 0.043 0.031 0.000 0.000 chr16 84289878 84334844
view WFDC2 207 80 47 24 0 0 0.802 0.310 0.182 0.093 0.000 0.000 chr20 45464753 45486532
view WFDC3 204 71 51 33 0 0 0.791 0.275 0.198 0.128 0.000 0.000 chr20 45769213 45796883
view WFDC5 213 78 42 25 0 0 0.826 0.302 0.163 0.097 0.000 0.000 chr20 45104463 45120174
view WFDC6 221 81 36 23 0 0 0.857 0.314 0.140 0.089 0.000 0.000 chr20 45529196 45544482
view WFDC8 203 78 50 25 0 0 0.787 0.302 0.194 0.097 0.000 0.000 chr20 45546762 45584284
view WFDC9 198 78 50 24 0 0 0.767 0.302 0.194 0.093 0.000 0.000 chr20 45602939 45636284
view WFIKKN1 201 58 46 37 1 0 0.779 0.225 0.178 0.143 0.004 0.000 chr16 625985 639117
view WFIKKN2 208 70 44 30 0 0 0.806 0.271 0.171 0.116 0.000 0.000 chr17 50830586 50847353
view WFS1 194 55 50 39 0 0 0.752 0.213 0.194 0.151 0.000 0.000 chr4 6264850 6308265
view WHAMM 215 76 39 25 0 0 0.833 0.295 0.151 0.097 0.000 0.000 chr15 82804628 82841108
view WHRN 164 47 65 42 0 0 0.636 0.182 0.252 0.163 0.000 0.000 chr9 114397080 114510473
view WIF1 188 62 48 30 0 0 0.729 0.240 0.186 0.116 0.000 0.000 chr12 65045626 65126305
view WIPF1 149 37 94 59 0 0 0.578 0.143 0.364 0.229 0.000 0.000 chr2 174554574 174602804