Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view WASHC2C 189 67 57 29 0 0 0.733 0.260 0.221 0.112 0.000 0.000 chr10 45722266 45797964
view WASHC3 177 63 73 39 0 0 0.686 0.244 0.283 0.151 0.000 0.000 chr12 102007840 102066991
view WASHC4 197 69 55 35 0 0 0.764 0.267 0.213 0.136 0.000 0.000 chr12 105102731 105174130
view WASHC5 175 61 68 34 0 0 0.678 0.236 0.264 0.132 0.000 0.000 chr8 125019260 125096792
view WASL 177 59 65 36 0 0 0.686 0.229 0.252 0.140 0.000 0.000 chr7 123676943 123754003
view WAS 73 13 180 87 0 0 0.283 0.050 0.698 0.337 0.000 0.000 chrX 48678799 48696427
view WBP11 192 63 60 38 0 0 0.744 0.244 0.233 0.147 0.000 0.000 chr12 14779582 14808478
view WBP1L 179 56 59 37 0 0 0.694 0.217 0.229 0.143 0.000 0.000 chr10 102738948 102821262
view WBP1 172 48 83 54 1 1 0.667 0.186 0.322 0.209 0.004 0.004 chr2 74453438 74465881
view WBP2NL 193 64 55 34 0 0 0.748 0.248 0.213 0.132 0.000 0.000 chr22 41993788 42033475
view WBP2 191 58 60 40 0 0 0.740 0.225 0.233 0.155 0.000 0.000 chr17 75840699 75860335
view WBP4 209 82 48 22 0 0 0.810 0.318 0.186 0.085 0.000 0.000 chr13 41056509 41089006
view WDCP 162 37 89 62 1 1 0.628 0.143 0.345 0.240 0.004 0.004 chr2 24024347 24052391
view WDFY1 189 76 55 25 0 0 0.733 0.295 0.213 0.097 0.000 0.000 chr2 223870348 223950335
view WDFY2 138 38 87 49 0 0 0.535 0.147 0.337 0.190 0.000 0.000 chr13 51579462 51772709
view WDFY3 120 29 106 55 0 0 0.465 0.112 0.411 0.213 0.000 0.000 chr4 84664597 84971690
view WDFY4 100 15 81 47 0 0 0.388 0.058 0.314 0.182 0.000 0.000 chr10 48679873 48987956
view WDHD1 142 38 90 52 0 0 0.550 0.147 0.349 0.202 0.000 0.000 chr14 54933949 55032099
view WDPCP 107 21 99 58 0 0 0.415 0.081 0.384 0.225 0.000 0.000 chr2 63114559 63593477
view WDR11 192 65 60 36 0 0 0.744 0.252 0.233 0.140 0.000 0.000 chr10 120846362 120914524
view WDR12 191 64 57 36 0 0 0.740 0.248 0.221 0.140 0.000 0.000 chr2 202869261 202916673
view WDR13 91 29 161 71 0 0 0.353 0.112 0.624 0.275 0.000 0.000 chrX 48592492 48613869
view WDR17 177 63 61 35 0 0 0.686 0.244 0.236 0.136 0.000 0.000 chr4 176060841 176187815
view WDR18 227 82 28 21 1 1 0.880 0.318 0.109 0.081 0.004 0.004 chr19 979345 999557
view WDR19 146 48 95 53 0 0 0.566 0.186 0.368 0.205 0.000 0.000 chr4 39177529 39290810
view WDR1 206 67 42 30 0 0 0.798 0.260 0.163 0.116 0.000 0.000 chr4 10069339 10121799
view WDR20 131 31 98 58 0 0 0.508 0.120 0.380 0.225 0.000 0.000 chr14 102134897 102215527
view WDR24 188 56 63 43 0 0 0.729 0.217 0.244 0.167 0.000 0.000 chr16 679622 695398
view WDR25 114 34 101 51 0 0 0.442 0.132 0.391 0.198 0.000 0.000 chr14 100371485 100535303
view WDR26 125 21 107 68 0 0 0.484 0.081 0.415 0.264 0.000 0.000 chr1 224380146 224439797
view WDR27 146 46 84 46 0 0 0.566 0.178 0.326 0.178 0.000 0.000 chr6 169452212 169707029
view WDR31 207 78 47 24 0 0 0.802 0.302 0.182 0.093 0.000 0.000 chr9 113308222 113345275
view WDR33 158 41 86 56 0 0 0.612 0.159 0.333 0.217 0.000 0.000 chr2 127696027 127816171
view WDR35 198 69 49 29 0 0 0.767 0.267 0.190 0.112 0.000 0.000 chr2 19905263 19995105
view WDR36 209 76 39 23 0 0 0.810 0.295 0.151 0.089 0.000 0.000 chr5 111087348 111135502
view WDR37 180 56 57 38 0 0 0.698 0.217 0.221 0.147 0.000 0.000 chr10 1051385 1137372
view WDR38 207 71 47 31 0 0 0.802 0.275 0.182 0.120 0.000 0.000 chr9 124848460 124862878
view WDR3 188 63 59 35 0 0 0.729 0.244 0.229 0.136 0.000 0.000 chr1 117924739 117971543
view WDR41 205 67 41 32 0 0 0.795 0.260 0.159 0.124 0.000 0.000 chr5 77425933 77497316
view WDR43 165 53 75 37 0 0 0.640 0.205 0.291 0.143 0.000 0.000 chr2 28889667 28953219
view WDR44 83 24 162 72 0 0 0.322 0.093 0.628 0.279 0.000 0.000 chrX 118341106 118454961
view WDR45B 190 58 54 37 0 0 0.736 0.225 0.209 0.143 0.000 0.000 chr17 82609562 82653444
view WDR45 71 14 180 84 0 0 0.275 0.054 0.698 0.326 0.000 0.000 chrX 49069442 49084887
view WDR46 186 60 71 44 0 0 0.721 0.233 0.275 0.171 0.000 0.000 chr6 33274108 33294239
view WDR47 171 51 70 42 0 0 0.663 0.198 0.271 0.163 0.000 0.000 chr1 108965214 109047102
view WDR48 178 66 72 31 0 0 0.690 0.256 0.279 0.120 0.000 0.000 chr3 39047016 39101664
view WDR49 104 23 89 45 0 0 0.403 0.089 0.345 0.174 0.000 0.000 chr3 167473684 167658942
view WDR4 199 65 47 28 0 0 0.771 0.252 0.182 0.109 0.000 0.000 chr21 42844226 42884539
view WDR53 192 55 55 41 0 0 0.744 0.213 0.213 0.159 0.000 0.000 chr3 196549177 196573554
view WDR54 196 70 57 31 1 1 0.760 0.271 0.221 0.120 0.004 0.004 chr2 74416730 74430755