Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view VRK1 138 34 105 63 0 0 0.535 0.132 0.407 0.244 0.000 0.000 chr14 96792382 96886609
view VRK2 169 48 62 36 0 0 0.655 0.186 0.240 0.140 0.000 0.000 chr2 58041806 58164871
view VRK3 174 66 65 29 0 0 0.674 0.256 0.252 0.112 0.000 0.000 chr19 49971468 50030372
view VRTN 213 77 40 25 0 0 0.826 0.298 0.155 0.097 0.000 0.000 chr14 74343471 74365008
view VSIG10L2 222 80 32 22 1 0 0.860 0.310 0.124 0.085 0.004 0.000 chr11 125941044 125961319
view VSIG10L 225 81 29 20 1 1 0.872 0.314 0.112 0.078 0.004 0.004 chr19 51326541 51347139
view VSIG10 205 68 39 25 0 0 0.795 0.264 0.151 0.097 0.000 0.000 chr12 118058593 118109011
view VSIG1 74 14 175 84 0 0 0.287 0.054 0.678 0.326 0.000 0.000 chrX 108040065 108084184
view VSIG2 202 69 55 35 0 0 0.783 0.267 0.213 0.136 0.000 0.000 chr11 124742474 124757255
view VSIG4 59 12 146 66 0 0 0.229 0.047 0.566 0.256 0.000 0.000 chrX 66016738 66045080
view VSIG8 228 84 30 21 0 0 0.884 0.326 0.116 0.081 0.000 0.000 chr1 159849316 159867657
view VSIR 230 89 23 14 0 0 0.891 0.345 0.089 0.054 0.000 0.000 chr10 71742556 71778520
view VSNL1 115 18 122 74 0 0 0.446 0.070 0.473 0.287 0.000 0.000 chr2 17535696 17662018
view VSTM1 220 75 29 22 0 0 0.853 0.291 0.112 0.085 0.000 0.000 chr19 54035825 54068897
view VSTM2A 190 54 52 39 0 0 0.736 0.209 0.202 0.151 0.000 0.000 chr7 54537375 54576067
view VSTM2B 203 65 45 33 0 0 0.787 0.252 0.174 0.128 0.000 0.000 chr19 29520994 29569551
view VSTM2L 171 40 62 47 0 0 0.663 0.155 0.240 0.182 0.000 0.000 chr20 37898127 37950350
view VSTM4 139 37 94 58 0 0 0.539 0.143 0.364 0.225 0.000 0.000 chr10 49009236 49120522
view VSTM5 179 55 63 41 0 0 0.694 0.213 0.244 0.159 0.000 0.000 chr11 93813232 93855618
view VSX1 183 53 74 51 0 0 0.709 0.205 0.287 0.198 0.000 0.000 chr20 25070463 25087141
view VSX2 210 76 37 20 0 0 0.814 0.295 0.143 0.078 0.000 0.000 chr14 74234449 74267738
view VTA1 166 56 73 41 0 0 0.643 0.217 0.283 0.159 0.000 0.000 chr6 142142263 142229685
view VTCN1 123 20 98 60 0 0 0.477 0.078 0.380 0.233 0.000 0.000 chr1 117138587 117215927
view VTI1A 83 21 85 44 0 0 0.322 0.081 0.329 0.171 0.000 0.000 chr10 112442215 112823744
view VTI1B 222 78 31 22 0 0 0.860 0.302 0.120 0.085 0.000 0.000 chr14 67642085 67679632
view VTN 194 57 60 45 1 0 0.752 0.221 0.233 0.174 0.004 0.000 chr17 28362284 28375307
view VWA1 139 33 90 49 0 0 0.539 0.128 0.349 0.190 0.000 0.000 chr1 1430690 1447882
view VWA2 122 22 98 56 0 0 0.473 0.085 0.380 0.217 0.000 0.000 chr10 114234254 114299489
view VWA3A 146 46 87 50 0 0 0.566 0.178 0.337 0.194 0.000 0.000 chr16 22087541 22161964
view VWA3B 119 35 77 46 0 0 0.461 0.136 0.298 0.178 0.000 0.000 chr2 98082167 98318299
view VWA5A 211 79 39 21 0 0 0.818 0.306 0.151 0.081 0.000 0.000 chr11 124110450 124152721
view VWA5B1 163 44 72 50 0 0 0.632 0.171 0.279 0.194 0.000 0.000 chr1 20285875 20364518
view VWA5B2 170 52 81 49 0 0 0.659 0.202 0.314 0.190 0.000 0.000 chr3 184224585 184247329
view VWA7 211 68 44 34 1 1 0.818 0.264 0.171 0.132 0.004 0.004 chr6 31760590 31782328
view VWA8 124 35 74 38 0 0 0.481 0.136 0.287 0.147 0.000 0.000 chr13 41561835 41966109
view VWC2L 140 36 84 50 0 0 0.543 0.140 0.326 0.194 0.000 0.000 chr2 214406054 214583976
view VWC2 127 23 90 60 0 0 0.492 0.089 0.349 0.233 0.000 0.000 chr7 49768638 49926950
view VWCE 94 9 145 85 0 0 0.364 0.035 0.562 0.329 0.000 0.000 chr11 61253286 61300316
view VWDE 186 61 57 35 0 0 0.721 0.236 0.221 0.136 0.000 0.000 chr7 12325885 12408865
view VWF 143 31 65 43 0 0 0.554 0.120 0.252 0.167 0.000 0.000 chr12 5943877 6129670
view VXN 165 47 75 49 0 0 0.640 0.182 0.291 0.190 0.000 0.000 chr8 66488566 66523524
view WAC 160 44 81 52 0 0 0.620 0.171 0.314 0.202 0.000 0.000 chr10 28528118 28628112
view WAPL 204 76 45 24 0 0 0.791 0.295 0.174 0.093 0.000 0.000 chr10 86430256 86526792
view WARS1 168 57 71 35 0 0 0.651 0.221 0.275 0.136 0.000 0.000 chr14 100328790 100380347
view WARS2 176 62 67 35 0 0 0.682 0.240 0.260 0.136 0.000 0.000 chr1 119026216 119145653
view WASF1 130 40 107 55 0 0 0.504 0.155 0.415 0.213 0.000 0.000 chr6 110094819 110184670
view WASF2 129 32 101 57 0 0 0.500 0.124 0.391 0.221 0.000 0.000 chr1 27399230 27495167
view WASF3 146 37 90 53 0 0 0.566 0.143 0.349 0.205 0.000 0.000 chr13 26552683 26693948
view WASHC1 0 0 0 0 0 0 0.000 0.000 0.000 0.000 0.000 0.000 chr9 9513 34456
view WASHC2A 154 54 90 42 0 0 0.597 0.209 0.349 0.163 0.000 0.000 chr10 50062954 50138509