Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view USP50 191 62 55 35 0 0 0.740 0.240 0.213 0.136 0.000 0.000 chr15 50495562 50551666
view USP51 85 20 169 82 0 0 0.329 0.078 0.655 0.318 0.000 0.000 chrX 55479616 55494848
view USP53 189 70 62 32 0 0 0.733 0.271 0.240 0.124 0.000 0.000 chr4 119207713 119300518
view USP54 97 27 129 60 0 0 0.376 0.105 0.500 0.233 0.000 0.000 chr10 73492538 73596342
view USP5 194 62 60 39 0 0 0.752 0.240 0.233 0.151 0.000 0.000 chr12 6847150 6871632
view USP6NL 200 73 45 25 0 0 0.775 0.283 0.174 0.097 0.000 0.000 chr10 11455510 11616650
view USP6 180 61 68 38 0 0 0.698 0.236 0.264 0.147 0.000 0.000 chr17 5111032 5179991
view USP7 168 50 67 39 0 0 0.651 0.194 0.260 0.151 0.000 0.000 chr16 8887097 8968906
view USP8 190 68 54 29 0 0 0.736 0.264 0.209 0.112 0.000 0.000 chr15 50419405 50519421
view USP9X 85 25 161 73 0 0 0.329 0.097 0.624 0.283 0.000 0.000 chrX 41080445 41241579
view USP9Y 0 0 124 50 0 0 0.000 0.000 0.481 0.194 0.000 0.000 chrY 12696231 12865839
view USPL1 152 43 93 53 0 0 0.589 0.167 0.360 0.205 0.000 0.000 chr13 30612920 30665766
view UST 104 23 74 41 0 0 0.403 0.089 0.287 0.159 0.000 0.000 chr6 148742030 149081990
view UTF1 201 60 47 35 0 0 0.779 0.233 0.182 0.136 0.000 0.000 chr10 133225217 133236558
view UTP11 183 59 71 43 1 0 0.709 0.229 0.275 0.167 0.004 0.000 chr1 38007734 38029820
view UTP14A 72 16 179 83 0 0 0.279 0.062 0.694 0.322 0.000 0.000 chrX 129901164 129934752
view UTP14C 195 66 62 38 0 0 0.756 0.256 0.240 0.147 0.000 0.000 chr13 52019691 52038600
view UTP15 182 54 67 45 0 0 0.705 0.209 0.260 0.174 0.000 0.000 chr5 73560743 73588380
view UTP18 182 54 62 42 0 0 0.705 0.209 0.240 0.163 0.000 0.000 chr17 51255546 51302933
view UTP20 177 56 72 46 0 0 0.686 0.217 0.279 0.178 0.000 0.000 chr12 101275105 101391618
view UTP23 191 64 58 35 0 0 0.740 0.248 0.225 0.136 0.000 0.000 chr8 116761524 116779684
view UTP25 214 83 36 17 0 0 0.829 0.322 0.140 0.066 0.000 0.000 chr1 209822972 209862565
view UTP3 180 50 72 51 0 0 0.698 0.194 0.279 0.198 0.000 0.000 chr4 70683532 70695551
view UTP4 145 27 91 60 0 0 0.562 0.105 0.353 0.233 0.000 0.000 chr16 69127649 69174021
view UTP6 161 46 82 50 0 0 0.624 0.178 0.318 0.194 0.000 0.000 chr17 31855904 31906708
view UTRN 63 11 96 45 0 0 0.244 0.043 0.372 0.174 0.000 0.000 chr6 144280335 144858034
view UTS2B 200 76 32 16 0 0 0.775 0.295 0.124 0.062 0.000 0.000 chr3 191262168 191335526
view UTS2R 191 60 62 42 1 0 0.740 0.233 0.240 0.163 0.004 0.000 chr17 82366765 82382458
view UTS2 233 94 24 11 0 0 0.903 0.364 0.093 0.043 0.000 0.000 chr1 7842612 7858065
view UTY 0 0 123 50 0 0 0.000 0.000 0.477 0.194 0.000 0.000 chrY 13243385 13485033
view UVRAG 72 14 122 61 0 0 0.279 0.054 0.473 0.236 0.000 0.000 chr11 75810210 76149232
view UVSSA 199 59 40 30 0 0 0.771 0.229 0.155 0.116 0.000 0.000 chr4 1342208 1393049
view UXS1 151 46 84 48 0 0 0.585 0.178 0.326 0.186 0.000 0.000 chr2 106088311 106199301
view UXT 81 22 172 79 0 0 0.314 0.085 0.667 0.306 0.000 0.000 chrX 47646796 47664180
view VAC14 160 43 58 42 0 0 0.620 0.167 0.225 0.163 0.000 0.000 chr16 70682439 70806158
view VAMP1 222 79 31 21 0 0 0.860 0.306 0.120 0.081 0.000 0.000 chr12 6457237 6475677
view VAMP2 206 72 46 28 1 1 0.798 0.279 0.178 0.109 0.004 0.004 chr17 8154149 8167948
view VAMP3 222 88 33 15 1 0 0.860 0.341 0.128 0.058 0.004 0.000 chr1 7766296 7786432
view VAMP4 182 72 62 27 0 0 0.705 0.279 0.240 0.105 0.000 0.000 chr1 171695160 171747065
view VAMP5 216 74 41 30 0 0 0.837 0.287 0.159 0.116 0.000 0.000 chr2 85579431 85598406
view VAMP7 147 34 89 57 1 0 0.570 0.132 0.345 0.221 0.004 0.000 chrX 155876345 155948769
view VAMP8 211 73 45 30 0 0 0.818 0.283 0.174 0.116 0.000 0.000 chr2 85572586 85587031
view VANGL1 201 70 36 19 0 0 0.779 0.271 0.140 0.074 0.000 0.000 chr1 115636970 115703221
view VANGL2 194 63 57 35 0 0 0.752 0.244 0.221 0.136 0.000 0.000 chr1 160395564 160433670
view VAPA 192 64 47 26 0 0 0.744 0.248 0.182 0.101 0.000 0.000 chr18 9909016 9965021
view VAPB 184 62 58 36 0 0 0.713 0.240 0.225 0.140 0.000 0.000 chr20 58384229 58456101
view VARS1 200 61 48 36 0 0 0.775 0.236 0.186 0.140 0.000 0.000 chr6 31772518 31800752
view VARS2 208 71 46 30 0 0 0.806 0.275 0.178 0.116 0.000 0.000 chr6 30909238 30931459
view VASH1 215 72 41 32 0 0 0.833 0.279 0.159 0.124 0.000 0.000 chr14 76756468 76788015
view VASH2 188 67 62 33 0 0 0.729 0.260 0.240 0.128 0.000 0.000 chr1 212945541 212996585