Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
Chr Start End
view UHRF2 158 48 77 48 0 0 0.612 0.186 0.298 0.186 0.000 0.000 chr9 6408199 6512054
view UIMC1 164 54 82 42 0 0 0.636 0.209 0.318 0.163 0.000 0.000 chr5 176900006 177011779
view ULBP1 219 78 27 17 2 1 0.849 0.302 0.105 0.066 0.008 0.004 chr6 149958943 149978715
view ULBP2 222 84 35 21 0 0 0.860 0.326 0.136 0.081 0.000 0.000 chr6 149937014 149954235
view ULBP3 228 88 28 16 0 0 0.884 0.341 0.109 0.062 0.000 0.000 chr6 150056053 150074121
view ULK1 171 50 59 33 0 0 0.663 0.194 0.229 0.128 0.000 0.000 chr12 131889622 131928150
view ULK2 143 52 79 37 0 0 0.554 0.202 0.306 0.143 0.000 0.000 chr17 19765830 19872936
view ULK3 219 84 38 20 0 0 0.849 0.326 0.147 0.078 0.000 0.000 chr15 74831118 74848156
view ULK4 35 0 113 66 0 0 0.136 0.000 0.438 0.256 0.000 0.000 chr3 41241599 41967103
view UMAD1 124 27 66 46 0 0 0.481 0.105 0.256 0.178 0.000 0.000 chr7 7635752 7884223
view UMODL1 199 63 40 28 0 0 0.771 0.244 0.155 0.109 0.000 0.000 chr21 42066317 42147996
view UMOD 201 64 53 37 0 0 0.779 0.248 0.205 0.143 0.000 0.000 chr16 20328051 20357715
view UMPS 216 78 39 26 0 0 0.837 0.302 0.151 0.101 0.000 0.000 chr3 124725452 124754273
view UNC119B 198 69 54 33 0 0 0.767 0.267 0.209 0.128 0.000 0.000 chr12 120705458 120728640
view UNC119 192 61 63 41 0 0 0.744 0.236 0.244 0.159 0.000 0.000 chr17 28541708 28557624
view UNC13A 159 32 60 43 0 0 0.616 0.124 0.233 0.167 0.000 0.000 chr19 17596336 17693354
view UNC13B 111 28 107 60 0 0 0.430 0.109 0.415 0.233 0.000 0.000 chr9 35157009 35410335
view UNC13C 78 13 75 34 0 0 0.302 0.050 0.291 0.132 0.000 0.000 chr15 53973441 54633605
view UNC13D 205 67 45 33 0 0 0.795 0.260 0.174 0.128 0.000 0.000 chr17 75822225 75849404
view UNC45A 197 60 56 40 0 0 0.764 0.233 0.217 0.155 0.000 0.000 chr15 90930285 90959093
view UNC45B 216 78 34 20 0 0 0.837 0.302 0.132 0.078 0.000 0.000 chr17 35142817 35194343
view UNC50 206 71 50 33 1 1 0.798 0.275 0.194 0.128 0.004 0.004 chr2 98603589 98623515
view UNC5A 133 24 89 56 0 0 0.516 0.093 0.345 0.217 0.000 0.000 chr5 176805559 176885898
view UNC5B 183 59 50 29 0 0 0.709 0.229 0.194 0.112 0.000 0.000 chr10 71207570 71307864
view UNC5CL 191 67 64 37 0 0 0.740 0.260 0.248 0.143 0.000 0.000 chr6 41021895 41044221
view UNC5C 102 25 77 44 0 0 0.395 0.097 0.298 0.171 0.000 0.000 chr4 95157504 95553973
view UNC5D 32 1 122 55 0 0 0.124 0.004 0.473 0.213 0.000 0.000 chr8 35230475 35801540
view UNC79 96 17 102 53 0 0 0.372 0.066 0.395 0.205 0.000 0.000 chr14 93425939 93712876
view UNC80 93 13 108 64 0 0 0.360 0.050 0.419 0.248 0.000 0.000 chr2 209766832 210004296
view UNC93A 223 78 31 23 0 0 0.864 0.302 0.120 0.089 0.000 0.000 chr6 167286315 167321014
view UNC93B1 184 57 66 43 0 0 0.713 0.221 0.256 0.167 0.000 0.000 chr11 67986100 68009097
view UNCX 202 68 48 30 0 0 0.783 0.264 0.186 0.116 0.000 0.000 chr7 1227872 1242326
view UNG 225 91 32 14 0 0 0.872 0.353 0.124 0.054 0.000 0.000 chr12 109092597 109115992
view UNKL 160 37 69 47 0 0 0.620 0.143 0.267 0.182 0.000 0.000 chr16 1358205 1419704
view UNK 178 66 69 33 0 0 0.690 0.256 0.267 0.128 0.000 0.000 chr17 75779806 75830799
view UPB1 175 48 64 41 0 0 0.678 0.186 0.248 0.159 0.000 0.000 chr22 24490332 24533390
view UPF1 196 71 51 26 0 0 0.760 0.275 0.198 0.101 0.000 0.000 chr19 18826959 18873230
view UPF2 166 57 66 34 0 0 0.643 0.221 0.256 0.132 0.000 0.000 chr10 11915022 12047809
view UPF3A 224 83 28 17 0 0 0.868 0.322 0.109 0.066 0.000 0.000 chr13 114276601 114310817
view UPF3B 75 17 176 82 0 0 0.291 0.066 0.682 0.318 0.000 0.000 chrX 119829022 119857963
view UPK1A 209 71 47 32 0 0 0.810 0.275 0.182 0.124 0.000 0.000 chr19 35661517 35683481
view UPK1B 210 79 38 19 1 1 0.814 0.306 0.147 0.074 0.004 0.004 chr3 119168598 119210143
view UPK2 198 70 54 31 0 0 0.767 0.271 0.209 0.120 0.000 0.000 chr11 118951298 118963559
view UPK3A 221 80 35 23 0 0 0.857 0.310 0.136 0.089 0.000 0.000 chr22 45279949 45300874
view UPK3BL1 70 37 44 25 125 31 0.271 0.143 0.171 0.097 0.484 0.120 chr7 102632025 102647791
view UPK3BL2 90 33 70 44 73 7 0.349 0.128 0.271 0.171 0.283 0.027 chr7 102532919 102548696
view UPK3B 169 50 73 45 1 0 0.655 0.194 0.283 0.174 0.004 0.000 chr7 76505552 76521522
view UPP1 213 76 42 27 0 0 0.826 0.295 0.163 0.105 0.000 0.000 chr7 48084265 48113736
view UPP2 170 53 74 45 0 0 0.659 0.205 0.287 0.174 0.000 0.000 chr2 158096876 158141154
view UPRT 63 2 185 95 0 0 0.244 0.008 0.717 0.368 0.000 0.000 chrX 75269085 75309885