Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view U2SURP 188 66 54 27 0 0 0.729 0.256 0.209 0.105 0.000 0.000 chr3 142996570 143065725
view UACA 154 52 79 40 0 0 0.597 0.202 0.306 0.155 0.000 0.000 chr15 70649554 70768558
view UAP1L1 190 56 59 43 1 0 0.736 0.217 0.229 0.167 0.004 0.000 chr9 137072517 137089538
view UAP1 205 75 44 22 0 0 0.795 0.291 0.171 0.085 0.000 0.000 chr1 162556722 162606240
view UBA1 76 17 171 80 0 0 0.295 0.066 0.663 0.310 0.000 0.000 chrX 47188829 47220128
view UBA2 159 38 84 55 0 0 0.616 0.147 0.326 0.213 0.000 0.000 chr19 34423381 34476251
view UBA3 209 75 43 25 0 0 0.810 0.291 0.167 0.097 0.000 0.000 chr3 69049730 69085365
view UBA52 205 65 47 37 1 0 0.795 0.252 0.182 0.143 0.004 0.000 chr19 18566857 18582550
view UBA5 168 64 84 37 0 0 0.651 0.248 0.326 0.143 0.000 0.000 chr3 132655329 132684794
view UBA6 161 48 75 47 0 0 0.624 0.186 0.291 0.182 0.000 0.000 chr4 67607652 67706155
view UBA7 171 47 85 57 1 0 0.663 0.182 0.329 0.221 0.004 0.000 chr3 49800209 49818953
view UBAC1 188 56 61 41 0 0 0.729 0.217 0.236 0.159 0.000 0.000 chr9 135927969 135966373
view UBAC2 189 66 54 34 0 0 0.733 0.256 0.209 0.132 0.000 0.000 chr13 99195854 99391504
view UBALD1 169 49 83 52 0 0 0.655 0.190 0.322 0.202 0.000 0.000 chr16 4603884 4619888
view UBALD2 204 68 51 34 0 0 0.791 0.264 0.198 0.132 0.000 0.000 chr17 76260348 76276298
view UBAP1L 115 18 126 74 0 0 0.446 0.070 0.488 0.287 0.000 0.000 chr15 65087760 65120200
view UBAP1 170 44 70 46 0 0 0.659 0.171 0.271 0.178 0.000 0.000 chr9 34174043 34257523
view UBAP2L 174 53 72 45 0 0 0.674 0.205 0.279 0.174 0.000 0.000 chr1 154215955 154275847
view UBAP2 177 53 66 42 0 0 0.686 0.205 0.256 0.163 0.000 0.000 chr9 33916693 34053887
view UBASH3A 203 65 44 31 0 0 0.787 0.252 0.171 0.120 0.000 0.000 chr21 42398902 42452684
view UBASH3B 144 39 64 45 0 0 0.558 0.151 0.248 0.174 0.000 0.000 chr11 122650722 122819473
view UBB 175 49 78 54 1 0 0.678 0.190 0.302 0.209 0.004 0.000 chr17 16376091 16387740
view UBC 222 83 33 21 3 1 0.860 0.322 0.128 0.081 0.012 0.004 chr12 124906646 124919650
view UBD 231 86 23 15 1 1 0.895 0.333 0.089 0.058 0.004 0.004 chr6 29550515 29564732
view UBE2A 101 28 155 75 0 0 0.391 0.109 0.601 0.291 0.000 0.000 chrX 119569563 119589423
view UBE2B 140 31 103 64 0 0 0.543 0.120 0.399 0.248 0.000 0.000 chr5 134366569 134397108
view UBE2C 217 79 39 24 0 0 0.841 0.306 0.151 0.093 0.000 0.000 chr20 45807644 45821952
view UBE2D1 195 70 60 34 0 0 0.756 0.271 0.233 0.132 0.000 0.000 chr10 58330006 58375748
view UBE2D2 112 22 130 71 0 0 0.434 0.085 0.504 0.275 0.000 0.000 chr5 139556339 139633434
view UBE2D3 183 64 59 31 0 0 0.709 0.248 0.229 0.120 0.000 0.000 chr4 102789383 102832551
view UBE2D4 193 70 59 29 0 0 0.748 0.271 0.229 0.112 0.000 0.000 chr7 43921436 43961136
view UBE2E1 184 58 62 38 0 0 0.713 0.225 0.240 0.147 0.000 0.000 chr3 23800955 23896640
view UBE2E2 168 58 65 38 0 0 0.651 0.225 0.252 0.147 0.000 0.000 chr3 23198327 23596794
view UBE2E3 168 47 79 53 0 0 0.651 0.182 0.306 0.205 0.000 0.000 chr2 180975605 181068425
view UBE2F 183 63 60 33 0 0 0.709 0.244 0.233 0.128 0.000 0.000 chr2 237962014 238047782
view UBE2G1 135 42 103 52 0 0 0.523 0.163 0.399 0.202 0.000 0.000 chr17 4264259 4371675
view UBE2G2 183 58 68 41 0 0 0.709 0.225 0.264 0.159 0.000 0.000 chr21 44763580 44806820
view UBE2H 144 32 88 57 0 0 0.558 0.124 0.341 0.221 0.000 0.000 chr7 129825732 129957960
view UBE2I 181 47 60 44 0 0 0.702 0.182 0.233 0.171 0.000 0.000 chr16 1304636 1332017
view UBE2J1 204 71 49 30 0 0 0.791 0.275 0.190 0.116 0.000 0.000 chr6 89321625 89357722
view UBE2J2 161 50 77 37 0 0 0.624 0.194 0.298 0.143 0.000 0.000 chr1 1248912 1278854
view UBE2K 167 52 72 40 0 0 0.647 0.202 0.279 0.155 0.000 0.000 chr4 39693136 39787792
view UBE2L3 175 58 61 36 0 0 0.678 0.225 0.236 0.140 0.000 0.000 chr22 21562714 21629034
view UBE2L5 214 70 43 34 0 0 0.829 0.271 0.167 0.132 0.000 0.000 chr13 30417493 30434758
view UBE2L6 183 58 68 41 0 0 0.709 0.225 0.264 0.159 0.000 0.000 chr11 57546662 57572672
view UBE2M 204 76 48 25 1 0 0.791 0.295 0.186 0.097 0.004 0.000 chr19 58550712 58563611
view UBE2N 185 62 57 32 0 0 0.717 0.240 0.221 0.124 0.000 0.000 chr12 93400684 93446947
view UBE2O 181 58 67 40 0 0 0.702 0.225 0.260 0.155 0.000 0.000 chr17 76384456 76458152
view UBE2Q1 182 54 68 44 0 0 0.705 0.209 0.264 0.171 0.000 0.000 chr1 154543577 154563662
view UBE2Q2 177 64 63 33 0 0 0.686 0.248 0.244 0.128 0.000 0.000 chr15 75838447 75906078