Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TUSC3 185 65 51 26 0 0 0.717 0.252 0.198 0.101 0.000 0.000 chr8 15535263 15771638
view TUT1 145 29 98 62 0 0 0.562 0.112 0.380 0.240 0.000 0.000 chr11 62570052 62596523
view TUT4 124 33 111 61 0 0 0.481 0.128 0.430 0.236 0.000 0.000 chr1 52418275 52558092
view TUT7 180 60 65 36 0 0 0.698 0.233 0.252 0.140 0.000 0.000 chr9 86282733 86359410
view TVP23A 204 63 29 24 0 0 0.791 0.244 0.112 0.093 0.000 0.000 chr16 10761675 10823794
view TVP23B 218 79 32 20 0 0 0.845 0.306 0.124 0.078 0.000 0.000 chr17 18776183 18811714
view TVP23C 211 76 38 23 0 0 0.818 0.295 0.147 0.089 0.000 0.000 chr17 15531980 15568483
view TWF1 190 59 63 43 0 0 0.736 0.229 0.244 0.167 0.000 0.000 chr12 43788723 43811317
view TWF2 182 58 66 40 1 1 0.705 0.225 0.256 0.155 0.004 0.004 chr3 52223612 52244158
view TWIST1 215 77 43 28 0 0 0.833 0.298 0.167 0.109 0.000 0.000 chr7 19110468 19122636
view TWIST2 168 44 63 40 0 0 0.651 0.171 0.244 0.155 0.000 0.000 chr2 238843085 238915534
view TWNK 192 63 61 38 0 0 0.744 0.244 0.236 0.147 0.000 0.000 chr10 100982543 100999403
view TWSG1 176 59 66 36 0 0 0.682 0.229 0.256 0.140 0.000 0.000 chr18 9329773 9407420
view TXK 180 55 63 43 0 0 0.698 0.213 0.244 0.167 0.000 0.000 chr4 48061393 48139250
view TXLNA 176 54 69 44 0 0 0.682 0.209 0.267 0.171 0.000 0.000 chr1 32174675 32203285
view TXLNB 146 37 79 48 0 0 0.566 0.143 0.306 0.186 0.000 0.000 chr6 139235061 139296998
view TXLNG 70 17 173 77 0 0 0.271 0.066 0.671 0.298 0.000 0.000 chrX 16781466 16849519
view TXN2 169 58 84 45 0 0 0.655 0.225 0.326 0.174 0.000 0.000 chr22 36462046 36486640
view TXNDC11 186 66 51 28 0 0 0.721 0.256 0.198 0.109 0.000 0.000 chr16 11674083 11747857
view TXNDC12 125 28 118 66 0 0 0.484 0.109 0.457 0.256 0.000 0.000 chr1 52015131 52060191
view TXNDC15 208 74 42 26 0 0 0.806 0.287 0.163 0.101 0.000 0.000 chr5 134869371 134906635
view TXNDC16 118 43 99 49 0 0 0.457 0.167 0.384 0.190 0.000 0.000 chr14 52425596 52557505
view TXNDC17 209 74 46 28 1 1 0.810 0.287 0.178 0.109 0.004 0.004 chr17 6636060 6649541
view TXNDC2 213 76 39 24 0 0 0.826 0.295 0.151 0.093 0.000 0.000 chr18 9880973 9894275
view TXNDC5 200 64 47 34 0 0 0.775 0.248 0.182 0.132 0.000 0.000 chr6 7876517 7915788
view TXNDC8 207 70 36 22 0 0 0.802 0.271 0.140 0.085 0.000 0.000 chr9 110298476 110342863
view TXNDC9 184 56 68 45 0 0 0.713 0.217 0.264 0.174 0.000 0.000 chr2 99313982 99341333
view TXNIP 203 77 55 28 0 0 0.787 0.298 0.213 0.109 0.000 0.000 chr1 145987435 146001579
view TXNL1 170 62 79 40 0 0 0.659 0.240 0.306 0.155 0.000 0.000 chr18 56592209 56643592
view TXNL4A 194 66 53 31 0 0 0.752 0.256 0.205 0.120 0.000 0.000 chr18 79965813 79993563
view TXNL4B 205 74 51 29 1 1 0.795 0.287 0.198 0.112 0.004 0.004 chr16 72079857 72098620
view TXNRD1 150 39 82 54 0 0 0.581 0.151 0.318 0.209 0.000 0.000 chr12 104210779 104355307
view TXNRD2 185 55 50 32 0 0 0.717 0.213 0.194 0.124 0.000 0.000 chr22 19870522 19946818
view TXNRD3 176 50 73 48 0 0 0.682 0.194 0.283 0.186 0.000 0.000 chr3 126602050 126660124
view TXN 232 86 23 16 0 0 0.899 0.333 0.089 0.062 0.000 0.000 chr9 110238810 110261507
view TYK2 187 55 58 40 0 0 0.725 0.213 0.225 0.155 0.000 0.000 chr19 10345533 10385572
view TYMP 205 68 46 32 3 1 0.795 0.264 0.178 0.124 0.012 0.004 chr22 50520752 50535012
view TYMS 240 92 15 10 0 0 0.930 0.357 0.058 0.039 0.000 0.000 chr18 652653 678578
view TYRO3 161 37 80 56 0 0 0.624 0.143 0.310 0.217 0.000 0.000 chr15 41554212 41588589
view TYROBP 202 60 51 40 0 0 0.783 0.233 0.198 0.155 0.000 0.000 chr19 35899403 35913295
view TYRP1 218 78 32 21 1 0 0.845 0.302 0.124 0.081 0.004 0.000 chr9 12688385 12715285
view TYR 152 50 87 44 0 0 0.589 0.194 0.337 0.171 0.000 0.000 chr11 89172875 89300759
view TYSND1 228 81 28 23 1 1 0.884 0.314 0.109 0.089 0.004 0.004 chr10 70132981 70151700
view TYW1B 142 47 84 43 0 0 0.550 0.182 0.326 0.167 0.000 0.000 chr7 72569513 72833200
view TYW1 181 62 60 39 0 0 0.702 0.240 0.233 0.151 0.000 0.000 chr7 66991833 67244514
view TYW3 165 50 86 51 0 0 0.640 0.194 0.333 0.198 0.000 0.000 chr1 74728152 74771677
view TYW5 191 74 59 26 1 1 0.740 0.287 0.229 0.101 0.004 0.004 chr2 199923913 199960491
view U2AF1L4 201 64 55 39 0 0 0.779 0.248 0.213 0.151 0.000 0.000 chr19 35737527 35750418
view U2AF1 75 30 145 68 0 0 0.291 0.116 0.562 0.264 0.000 0.000 chr21 43087956 43112570
view U2AF2 196 58 52 39 0 0 0.760 0.225 0.202 0.151 0.000 0.000 chr19 55650035 55679716