Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TTLL9 131 17 106 74 0 0 0.508 0.066 0.411 0.287 0.000 0.000 chr20 31865634 31950000
view TTL 173 55 66 36 0 0 0.671 0.213 0.256 0.140 0.000 0.000 chr2 112477156 112546739
view TTN 120 29 90 47 0 0 0.465 0.112 0.349 0.182 0.000 0.000 chr2 178520989 178812423
view TTN 184 61 63 34 0 0 0.713 0.236 0.244 0.132 0.000 0.000 chr2 178739405 178812423
view TTPAL 166 41 86 59 0 0 0.643 0.159 0.333 0.229 0.000 0.000 chr20 44470874 44499603
view TTPA 215 81 39 22 0 0 0.833 0.314 0.151 0.085 0.000 0.000 chr8 63054488 63091053
view TTR 204 76 51 27 0 0 0.791 0.295 0.198 0.105 0.000 0.000 chr18 31586877 31603821
view TTYH1 164 41 79 51 0 0 0.636 0.159 0.306 0.198 0.000 0.000 chr19 54410464 54441904
view TTYH2 175 44 61 44 0 0 0.678 0.171 0.236 0.171 0.000 0.000 chr17 74208571 74267020
view TTYH3 200 59 43 34 0 0 0.775 0.229 0.167 0.132 0.000 0.000 chr7 2626986 2669802
view TUBA1A 180 60 74 41 0 0 0.698 0.233 0.287 0.159 0.000 0.000 chr12 49179795 49194080
view TUBA1B 191 68 64 35 1 1 0.740 0.264 0.248 0.136 0.004 0.004 chr12 49122782 49136395
view TUBA1C 194 63 56 35 0 0 0.752 0.244 0.217 0.136 0.000 0.000 chr12 49260082 49279600
view TUBA3C 223 81 31 21 2 1 0.864 0.314 0.120 0.081 0.008 0.004 chr13 19168772 19186824
view TUBA3D 195 56 58 45 0 0 0.756 0.217 0.225 0.174 0.000 0.000 chr2 131471119 131487934
view TUBA3E 213 74 40 27 2 1 0.826 0.287 0.155 0.105 0.008 0.004 chr2 130186745 130203439
view TUBA4A 187 58 69 46 0 0 0.725 0.225 0.267 0.178 0.000 0.000 chr2 219244710 219258918
view TUBA4B 174 47 69 45 0 0 0.674 0.182 0.267 0.174 0.000 0.000 chr2 219248243 219277197
view TUBA8 212 73 35 22 1 1 0.822 0.283 0.136 0.085 0.004 0.004 chr22 18105809 18136732
view TUBAL3 207 77 44 23 0 0 0.802 0.298 0.171 0.089 0.000 0.000 chr10 5388101 5409828
view TUBB1 200 58 55 44 0 0 0.775 0.225 0.213 0.171 0.000 0.000 chr20 59014429 59031654
view TUBB2A 206 80 46 21 0 0 0.798 0.310 0.178 0.081 0.000 0.000 chr6 3148666 3162544
view TUBB2B 179 55 71 44 0 0 0.694 0.213 0.275 0.171 0.000 0.000 chr6 3219277 3232653
view TUBB3 198 56 53 43 0 0 0.767 0.217 0.205 0.167 0.000 0.000 chr16 89918342 89941097
view TUBB4A 213 70 42 32 0 0 0.826 0.271 0.163 0.124 0.000 0.000 chr19 6489319 6507309
view TUBB4B 208 65 44 35 1 0 0.806 0.252 0.171 0.136 0.004 0.000 chr9 137236287 137248707
view TUBB6 200 71 50 32 0 0 0.775 0.275 0.194 0.124 0.000 0.000 chr18 12303241 12331616
view TUBB8B 197 68 56 33 2 1 0.764 0.264 0.217 0.128 0.008 0.004 chr18 42221 54615
view TUBB8 201 69 53 34 0 0 0.779 0.267 0.205 0.132 0.000 0.000 chr10 41888 54296
view TUBB 215 71 42 33 1 1 0.833 0.275 0.163 0.128 0.004 0.004 chr6 30715352 30730422
view TUBD1 179 57 69 43 0 0 0.694 0.221 0.267 0.167 0.000 0.000 chr17 59854479 59897943
view TUBE1 209 74 45 27 0 0 0.810 0.287 0.174 0.105 0.000 0.000 chr6 112065663 112092482
view TUBG1 193 64 60 37 2 1 0.748 0.248 0.233 0.143 0.008 0.004 chr17 42604683 42620238
view TUBG2 184 53 66 45 0 0 0.713 0.205 0.256 0.174 0.000 0.000 chr17 42654284 42672006
view TUBGCP2 141 23 83 53 0 0 0.547 0.089 0.322 0.205 0.000 0.000 chr10 133273635 133313872
view TUBGCP3 155 54 81 43 0 0 0.601 0.209 0.314 0.167 0.000 0.000 chr13 112480011 112593153
view TUBGCP4 167 58 78 37 0 0 0.647 0.225 0.302 0.143 0.000 0.000 chr15 43366101 43414771
view TUBGCP5 175 54 72 47 0 0 0.678 0.209 0.279 0.182 0.000 0.000 chr15 22994177 23044569
view TUBGCP6 217 75 28 19 0 0 0.841 0.291 0.109 0.074 0.000 0.000 chr22 50212694 50250023
view TUB 227 86 27 15 0 0 0.880 0.333 0.105 0.058 0.000 0.000 chr11 8076211 8111243
view TUFM 197 75 54 27 1 0 0.764 0.291 0.209 0.105 0.004 0.000 chr16 28837411 28851348
view TUFT1 182 58 57 34 0 0 0.705 0.225 0.221 0.132 0.000 0.000 chr1 151535309 151588583
view TUG1 218 80 38 23 0 0 0.845 0.310 0.147 0.089 0.000 0.000 chr22 30964265 30984395
view TULP1 206 74 48 27 1 1 0.798 0.287 0.186 0.105 0.004 0.004 chr6 35492874 35517896
view TULP2 181 62 65 33 0 0 0.702 0.240 0.252 0.128 0.000 0.000 chr19 48875967 48903744
view TULP3 185 63 53 30 0 0 0.717 0.244 0.205 0.116 0.000 0.000 chr12 2885891 2946138
view TULP4 133 38 84 48 0 0 0.516 0.147 0.326 0.186 0.000 0.000 chr6 158307465 158516828
view TUNAR 168 55 67 37 0 0 0.651 0.213 0.260 0.143 0.000 0.000 chr14 95871832 95930571
view TUSC1 227 84 29 20 1 0 0.880 0.326 0.112 0.078 0.004 0.000 chr9 25671969 25683444
view TUSC2 197 64 57 37 0 0 0.764 0.248 0.221 0.143 0.000 0.000 chr3 50319909 50333223