Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TRPM4 155 33 78 54 0 0 0.601 0.128 0.302 0.209 0.000 0.000 chr19 49152792 49216836
view TRPM5 212 68 32 24 0 0 0.822 0.264 0.124 0.093 0.000 0.000 chr11 2399515 2449514
view TRPM6 142 41 69 39 0 0 0.550 0.159 0.267 0.151 0.000 0.000 chr9 74717495 74892921
view TRPM7 175 55 73 44 0 0 0.678 0.213 0.283 0.171 0.000 0.000 chr15 50552158 50691797
view TRPM8 160 47 57 31 0 0 0.620 0.182 0.221 0.120 0.000 0.000 chr2 233912373 234024522
view TRPS1 95 20 94 54 0 0 0.368 0.078 0.364 0.209 0.000 0.000 chr8 115403496 115673975
view TRPT1 195 68 58 32 0 0 0.756 0.264 0.225 0.124 0.000 0.000 chr11 64218816 64231186
view TRPV1 195 65 44 26 0 0 0.756 0.252 0.171 0.101 0.000 0.000 chr17 3560446 3614411
view TRPV2 188 55 65 45 0 0 0.729 0.213 0.252 0.174 0.000 0.000 chr17 16410571 16442003
view TRPV3 201 56 37 31 0 0 0.779 0.217 0.143 0.120 0.000 0.000 chr17 3505502 3562812
view TRPV4 171 44 77 54 0 0 0.663 0.171 0.298 0.209 0.000 0.000 chr12 109778089 109838398
view TRPV5 126 24 118 70 0 0 0.488 0.093 0.457 0.271 0.000 0.000 chr7 142903101 142938746
view TRPV6 132 24 120 76 0 0 0.512 0.093 0.465 0.295 0.000 0.000 chr7 142866208 142890745
view TRRAP 130 39 86 47 0 0 0.504 0.151 0.333 0.182 0.000 0.000 chr7 98873532 99018241
view TRUB1 118 20 126 79 0 0 0.457 0.078 0.488 0.306 0.000 0.000 chr10 114933195 114982676
view TRUB2 188 73 62 27 0 0 0.729 0.283 0.240 0.105 0.000 0.000 chr9 128300159 128327447
view TSACC 192 68 64 36 1 0 0.744 0.264 0.248 0.140 0.004 0.000 chr1 156333526 156351995
view TSBP1 210 81 43 21 0 0 0.814 0.314 0.167 0.081 0.000 0.000 chr6 32287698 32376903
view TSC1 167 56 75 41 0 0 0.647 0.217 0.291 0.159 0.000 0.000 chr9 132886349 132949616
view TSC22D1 119 33 90 53 0 0 0.461 0.128 0.349 0.205 0.000 0.000 chr13 44427143 44581330
view TSC22D2 201 73 50 28 0 0 0.779 0.283 0.194 0.109 0.000 0.000 chr3 150403298 150471422
view TSC22D3 44 6 195 88 0 0 0.171 0.023 0.756 0.341 0.000 0.000 chrX 107708221 107780787
view TSC22D4 188 56 61 43 0 0 0.729 0.217 0.236 0.167 0.000 0.000 chr7 100461519 100484214
view TSC2 158 28 69 52 0 0 0.612 0.109 0.267 0.202 0.000 0.000 chr16 2042985 2094491
view TSEN15 210 78 38 20 0 0 0.814 0.302 0.147 0.078 0.000 0.000 chr1 184046730 184079212
view TSEN2 141 29 100 68 0 0 0.547 0.112 0.388 0.264 0.000 0.000 chr3 12479480 12538658
view TSEN34 215 72 37 27 0 0 0.833 0.279 0.143 0.105 0.000 0.000 chr19 54186308 54199532
view TSEN54 211 67 45 36 0 0 0.818 0.260 0.174 0.140 0.000 0.000 chr17 75511528 75529735
view TSFM 183 52 65 44 1 0 0.709 0.202 0.252 0.171 0.004 0.000 chr12 57777787 57802587
view TSG101 202 73 43 27 0 0 0.783 0.283 0.167 0.105 0.000 0.000 chr11 18475311 18531942
view TSGA10IP 195 66 58 34 0 0 0.756 0.256 0.225 0.132 0.000 0.000 chr11 65940480 65964966
view TSGA10 161 52 73 43 0 0 0.624 0.202 0.283 0.167 0.000 0.000 chr2 98992261 99159942
view TSGA13 192 58 60 44 0 0 0.744 0.225 0.233 0.171 0.000 0.000 chr7 130663643 130691545
view TSHB 213 79 43 25 0 0 0.826 0.306 0.167 0.097 0.000 0.000 chr1 115024826 115039302
view TSHR 134 38 76 41 0 0 0.519 0.147 0.295 0.159 0.000 0.000 chr14 80950621 81151306
view TSHZ1 162 46 54 37 0 0 0.628 0.178 0.209 0.143 0.000 0.000 chr18 75205797 75294944
view TSHZ2 87 19 81 43 0 0 0.337 0.074 0.314 0.167 0.000 0.000 chr20 52967358 53500330
view TSHZ3 170 53 62 33 0 0 0.659 0.205 0.240 0.128 0.000 0.000 chr19 31269945 31354436
view TSKS 208 67 39 29 0 0 0.806 0.260 0.151 0.112 0.000 0.000 chr19 49734760 49768306
view TSKU 214 74 41 29 0 0 0.829 0.287 0.159 0.112 0.000 0.000 chr11 76778356 76803144
view TSLP 235 93 21 10 1 1 0.911 0.360 0.081 0.039 0.004 0.004 chr5 111066713 111083026
view TSNARE1 118 20 75 40 0 0 0.457 0.078 0.291 0.155 0.000 0.000 chr8 142207080 142408182
view TSNAXIP1 127 24 117 71 1 0 0.492 0.093 0.453 0.275 0.004 0.000 chr16 67801889 67833068
view TSNAX 195 64 49 30 0 0 0.756 0.248 0.190 0.116 0.000 0.000 chr1 231523669 231571524
view TSN 194 67 56 32 0 0 0.752 0.260 0.217 0.124 0.000 0.000 chr2 121750651 121772853
view TSPAN10 204 68 48 33 0 0 0.791 0.264 0.186 0.128 0.000 0.000 chr17 81632196 81653749
view TSPAN11 196 60 44 33 0 0 0.760 0.233 0.171 0.128 0.000 0.000 chr12 30921748 31001599
view TSPAN12 146 49 97 47 0 0 0.566 0.190 0.376 0.182 0.000 0.000 chr7 120782320 120863144
view TSPAN13 219 75 29 23 0 0 0.849 0.291 0.112 0.089 0.000 0.000 chr7 16748755 16789536
view TSPAN14 125 13 96 69 0 0 0.484 0.050 0.372 0.267 0.000 0.000 chr10 80449310 80527631