Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TRIM9 170 51 51 35 0 0 0.659 0.198 0.198 0.136 0.000 0.000 chr14 50970266 51100105
view TRIML1 113 31 110 53 0 0 0.438 0.120 0.426 0.205 0.000 0.000 chr4 188134441 188152743
view TRIML2 214 73 35 24 0 0 0.829 0.283 0.136 0.093 0.000 0.000 chr4 188086272 188114603
view TRIOBP 160 41 74 48 0 0 0.620 0.159 0.287 0.186 0.000 0.000 chr22 37692048 37781556
view TRIO 98 15 98 56 0 0 0.380 0.058 0.380 0.217 0.000 0.000 chr5 14138342 14515204
view TRIP10 220 69 33 31 0 0 0.853 0.267 0.128 0.120 0.000 0.000 chr19 6734680 6756530
view TRIP11 181 58 63 37 0 0 0.702 0.225 0.244 0.143 0.000 0.000 chr14 91960991 92045059
view TRIP12 164 43 70 46 0 0 0.636 0.167 0.271 0.178 0.000 0.000 chr2 229758837 229927009
view TRIP13 200 63 48 34 0 0 0.775 0.244 0.186 0.132 0.000 0.000 chr5 887884 923120
view TRIP4 109 13 123 79 0 0 0.422 0.050 0.477 0.306 0.000 0.000 chr15 64382836 64460303
view TRIP6 215 78 38 23 1 0 0.833 0.302 0.147 0.089 0.004 0.000 chr7 100862387 100878454
view TRIQK 170 59 68 36 0 0 0.659 0.229 0.264 0.140 0.000 0.000 chr8 92878534 92971144
view TRIR 131 24 117 74 0 0 0.508 0.093 0.453 0.287 0.000 0.000 chr19 12725640 12739684
view TRIT1 188 70 62 31 0 0 0.729 0.271 0.240 0.120 0.000 0.000 chr1 39833110 39888504
view TRMO 186 59 66 40 0 0 0.721 0.229 0.256 0.155 0.000 0.000 chr9 97899489 97927500
view TRMT10A 191 77 67 28 0 0 0.740 0.298 0.260 0.109 0.000 0.000 chr4 99541711 99569039
view TRMT10B 193 63 60 40 0 0 0.748 0.244 0.233 0.155 0.000 0.000 chr9 37748805 37783972
view TRMT10C 214 77 42 26 0 0 0.829 0.298 0.163 0.101 0.000 0.000 chr3 101556868 101571446
view TRMT112 188 58 64 42 0 0 0.729 0.225 0.248 0.163 0.000 0.000 chr11 64311460 64322559
view TRMT11 95 12 143 83 0 0 0.368 0.047 0.554 0.322 0.000 0.000 chr6 125981540 126044276
view TRMT12 202 74 53 29 0 0 0.783 0.287 0.205 0.112 0.000 0.000 chr8 124445820 124458026
view TRMT13 178 51 73 47 0 0 0.690 0.198 0.283 0.182 0.000 0.000 chr1 100128163 100155496
view TRMT1L 180 64 72 40 0 0 0.698 0.248 0.279 0.155 0.000 0.000 chr1 185113101 185161953
view TRMT1 186 43 60 52 0 0 0.721 0.167 0.233 0.202 0.000 0.000 chr19 13099907 13121740
view TRMT2A 220 84 33 17 2 1 0.853 0.326 0.128 0.066 0.008 0.004 chr22 20106875 20122226
view TRMT2B 68 14 173 79 0 0 0.264 0.054 0.671 0.306 0.000 0.000 chrX 101004350 101057111
view TRMT44 204 73 44 27 0 0 0.791 0.283 0.171 0.105 0.000 0.000 chr4 8435777 8481555
view TRMT5 195 80 57 20 0 0 0.756 0.310 0.221 0.078 0.000 0.000 chr14 60966441 60986079
view TRMT61A 218 73 35 27 0 0 0.845 0.283 0.136 0.105 0.000 0.000 chr14 103524196 103542073
view TRMT61B 179 53 70 46 0 0 0.694 0.205 0.271 0.178 0.000 0.000 chr2 28844821 28875309
view TRMT6 213 70 43 33 0 0 0.826 0.271 0.167 0.128 0.000 0.000 chr20 5932228 5955533
view TRMT9B 191 66 45 28 0 0 0.740 0.256 0.174 0.109 0.000 0.000 chr8 12940673 13034777
view TRMU 151 40 94 55 0 0 0.585 0.155 0.364 0.213 0.000 0.000 chr22 46330714 46362340
view TRNAU1AP 147 20 100 75 0 0 0.570 0.078 0.388 0.291 0.000 0.000 chr1 28548085 28583545
view TRNP1 143 27 112 75 0 0 0.554 0.105 0.434 0.291 0.000 0.000 chr1 26988692 27005886
view TRNT1 200 68 51 30 0 0 0.775 0.264 0.198 0.116 0.000 0.000 chr3 3121940 3154023
view TROAP 145 37 106 63 0 0 0.562 0.143 0.411 0.244 0.000 0.000 chr12 49318255 49336731
view TRO 93 28 160 74 0 0 0.360 0.109 0.620 0.287 0.000 0.000 chrX 54915824 54936431
view TRPA1 200 70 46 31 0 0 0.775 0.271 0.178 0.120 0.000 0.000 chr8 72016250 72080584
view TRPC1 169 61 72 35 0 0 0.655 0.236 0.279 0.136 0.000 0.000 chr3 142719034 142812888
view TRPC3 171 52 65 41 0 0 0.663 0.202 0.252 0.159 0.000 0.000 chr4 121869481 121957060
view TRPC4AP 166 47 78 48 0 0 0.643 0.182 0.302 0.186 0.000 0.000 chr20 34997404 35097807
view TRPC4 142 41 73 38 0 0 0.550 0.159 0.283 0.147 0.000 0.000 chr13 37627063 37874772
view TRPC5OS 58 8 194 93 0 0 0.225 0.031 0.752 0.360 0.000 0.000 chrX 111871181 111908990
view TRPC5 19 0 207 90 0 0 0.074 0.000 0.802 0.349 0.000 0.000 chrX 111763011 112087776
view TRPC6 125 36 88 46 0 0 0.484 0.140 0.341 0.178 0.000 0.000 chr11 101446564 101589007
view TRPC7 128 39 79 39 0 0 0.496 0.151 0.306 0.151 0.000 0.000 chr5 136207745 136370545
view TRPM1 127 19 97 67 0 0 0.492 0.074 0.376 0.260 0.000 0.000 chr15 30996065 31106725
view TRPM2 21 4 90 28 0 0 0.081 0.016 0.349 0.109 0.000 0.000 chr21 44348621 44447644
view TRPM3 107 26 79 48 0 0 0.415 0.101 0.306 0.186 0.000 0.000 chr9 70524060 71126621