Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view UBXN8 136 36 109 61 0 0 0.527 0.140 0.422 0.236 0.000 0.000 chr8 30739164 30772006
view UCHL1 211 77 44 25 0 0 0.818 0.298 0.171 0.097 0.000 0.000 chr4 41251928 41273455
view UCHL3 162 45 87 53 0 0 0.628 0.174 0.337 0.205 0.000 0.000 chr13 75544791 75611020
view UCHL5 153 53 93 44 0 0 0.593 0.205 0.360 0.171 0.000 0.000 chr1 193007254 193064360
view UCK1 211 68 44 35 0 0 0.818 0.264 0.171 0.136 0.000 0.000 chr9 131518801 131536263
view UCK2 160 47 66 40 0 0 0.620 0.182 0.256 0.155 0.000 0.000 chr1 165822614 165916618
view UCKL1 177 41 68 53 0 0 0.686 0.159 0.264 0.205 0.000 0.000 chr20 63934829 63961416
view UCMA 231 86 26 18 0 0 0.895 0.333 0.101 0.070 0.000 0.000 chr10 13216766 13239374
view UCN2 150 37 95 59 1 0 0.581 0.143 0.368 0.229 0.004 0.000 chr3 48556718 48568781
view UCN3 233 89 22 14 1 1 0.903 0.345 0.085 0.054 0.004 0.004 chr10 5359966 5379692
view UCN 160 38 96 66 0 0 0.620 0.147 0.372 0.256 0.000 0.000 chr2 27302400 27313445
view UCP1 211 81 44 24 2 0 0.818 0.314 0.171 0.093 0.008 0.000 chr4 140554431 140573961
view UCP2 209 70 45 33 2 1 0.810 0.271 0.174 0.128 0.008 0.004 chr11 73969672 73987843
view UCP3 222 79 33 25 3 1 0.860 0.306 0.128 0.097 0.012 0.004 chr11 73995277 74014085
view UEVLD 199 72 51 27 0 0 0.771 0.279 0.198 0.105 0.000 0.000 chr11 18524609 18593734
view UFC1 183 75 70 27 0 0 0.709 0.291 0.271 0.105 0.000 0.000 chr1 161148978 161163856
view UFD1 200 80 53 22 0 0 0.775 0.310 0.205 0.085 0.000 0.000 chr22 19444911 19484193
view UFL1 190 70 64 33 0 0 0.736 0.271 0.248 0.128 0.000 0.000 chr6 96516806 96560276
view UFM1 143 36 105 61 0 0 0.554 0.140 0.407 0.236 0.000 0.000 chr13 38344851 38368619
view UFSP1 202 67 50 32 0 0 0.783 0.260 0.194 0.124 0.000 0.000 chr7 100883721 100894715
view UFSP2 149 38 94 60 0 0 0.578 0.147 0.364 0.233 0.000 0.000 chr4 185394537 185430964
view UGCG 211 75 43 26 0 0 0.818 0.291 0.167 0.101 0.000 0.000 chr9 111891814 111940369
view UGDH 207 72 49 31 0 0 0.802 0.279 0.190 0.120 0.000 0.000 chr4 39493755 39532439
view UGGT1 165 55 80 40 0 0 0.640 0.213 0.310 0.155 0.000 0.000 chr2 128086200 128200677
view UGGT2 165 58 65 33 0 0 0.640 0.225 0.252 0.128 0.000 0.000 chr13 95796580 96058401
view UGP2 166 39 73 51 0 0 0.643 0.151 0.283 0.198 0.000 0.000 chr2 63836896 63896560
view UGT1A10 150 38 71 48 0 0 0.581 0.147 0.275 0.186 0.000 0.000 chr2 233631448 233778300
view UGT1A1 205 71 49 31 1 0 0.795 0.275 0.190 0.120 0.004 0.000 chr2 233755270 233778300
view UGT1A3 174 50 70 42 0 0 0.674 0.194 0.271 0.163 0.000 0.000 chr2 233724042 233778300
view UGT1A4 165 45 78 51 0 0 0.640 0.174 0.302 0.198 0.000 0.000 chr2 233713736 233778300
view UGT1A5 164 44 77 50 0 0 0.636 0.171 0.298 0.194 0.000 0.000 chr2 233707907 233778300
view UGT1A6 165 43 77 51 0 0 0.640 0.167 0.298 0.198 0.000 0.000 chr2 233687890 233778300
view UGT1A7 159 42 73 47 0 0 0.616 0.163 0.283 0.182 0.000 0.000 chr2 233676901 233778300
view UGT1A8 144 35 70 45 0 0 0.558 0.136 0.271 0.174 0.000 0.000 chr2 233612633 233778300
view UGT1A9 158 42 75 49 0 0 0.612 0.163 0.291 0.190 0.000 0.000 chr2 233666898 233778300
view UGT2A1 187 64 57 33 0 0 0.725 0.248 0.221 0.128 0.000 0.000 chr4 69583417 69658247
view UGT2A2 188 64 56 32 0 0 0.729 0.248 0.217 0.124 0.000 0.000 chr4 69583417 69644642
view UGT2A3 229 90 29 15 0 0 0.888 0.349 0.112 0.058 0.000 0.000 chr4 68923463 68956804
view UGT2B10 230 91 22 10 0 0 0.891 0.353 0.085 0.039 0.000 0.000 chr4 68810994 68837023
view UGT2B11 204 77 44 21 0 0 0.791 0.298 0.171 0.081 0.000 0.000 chr4 69194951 69219748
view UGT2B15 218 76 32 23 1 1 0.845 0.295 0.124 0.089 0.004 0.004 chr4 68641597 68675652
view UGT2B17 32 0 97 25 0 0 0.124 0.000 0.376 0.097 0.000 0.000 chr4 68532173 68581322
view UGT2B28 129 52 115 47 0 0 0.500 0.202 0.446 0.182 0.000 0.000 chr4 69275475 69300050
view UGT2B4 217 78 36 24 1 0 0.841 0.302 0.140 0.093 0.004 0.000 chr4 69475165 69500905
view UGT2B7 211 78 44 25 0 0 0.818 0.302 0.171 0.097 0.000 0.000 chr4 69091474 69117987
view UGT3A1 198 69 51 32 0 0 0.767 0.267 0.198 0.124 0.000 0.000 chr5 35946006 35996390
view UGT3A2 204 71 45 28 0 0 0.791 0.275 0.174 0.109 0.000 0.000 chr5 36030021 36071882
view UGT8 139 33 98 60 0 0 0.539 0.128 0.380 0.233 0.000 0.000 chr4 114593807 114683225
view UHMK1 205 76 46 24 0 0 0.795 0.295 0.178 0.093 0.000 0.000 chr1 162492818 162534631
view UHRF1 157 26 74 58 0 0 0.609 0.101 0.287 0.225 0.000 0.000 chr19 4904501 4967154