Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view VASN 177 45 74 55 0 0 0.686 0.174 0.287 0.213 0.000 0.000 chr16 4366848 4388538
view VASP 202 67 51 34 1 1 0.783 0.260 0.198 0.132 0.004 0.004 chr19 45502479 45531983
view VAT1L 170 50 49 30 0 0 0.659 0.194 0.190 0.116 0.000 0.000 chr16 77783564 77985107
view VAT1 171 45 79 53 1 0 0.663 0.174 0.306 0.205 0.004 0.000 chr17 43009607 43027385
view VAV1 152 35 74 46 0 0 0.589 0.136 0.287 0.178 0.000 0.000 chr19 6767708 6862361
view VAV2 99 9 74 45 0 0 0.384 0.035 0.287 0.174 0.000 0.000 chr9 133756894 133997324
view VAV3 104 23 83 46 0 0 0.403 0.089 0.322 0.178 0.000 0.000 chr1 107566161 107970180
view VAX1 227 82 29 21 0 0 0.880 0.318 0.112 0.081 0.000 0.000 chr10 117128290 117143270
view VAX2 212 78 34 20 0 0 0.822 0.302 0.132 0.078 0.000 0.000 chr2 70895576 70938446
view VBP1 60 12 191 89 0 0 0.233 0.047 0.740 0.345 0.000 0.000 chrX 155211460 155244841
view VCAM1 222 77 28 22 0 0 0.860 0.298 0.109 0.085 0.000 0.000 chr1 100714742 100744045
view VCAN 174 62 50 29 0 0 0.674 0.240 0.194 0.112 0.000 0.000 chr5 83466744 83587302
view VCL 131 33 91 52 0 0 0.508 0.128 0.353 0.202 0.000 0.000 chr10 73993116 74125169
view VCPIP1 128 25 105 62 0 0 0.496 0.097 0.407 0.240 0.000 0.000 chr8 66623487 66672231
view VCPKMT 225 83 30 19 0 0 0.872 0.322 0.116 0.074 0.000 0.000 chr14 50103637 50121572
view VCP 206 74 50 30 0 0 0.798 0.287 0.194 0.116 0.000 0.000 chr9 35051064 35077625
view VCX2 24 3 128 36 0 0 0.093 0.012 0.496 0.140 0.000 0.000 chrX 8164944 8176267
view VCX3A 16 1 80 21 0 0 0.062 0.004 0.310 0.081 0.000 0.000 chrX 6528618 6540118
view VCX3B 77 20 165 74 0 0 0.298 0.078 0.640 0.287 0.000 0.000 chrX 8459830 8471510
view VCX 110 38 138 60 1 0 0.426 0.147 0.535 0.233 0.004 0.000 chrX 7838171 7849143
view VCY1B 1 0 129 56 0 0 0.004 0.000 0.500 0.217 0.000 0.000 chrY 14051227 14061958
view VCY 0 0 124 52 0 0 0.000 0.000 0.481 0.202 0.000 0.000 chrY 13980772 13991473
view VDAC1 196 78 53 21 1 1 0.760 0.302 0.205 0.081 0.004 0.004 chr5 133966871 134009975
view VDAC2 197 74 54 27 0 0 0.764 0.287 0.209 0.105 0.000 0.000 chr10 75205796 75236448
view VDAC3 143 52 109 50 0 0 0.554 0.202 0.422 0.194 0.000 0.000 chr8 42386880 42410937
view VDR 178 46 60 44 0 0 0.690 0.178 0.233 0.171 0.000 0.000 chr12 47836537 47909994
view VEGFA 222 75 31 25 0 0 0.860 0.291 0.120 0.097 0.000 0.000 chr6 43765211 43791487
view VEGFB 163 43 78 47 2 2 0.632 0.167 0.302 0.182 0.008 0.008 chr11 64229584 64244264
view VEGFC 111 20 116 74 0 0 0.430 0.078 0.450 0.287 0.000 0.000 chr4 176678538 176797922
view VEGFD 85 21 162 76 0 0 0.329 0.081 0.628 0.295 0.000 0.000 chrX 15340596 15389413
view VENTX 213 64 40 36 0 0 0.826 0.248 0.155 0.140 0.000 0.000 chr10 133232855 133246928
view VEPH1 151 51 63 34 0 0 0.585 0.198 0.244 0.132 0.000 0.000 chr3 157254742 157508416
view VEZF1 136 29 112 67 0 0 0.527 0.112 0.434 0.260 0.000 0.000 chr17 57966552 57993254
view VEZT 212 83 35 17 0 0 0.822 0.322 0.136 0.066 0.000 0.000 chr12 95212807 95307799
view VGF 210 76 43 24 0 0 0.814 0.295 0.167 0.093 0.000 0.000 chr7 101157509 101170569
view VGLL1 63 18 191 85 0 0 0.244 0.070 0.740 0.329 0.000 0.000 chrX 136527215 136561799
view VGLL2 215 75 41 29 1 1 0.833 0.291 0.159 0.112 0.004 0.004 chr6 117260558 117278565
view VGLL3 184 75 65 27 0 0 0.713 0.291 0.252 0.105 0.000 0.000 chr3 86932973 86996149
view VGLL4 193 61 41 28 0 0 0.748 0.236 0.159 0.109 0.000 0.000 chr3 11551069 11648915
view VHLL 193 66 54 36 5 0 0.748 0.256 0.209 0.140 0.019 0.000 chr1 156293624 156304307
view VHL 203 69 48 30 0 0 0.787 0.267 0.186 0.116 0.000 0.000 chr3 10136778 10158667
view VIL1 167 50 83 48 0 0 0.647 0.194 0.322 0.186 0.000 0.000 chr2 218414123 218458295
view VILL 161 44 85 52 0 0 0.624 0.171 0.329 0.202 0.000 0.000 chr3 37985786 38012185
view VIM 203 62 53 42 0 0 0.787 0.240 0.205 0.163 0.000 0.000 chr10 17223241 17242593
view VIPAS39 121 18 125 76 0 0 0.469 0.070 0.484 0.295 0.000 0.000 chr14 77421675 77462601
view VIPR1 205 66 38 28 0 0 0.795 0.256 0.147 0.109 0.000 0.000 chr3 42497643 42542568
view VIPR2 167 51 58 38 0 0 0.647 0.198 0.225 0.147 0.000 0.000 chr7 159023175 159149867
view VIP 215 73 38 29 1 0 0.833 0.283 0.147 0.112 0.004 0.000 chr6 152745797 152764760
view VIRMA 172 51 76 47 0 0 0.667 0.198 0.295 0.182 0.000 0.000 chr8 94482689 94558469
view VIT 163 42 52 33 0 0 0.632 0.163 0.202 0.128 0.000 0.000 chr2 36691707 36819794