Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view XAGE2 61 7 193 95 1 0 0.236 0.027 0.748 0.368 0.004 0.000 chrX 52364021 52380680
view XAGE3 97 31 158 71 0 0 0.376 0.120 0.612 0.275 0.000 0.000 chrX 52857528 52873083
view XAGE5 69 16 185 87 0 0 0.267 0.062 0.717 0.337 0.000 0.000 chrX 52806287 52823301
view XBP1 203 79 48 22 0 0 0.787 0.306 0.186 0.085 0.000 0.000 chr22 28789560 28805569
view XCL1 227 88 28 15 0 0 0.880 0.341 0.109 0.058 0.000 0.000 chr1 168571605 168587069
view XCL2 220 84 38 21 0 0 0.853 0.326 0.147 0.081 0.000 0.000 chr1 168535768 168548997
view XCR1 199 73 56 29 0 0 0.771 0.283 0.217 0.112 0.000 0.000 chr3 46012007 46032483
view XDH 184 57 53 35 0 0 0.713 0.221 0.205 0.136 0.000 0.000 chr2 31329321 31419742
view XG 104 32 135 61 0 0 0.403 0.124 0.523 0.236 0.000 0.000 chrX 2747040 2821500
view XIAP 83 18 159 74 0 0 0.322 0.070 0.616 0.287 0.000 0.000 chrX 123855053 123918972
view XIRP1 200 64 50 35 0 0 0.775 0.248 0.194 0.136 0.000 0.000 chr3 39178215 39197595
view XIRP2 95 28 100 50 0 0 0.368 0.109 0.388 0.194 0.000 0.000 chr2 166883480 167264753
view XKR3 209 84 39 17 0 0 0.810 0.326 0.151 0.066 0.000 0.000 chr22 16778480 16830411
view XKR4 91 16 90 55 0 0 0.353 0.062 0.349 0.213 0.000 0.000 chr8 55097028 55547054
view XKR5 234 91 20 11 0 0 0.907 0.353 0.078 0.043 0.000 0.000 chr8 6803517 6840524
view XKR6 89 0 113 78 0 0 0.345 0.000 0.438 0.302 0.000 0.000 chr8 10891045 11206833
view XKR7 151 31 92 65 0 0 0.585 0.120 0.357 0.252 0.000 0.000 chr20 31963151 32008387
view XKR8 220 77 35 26 1 0 0.853 0.298 0.136 0.101 0.004 0.000 chr1 27954973 27973093
view XKR9 160 56 86 46 0 0 0.620 0.217 0.333 0.178 0.000 0.000 chr8 70664339 70740942
view XKRX 85 22 163 75 1 0 0.329 0.085 0.632 0.291 0.004 0.000 chrX 100908445 100933917
view XK 45 6 210 98 0 0 0.174 0.023 0.814 0.380 0.000 0.000 chrX 37680791 37737130
view XNDC1N 168 51 75 43 0 0 0.651 0.198 0.291 0.167 0.000 0.000 chr11 71875704 71933594
view XPA 206 72 46 27 0 0 0.798 0.279 0.178 0.105 0.000 0.000 chr9 97669909 97702340
view XPC 186 62 63 37 0 0 0.721 0.240 0.244 0.143 0.000 0.000 chr3 14140147 14183601
view XPNPEP1 171 59 61 29 0 0 0.663 0.229 0.236 0.112 0.000 0.000 chr10 109859766 109928511
view XPNPEP2 94 29 147 64 0 0 0.364 0.112 0.570 0.248 0.000 0.000 chrX 129733979 129774536
view XPNPEP3 123 31 115 63 0 0 0.477 0.120 0.446 0.244 0.000 0.000 chr22 40852148 40937815
view XPO1 158 48 78 38 0 0 0.612 0.186 0.302 0.147 0.000 0.000 chr2 61472849 61543356
view XPO4 145 33 93 56 0 0 0.562 0.128 0.360 0.217 0.000 0.000 chr13 20772329 20907746
view XPO5 122 28 105 59 0 0 0.473 0.109 0.407 0.229 0.000 0.000 chr6 43517334 43581038
view XPO6 153 47 82 44 0 0 0.593 0.182 0.318 0.171 0.000 0.000 chr16 28092976 28216965
view XPO7 170 55 76 40 0 0 0.659 0.213 0.295 0.155 0.000 0.000 chr8 21914662 22011585
view XPOT 190 74 58 25 0 0 0.736 0.287 0.225 0.097 0.000 0.000 chr12 64399392 64456125
view XPR1 164 53 65 36 0 0 0.636 0.205 0.252 0.140 0.000 0.000 chr1 180627022 180895279
view XRCC1 213 75 39 24 1 1 0.826 0.291 0.151 0.093 0.004 0.004 chr19 43538311 43580527
view XRCC2 196 67 54 32 0 0 0.760 0.260 0.209 0.124 0.000 0.000 chr7 152639776 152681141
view XRCC3 199 66 53 33 0 0 0.771 0.256 0.205 0.128 0.000 0.000 chr14 103692617 103720451
view XRCC4 130 44 80 37 0 0 0.504 0.171 0.310 0.143 0.000 0.000 chr5 83072547 83358760
view XRCC5 175 49 63 43 0 0 0.678 0.190 0.244 0.167 0.000 0.000 chr2 216104348 216211293
view XRCC6 161 45 77 44 0 0 0.624 0.174 0.298 0.171 0.000 0.000 chr22 41616295 41669041
view XRN1 161 50 74 41 0 0 0.624 0.194 0.287 0.159 0.000 0.000 chr3 142301610 142453037
view XRN2 138 40 102 56 0 0 0.535 0.155 0.395 0.217 0.000 0.000 chr20 21298331 21394825
view XRRA1 172 58 72 39 0 0 0.667 0.225 0.279 0.151 0.000 0.000 chr11 74835910 74954091
view XXYLT1 98 16 74 46 0 0 0.380 0.062 0.287 0.178 0.000 0.000 chr3 195063284 195276159
view XYLB 178 49 61 42 0 0 0.690 0.190 0.236 0.163 0.000 0.000 chr3 38341785 38419985
view XYLT1 77 2 93 58 0 0 0.298 0.008 0.360 0.225 0.000 0.000 chr16 17096769 17475960
view XYLT2 179 49 72 49 0 0 0.694 0.190 0.279 0.190 0.000 0.000 chr17 50341126 50366185
view YAE1 224 82 32 21 1 1 0.868 0.318 0.124 0.081 0.004 0.004 chr7 39561404 39577881
view YAF2 186 66 60 33 0 0 0.721 0.256 0.233 0.128 0.000 0.000 chr12 42152104 42243248
view YAP1 160 52 67 37 0 0 0.620 0.202 0.260 0.143 0.000 0.000 chr11 102105447 102238424