Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18942	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0041	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	A1BG	chr19	58340183	58358492
A3GALT2_chr1_33301766_33326098	NA18942	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0129	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18942	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0173	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18942	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0166	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18942	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0326	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18942	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18942	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0291	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18942	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0221	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18942	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18942	hp2	a0001	a0001c0001	a0001c0001t0031	a0001c0001t0031g0053	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18942	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0012	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18942	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18942	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0065	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18942	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0176	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18942	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0248	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18942	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0040	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18942	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	NA18942	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0011	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18942	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA18942	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0256	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18942	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0091	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18942	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0086	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18942	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0126	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA18942	hp1	a0003	a0003c0004	a0003c0004t0004	a0003c0004t0004g0030	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18942	hp2	a0007	a0007c0101	a0007c0101t0003	a0007c0101t0003g0139	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA18942	hp1	a0001	a0001c0005	a0001c0005t0010	a0001c0005t0010g0043	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18942	hp2	a0002	a0002c0011	a0002c0011t0020	a0002c0011t0020g0171	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	NA18942	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0045	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18942	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0083	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	NA18942	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0091	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA6_chr17_69073702_69146895	NA18942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18942	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0192	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18942	hp1	a0001	a0001c0050	a0001c0050t0001	a0001c0050t0001g0194	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18942	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0073	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB10_chr1_229511582_229563707	NA18942	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0264	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18942	hp2	a0001	a0001c0001	a0001c0001t0010	a0001c0001t0010g0225	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB11_chr2_168915781_169036324	NA18942	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0002	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18942	hp2	a0001	a0001c0002	a0001c0002t0015	a0001c0002t0015g0003	JPT	EAS	ABCB11	chr2	168915781	169036324