Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18989	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18989	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0044	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18989	hp1	a0037	a0037c0044	a0037c0044t0002	a0037c0044t0002g0112	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18989	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0338	JPT	EAS	A2ML1	chr12	8817621	8881787
AACS_chr12_125060435_125148316	NA18989	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0155	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18989	hp2	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0242	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18989	hp1	a0001	a0001c0001	a0001c0001t0056	a0001c0001t0056g0006	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18989	hp1	a0001	a0001c0002	a0001c0002t0009	a0001c0002t0009g0017	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18989	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0186	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18989	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18989	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18989	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0231	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18989	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0245	JPT	EAS	AAGAB	chr15	67195667	67259661
AANAT_chr17_76462603_76475117	NA18989	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18989	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0096	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18989	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18989	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18989	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0026	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18989	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18989	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18989	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0287	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18989	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0317	JPT	EAS	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	NA18989	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0241	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	JPT	EAS	AATF	chr17	36943954	37061871
ABCA10_chr17_69143007_69233824	NA18989	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0108	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18989	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0272	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA4_chr1_93987834_94126148	NA18989	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0059	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18989	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0222	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA18989	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0308	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18989	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0076	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18989	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0203	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18989	hp2	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0020	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA18989	hp1	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0281	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18989	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0204	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA18989	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0079	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18989	hp2	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0265	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB4_chr7_87396696_87480680	NA18989	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0071	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18989	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0139	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	NA18989	hp1	a0006	a0006c0019	a0006c0019t0001	a0006c0019t0001g0175	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18989	hp2	a0020	a0020c0076	a0020c0076t0001	a0020c0076t0001g0269	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	NA18989	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0199	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA18989	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	ABCB8	chr7	151023450	151052782