Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0154	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18997	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0282	JPT	EAS	A2ML1	chr12	8817621	8881787
AAAS_chr12_53302460_53326610	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18997	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0232	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0284	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18997	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0071	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18997	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18997	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0005	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18997	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18997	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18997	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0095	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18997	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0021	JPT	EAS	AAGAB	chr15	67195667	67259661
AARD_chr8_116933207_116949487	NA18997	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18997	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0177	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18997	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0077	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18997	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0028	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18997	hp2	a0012	a0012c0015	a0012c0015t0001	a0012c0015t0001g0194	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18997	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0293	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	JPT	EAS	AASS	chr7	122068549	122149249
ABCA4_chr1_93987834_94126148	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0202	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18997	hp2	a0007	a0007c0027	a0007c0027t0002	a0007c0027t0002g0042	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCB6_chr2_219204772_219223958	NA18997	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0003	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB8_chr7_151023450_151052782	NA18997	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18997	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCD2_chr12_39545033_39624803	NA18997	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0006	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA18997	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0197	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD3_chr1_94413389_94523663	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA18997	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0236	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD4_chr14_74280269_74307934	NA18997	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0055	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA18997	hp2	a0001	a0001c0020	a0001c0020t0002	a0001c0020t0002g0118	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCF1_chr6_30566442_30596522	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0201	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF2_chr7_151206484_151232205	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA18997	hp2	a0001	a0001c0003	a0001c0003t0015	a0001c0003t0015g0019	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCG4_chr11_119144052_119167653	NA18997	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0008	JPT	EAS	ABCG4	chr11	119144052	119167653
ABCG4_chr11_119144052_119167653	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCG4	chr11	119144052	119167653
ABHD11_chr7_73731094_73743802	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD11_chr7_73731094_73743802	NA18997	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD14A_chr3_51970064_51986196	NA18997	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	NA18997	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABHD14A	chr3	51970064	51986196