Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03834	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	BEB	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	BEB	SAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG03834	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0218	BEB	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03834	hp2	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0270	BEB	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG03834	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0015	BEB	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	BEB	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03834	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0039	BEB	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03834	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0150	BEB	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03834	hp1	a0006	a0006c0013	a0006c0013t0008	a0006c0013t0008g0052	BEB	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03834	hp2	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0056	BEB	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03834	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	BEB	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	BEB	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03834	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	BEB	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	BEB	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03834	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0047	BEB	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0261	BEB	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03834	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03834	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0064	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03834	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	BEB	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03834	hp2	a0001	a0001c0002	a0001c0002t0040	a0001c0002t0040g0021	BEB	SAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG03834	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	BEB	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	BEB	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03834	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	BEB	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03834	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0336	BEB	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03834	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0318	BEB	SAS	AAGAB	chr15	67195667	67259661
AANAT_chr17_76462603_76475117	HG03834	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	BEB	SAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG03834	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0100	BEB	SAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG03834	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0151	BEB	SAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG03834	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	BEB	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03834	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	BEB	SAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG03834	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0006	BEB	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03834	hp2	a0001	a0001c0011	a0001c0011t0005	a0001c0011t0005g0036	BEB	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03834	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	BEB	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03834	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	BEB	SAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG03834	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0319	BEB	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03834	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0238	BEB	SAS	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	HG03834	hp1	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0099	BEB	SAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG03834	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	BEB	SAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG03834	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0028	BEB	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03834	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0235	BEB	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03834	hp1	a0001	a0001c0003	a0001c0003t0036	a0001c0003t0036g0158	BEB	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03834	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0224	BEB	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03834	hp1	a0001	a0001c0034	a0001c0034t0002	a0001c0034t0002g0109	BEB	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03834	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0105	BEB	SAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG03834	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0123	BEB	SAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG03834	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0055	BEB	SAS	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG03834	hp1	a0004	a0004c0008	a0004c0008t0005	a0004c0008t0005g0169	BEB	SAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG03834	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0054	BEB	SAS	ABCA13	chr7	48166458	48652497