Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
AQR 155 51 73 38 0 0 0.601 0.198 0.283 0.147 0.000 0.000 chr15 34846782 34974742
ARAF 97 31 157 72 0 0 0.376 0.120 0.609 0.279 0.000 0.000 chrX 47556205 47576908
ARAP1 176 48 63 42 0 0 0.682 0.186 0.244 0.163 0.000 0.000 chr11 72680069 72757408
ARAP2 138 30 74 52 0 0 0.535 0.116 0.287 0.202 0.000 0.000 chr4 36061004 36249514
ARAP3 207 66 43 31 0 0 0.802 0.256 0.167 0.120 0.000 0.000 chr5 141648402 141687230
ARCN1 183 58 60 36 0 0 0.709 0.225 0.233 0.140 0.000 0.000 chr11 118567409 118608033
ARC 209 67 37 26 1 1 0.810 0.260 0.143 0.101 0.004 0.004 chr8 142606049 142619479
AREG 213 85 42 18 0 0 0.826 0.329 0.163 0.070 0.000 0.000 chr4 74440136 74460005
AREL1 186 65 59 33 0 0 0.721 0.252 0.229 0.128 0.000 0.000 chr14 74656256 74718080
ARF1 214 83 38 20 0 0 0.829 0.322 0.147 0.078 0.000 0.000 chr1 228077708 228104212
ARF3 173 51 77 48 0 0 0.671 0.198 0.298 0.186 0.000 0.000 chr12 48930723 48962487
ARF4 178 61 70 37 0 0 0.690 0.236 0.271 0.143 0.000 0.000 chr3 57566363 57602344
ARF5 200 68 56 36 1 0 0.775 0.264 0.217 0.140 0.004 0.000 chr7 127583411 127596700
ARF6 171 51 79 47 0 0 0.663 0.198 0.306 0.182 0.000 0.000 chr14 49888082 49902054
ARFGAP1 170 47 72 43 0 0 0.659 0.182 0.279 0.167 0.000 0.000 chr20 63267813 63294790
ARFGAP2 186 57 71 47 0 0 0.721 0.221 0.275 0.182 0.000 0.000 chr11 47159301 47181879
ARFGAP3 180 57 60 37 0 0 0.698 0.221 0.233 0.143 0.000 0.000 chr22 42791502 42862273
ARFGEF1 103 24 115 60 0 0 0.399 0.093 0.446 0.233 0.000 0.000 chr8 67192658 67348781
ARFGEF2 175 61 69 37 0 0 0.678 0.236 0.267 0.143 0.000 0.000 chr20 48916711 49041693
ARFGEF3 94 22 110 57 0 0 0.364 0.085 0.426 0.221 0.000 0.000 chr6 138156939 138349663
ARFIP1 170 61 75 38 0 0 0.659 0.236 0.291 0.147 0.000 0.000 chr4 152774954 152917357
ARFIP2 200 66 53 36 1 0 0.775 0.256 0.205 0.140 0.004 0.000 chr11 6471519 6486331
ARFRP1 147 44 80 41 0 0 0.570 0.171 0.310 0.159 0.000 0.000 chr20 63693647 63712976
ARG1 209 82 49 23 0 0 0.810 0.318 0.190 0.089 0.000 0.000 chr6 131568226 131589329
ARG2 218 75 37 28 0 0 0.845 0.291 0.143 0.109 0.000 0.000 chr14 67614920 67656708
ARGFX 204 65 48 36 0 0 0.791 0.252 0.186 0.140 0.000 0.000 chr3 121562949 121595622
ARGLU1 187 59 60 39 0 0 0.725 0.229 0.233 0.151 0.000 0.000 chr13 106536673 106573137
ARHGAP10 52 6 143 80 0 0 0.202 0.023 0.554 0.310 0.000 0.000 chr4 147727088 148077776
ARHGAP11A 167 54 81 44 0 0 0.647 0.209 0.314 0.171 0.000 0.000 chr15 32610504 32644941
ARHGAP11B 123 16 103 63 0 0 0.477 0.062 0.399 0.244 0.000 0.000 chr15 30621128 30643810
ARHGAP12 160 53 80 41 0 0 0.620 0.205 0.310 0.159 0.000 0.000 chr10 31800398 31933831
ARHGAP15 80 16 76 40 0 0 0.310 0.062 0.295 0.155 0.000 0.000 chr2 143124419 143773352
ARHGAP17 119 29 98 54 0 0 0.461 0.112 0.380 0.209 0.000 0.000 chr16 24914389 25020369
ARHGAP18 118 29 90 43 0 0 0.457 0.112 0.349 0.167 0.000 0.000 chr6 129571132 129715177
ARHGAP19 120 28 102 52 0 0 0.465 0.109 0.395 0.202 0.000 0.000 chr10 97217179 97297637
ARHGAP1 171 52 82 48 0 0 0.663 0.202 0.318 0.186 0.000 0.000 chr11 46672080 46705619
ARHGAP20 112 30 98 53 0 0 0.434 0.116 0.380 0.205 0.000 0.000 chr11 110572043 110717437
ARHGAP21 175 58 64 38 0 0 0.678 0.225 0.248 0.147 0.000 0.000 chr10 24578614 24728887
ARHGAP22 134 23 87 63 0 0 0.519 0.089 0.337 0.244 0.000 0.000 chr10 48441036 48610073
ARHGAP23 154 36 70 48 0 0 0.597 0.140 0.271 0.186 0.000 0.000 chr17 38423464 38517385
ARHGAP24 54 1 111 65 0 0 0.209 0.004 0.430 0.252 0.000 0.000 chr4 85470150 86007666
ARHGAP25 183 56 52 33 0 0 0.709 0.217 0.202 0.128 0.000 0.000 chr2 68729811 68831833
ARHGAP26 98 29 78 39 0 0 0.380 0.112 0.302 0.151 0.000 0.000 chr5 142765377 143234007
ARHGAP27 173 55 70 36 0 0 0.671 0.213 0.271 0.140 0.000 0.000 chr17 45388908 45437870
ARHGAP28 123 33 75 44 0 0 0.477 0.128 0.291 0.171 0.000 0.000 chr18 6724716 6920716
ARHGAP29 177 61 70 38 0 0 0.686 0.236 0.271 0.147 0.000 0.000 chr1 94163905 94242584
ARHGAP30 194 69 49 25 1 1 0.752 0.267 0.190 0.097 0.004 0.004 chr1 161041946 161074891
ARHGAP31 154 44 62 40 0 0 0.597 0.171 0.240 0.155 0.000 0.000 chr3 119289383 119425714
ARHGAP32 198 72 47 28 0 0 0.767 0.279 0.182 0.109 0.000 0.000 chr11 128960060 129197325
ARHGAP33 209 72 42 26 0 0 0.810 0.279 0.163 0.101 0.000 0.000 chr19 35770564 35793822