Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ARMH1 143 32 75 43 0 0 0.554 0.124 0.291 0.167 0.000 0.000 chr1 44669714 44730591
view ARMH2 221 81 36 23 0 0 0.857 0.314 0.140 0.089 0.000 0.000 chr6 24792335 24803917
view ARMH3 130 45 94 45 0 0 0.504 0.174 0.364 0.174 0.000 0.000 chr10 101840599 102061173
view ARMH4 128 32 78 45 0 0 0.496 0.124 0.302 0.174 0.000 0.000 chr14 57995761 58157213
view ARMS2 211 74 45 30 1 1 0.818 0.287 0.174 0.116 0.004 0.004 chr10 122449653 122462352
view ARMT1 208 79 47 24 0 0 0.806 0.306 0.182 0.093 0.000 0.000 chr6 151447466 151475101
view ARNT2 133 35 70 44 0 0 0.516 0.136 0.271 0.171 0.000 0.000 chr15 80399382 80602933
view ARNT 162 55 80 42 0 0 0.628 0.213 0.310 0.163 0.000 0.000 chr1 150804713 150881599
view ARPC1A 157 48 87 48 0 0 0.609 0.186 0.337 0.186 0.000 0.000 chr7 99320898 99371262
view ARPC1B 169 56 84 44 0 0 0.655 0.217 0.326 0.171 0.000 0.000 chr7 99369730 99399816
view ARPC2 165 51 81 46 0 0 0.640 0.198 0.314 0.178 0.000 0.000 chr2 218212189 218259348
view ARPC3 166 47 89 55 0 0 0.643 0.182 0.345 0.213 0.000 0.000 chr12 110429823 110455337
view ARPC4 222 83 30 17 0 0 0.860 0.322 0.116 0.066 0.000 0.000 chr3 9788082 9812101
view ARPC5L 201 69 52 31 1 1 0.779 0.267 0.202 0.120 0.004 0.004 chr9 124857130 124882733
view ARPC5 181 57 74 45 0 0 0.702 0.221 0.287 0.174 0.000 0.000 chr1 183615846 183640783
view ARPIN 206 64 45 36 0 0 0.798 0.248 0.174 0.140 0.000 0.000 chr15 89890006 89917952
view ARPP19 210 77 46 27 0 0 0.814 0.298 0.178 0.105 0.000 0.000 chr15 52542045 52574030
view ARPP21 132 34 84 45 0 0 0.512 0.132 0.326 0.174 0.000 0.000 chr3 35634525 35799486
view ARR3 94 27 160 74 1 1 0.364 0.105 0.620 0.287 0.004 0.004 chrX 70263334 70286840
view ARRB1 159 43 67 41 0 0 0.616 0.167 0.260 0.159 0.000 0.000 chr11 75255122 75356661
view ARRB2 215 74 40 29 0 0 0.833 0.287 0.155 0.112 0.000 0.000 chr17 4705632 4726497
view ARRDC1 168 44 84 59 0 0 0.651 0.171 0.326 0.229 0.000 0.000 chr9 137600686 137620360
view ARRDC2 206 66 47 34 0 0 0.798 0.256 0.182 0.132 0.000 0.000 chr19 18003170 18019102
view ARRDC3 200 74 56 30 0 0 0.775 0.287 0.217 0.116 0.000 0.000 chr5 91363631 91388317
view ARRDC4 210 77 44 25 0 0 0.814 0.298 0.171 0.097 0.000 0.000 chr15 97955703 97978833
view ARRDC5 205 64 45 36 0 0 0.795 0.248 0.174 0.140 0.000 0.000 chr19 4885437 4907896
view ARSA 229 84 27 20 1 1 0.888 0.326 0.105 0.078 0.004 0.004 chr22 50617754 50633152
view ARSB 179 55 44 30 0 0 0.694 0.213 0.171 0.116 0.000 0.000 chr5 78772209 78990310
view ARSD 112 39 139 59 0 0 0.434 0.151 0.539 0.229 0.000 0.000 chrX 2898972 2934339
view ARSF 37 6 180 76 0 0 0.143 0.023 0.698 0.295 0.000 0.000 chrX 3036471 3117727
view ARSG 151 36 62 42 0 0 0.585 0.140 0.240 0.163 0.000 0.000 chr17 68286495 68425814
view ARSH 66 15 163 75 0 0 0.256 0.058 0.632 0.291 0.000 0.000 chrX 3001546 3039111
view ARSI 227 82 28 20 1 1 0.880 0.318 0.109 0.078 0.004 0.004 chr5 150291343 150307905
view ARSJ 174 61 56 28 0 0 0.674 0.236 0.217 0.109 0.000 0.000 chr4 113895284 113984647
view ARSK 167 62 82 39 0 0 0.647 0.240 0.318 0.151 0.000 0.000 chr5 95550101 95610102
view ARSL 100 32 145 64 0 0 0.388 0.124 0.562 0.248 0.000 0.000 chrX 2929521 2969341
view ART1 196 70 52 28 0 0 0.760 0.271 0.202 0.109 0.000 0.000 chr11 3640128 3669416
view ART3 195 69 55 33 0 0 0.756 0.267 0.213 0.128 0.000 0.000 chr4 76069709 76117786
view ART4 189 54 63 46 1 0 0.733 0.209 0.244 0.178 0.004 0.000 chr12 14820569 14848526
view ART5 226 85 28 16 1 1 0.876 0.329 0.109 0.062 0.004 0.004 chr11 3633512 3646992
view ARTN 196 75 59 28 0 0 0.760 0.291 0.229 0.109 0.000 0.000 chr1 43928801 43942240
view ARV1 200 73 55 29 0 0 0.775 0.283 0.213 0.112 0.000 0.000 chr1 230974094 231005733
view ARVCF 186 58 52 36 0 0 0.721 0.225 0.202 0.140 0.000 0.000 chr22 19964896 20021823
view ARX 86 20 163 77 0 0 0.333 0.078 0.632 0.298 0.000 0.000 chrX 24998694 25020965
view AR 32 0 211 96 0 0 0.124 0.000 0.818 0.372 0.000 0.000 chrX 67539021 67735619
view AS3MT 180 63 64 33 0 0 0.698 0.244 0.248 0.128 0.000 0.000 chr10 102864470 102906899
view ASAH1 209 74 37 24 0 0 0.810 0.287 0.143 0.093 0.000 0.000 chr8 18050992 18089107
view ASAH2B 206 80 45 20 0 0 0.798 0.310 0.174 0.078 0.000 0.000 chr10 50734936 50764255
view ASAH2 203 73 46 26 0 0 0.787 0.283 0.178 0.101 0.000 0.000 chr10 50179861 50256516
view ASAP1 153 44 69 38 0 0 0.593 0.171 0.267 0.147 0.000 0.000 chr8 130047104 130448674