Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
Chr Start End
view NUDT19 202 76 52 27 0 0 0.783 0.295 0.202 0.105 0.000 0.000 chr19 32686821 32718792
view NUDT1 206 70 48 32 1 1 0.798 0.271 0.186 0.124 0.004 0.004 chr7 2237226 2256145
view NUDT21 206 79 48 24 0 0 0.798 0.306 0.186 0.093 0.000 0.000 chr16 56424133 56456332
view NUDT22 184 57 59 35 1 0 0.713 0.221 0.229 0.136 0.004 0.000 chr11 64221274 64235016
view NUDT2 217 72 35 28 0 0 0.841 0.279 0.136 0.109 0.000 0.000 chr9 34324569 34348699
view NUDT3 134 41 92 50 0 0 0.519 0.159 0.357 0.194 0.000 0.000 chr6 34274679 34397669
view NUDT4B 50 36 11 10 196 58 0.194 0.140 0.043 0.039 0.760 0.225 chr1 148743774 148757415
view NUDT4 206 69 45 32 0 0 0.798 0.267 0.174 0.124 0.000 0.000 chr12 93372925 93413146
view NUDT5 196 72 50 27 0 0 0.760 0.279 0.194 0.105 0.000 0.000 chr10 12160330 12200891
view NUDT6 183 60 69 43 1 1 0.709 0.233 0.267 0.167 0.004 0.004 chr4 122887577 122927597
view NUDT7 230 84 24 18 0 0 0.891 0.326 0.093 0.070 0.000 0.000 chr16 77717514 77747260
view NUDT8 187 55 64 43 0 0 0.725 0.213 0.248 0.167 0.000 0.000 chr11 67622938 67634937
view NUDT9 200 75 48 23 0 0 0.775 0.291 0.186 0.089 0.000 0.000 chr4 87417573 87464455
view NUF2 199 63 45 32 0 0 0.771 0.244 0.174 0.124 0.000 0.000 chr1 163316954 163360759
view NUFIP1 157 51 88 47 0 0 0.609 0.198 0.341 0.182 0.000 0.000 chr13 44934249 44994471
view NUFIP2 177 54 72 44 0 0 0.686 0.209 0.279 0.171 0.000 0.000 chr17 29250839 29299148
view NUGGC 202 71 43 26 0 0 0.783 0.275 0.167 0.101 0.000 0.000 chr8 28016964 28088936
view NUMA1 121 30 117 63 0 0 0.469 0.116 0.453 0.244 0.000 0.000 chr11 71997864 72085542
view NUMBL 206 77 45 25 0 0 0.798 0.298 0.174 0.097 0.000 0.000 chr19 40660905 40695651
view NUMB 160 40 76 51 0 0 0.620 0.155 0.295 0.198 0.000 0.000 chr14 73270216 73463546
view NUP107 198 81 49 17 0 0 0.767 0.314 0.190 0.066 0.000 0.000 chr12 68681978 68750809
view NUP133 137 32 85 55 0 0 0.531 0.124 0.329 0.213 0.000 0.000 chr1 229435259 229513341
view NUP153 157 51 86 47 0 0 0.609 0.198 0.333 0.182 0.000 0.000 chr6 17610037 17711925
view NUP155 149 43 84 46 0 0 0.578 0.167 0.326 0.178 0.000 0.000 chr5 37283137 37376106
view NUP160 168 55 79 45 0 0 0.651 0.213 0.306 0.174 0.000 0.000 chr11 47773118 47853350
view NUP188 147 41 84 45 0 0 0.570 0.159 0.326 0.174 0.000 0.000 chr9 128942699 129012096
view NUP205 175 57 67 38 0 0 0.678 0.221 0.260 0.147 0.000 0.000 chr7 135552917 135653753
view NUP210L 144 41 93 50 0 0 0.558 0.159 0.360 0.194 0.000 0.000 chr1 153987690 154160073
view NUP210 162 53 69 38 0 0 0.628 0.205 0.267 0.147 0.000 0.000 chr3 13311235 13425322
view NUP214 116 28 95 54 0 0 0.450 0.109 0.368 0.209 0.000 0.000 chr9 131120586 131239663
view NUP35 200 73 47 25 0 0 0.775 0.283 0.182 0.097 0.000 0.000 chr2 183119443 183166680
view NUP37 198 71 54 31 0 0 0.767 0.275 0.209 0.120 0.000 0.000 chr12 102068103 102125114
view NUP42 181 61 72 42 0 0 0.702 0.236 0.279 0.163 0.000 0.000 chr7 23177048 23206006
view NUP43 163 50 84 48 0 0 0.632 0.194 0.326 0.186 0.000 0.000 chr6 149719315 149751529
view NUP50 215 80 35 19 0 0 0.833 0.310 0.136 0.074 0.000 0.000 chr22 45158925 45193017
view NUP54 184 65 68 36 0 0 0.713 0.252 0.264 0.140 0.000 0.000 chr4 76109664 76153397
view NUP58 174 63 73 35 0 0 0.674 0.244 0.283 0.136 0.000 0.000 chr13 25296625 25347421
view NUP62CL 76 28 172 72 0 0 0.295 0.109 0.667 0.279 0.000 0.000 chrX 107118427 107211433
view NUP62 207 69 38 26 0 0 0.802 0.267 0.147 0.101 0.000 0.000 chr19 49901825 49934504
view NUP85 137 19 105 72 0 0 0.531 0.074 0.407 0.279 0.000 0.000 chr17 75200679 75240758
view NUP88 184 57 66 43 0 0 0.713 0.221 0.256 0.167 0.000 0.000 chr17 5379833 5424662
view NUP93 188 61 62 38 0 0 0.729 0.236 0.240 0.147 0.000 0.000 chr16 56725129 56855286
view NUP98 170 58 53 29 0 0 0.659 0.225 0.205 0.112 0.000 0.000 chr11 3670019 3802554
view NUPR1 183 62 64 38 0 0 0.709 0.240 0.248 0.147 0.000 0.000 chr16 28527708 28543974
view NUPR2 223 82 34 22 1 1 0.864 0.318 0.132 0.085 0.004 0.004 chr7 56109681 56121417
view NUS1 214 80 38 24 0 0 0.829 0.310 0.147 0.093 0.000 0.000 chr6 117670469 117715727
view NUSAP1 145 36 96 56 0 0 0.562 0.140 0.372 0.217 0.000 0.000 chr15 41327881 41386046
view NUTF2 123 25 117 65 0 0 0.477 0.097 0.453 0.252 0.000 0.000 chr16 67841933 67877567
view NUTM1 226 81 26 21 0 0 0.876 0.314 0.101 0.081 0.000 0.000 chr15 34338315 34362735
view NUTM2A 201 66 49 33 1 0 0.779 0.256 0.190 0.128 0.004 0.000 chr10 87220448 87239978