Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RACK1 214 79 38 21 1 1 0.829 0.306 0.147 0.081 0.004 0.004 chr5 181231897 181248906
view RAD17 179 65 68 36 0 0 0.694 0.252 0.264 0.140 0.000 0.000 chr5 69364818 69419801
view RAD18 173 63 70 36 0 0 0.671 0.244 0.271 0.140 0.000 0.000 chr3 8872075 8968472
view RAD1 215 74 40 28 0 0 0.833 0.287 0.155 0.109 0.000 0.000 chr5 34900260 34920504
view RAD21L1 181 53 69 45 0 0 0.702 0.205 0.267 0.174 0.000 0.000 chr20 1221044 1260876
view RAD21 213 74 42 28 0 0 0.826 0.287 0.163 0.109 0.000 0.000 chr8 116840934 116879776
view RAD23A 181 53 73 48 1 1 0.702 0.205 0.283 0.186 0.004 0.004 chr19 12940862 12958642
view RAD23B 172 47 70 46 0 0 0.667 0.182 0.271 0.178 0.000 0.000 chr9 107278279 107337189
view RAD50 137 46 94 47 0 0 0.531 0.178 0.364 0.182 0.000 0.000 chr5 132551977 132651349
view RAD51AP1 145 32 100 62 0 0 0.562 0.124 0.388 0.240 0.000 0.000 chr12 4533890 4565047
view RAD51AP2 179 60 77 44 1 0 0.694 0.233 0.298 0.171 0.004 0.000 chr2 17505579 17523440
view RAD51B 42 2 145 81 0 0 0.163 0.008 0.562 0.314 0.000 0.000 chr14 67814779 68483093
view RAD51C 164 48 75 43 0 0 0.636 0.186 0.291 0.167 0.000 0.000 chr17 58687602 58740611
view RAD51D 207 74 43 24 0 0 0.802 0.287 0.167 0.093 0.000 0.000 chr17 35087221 35124860
view RAD51 195 64 57 36 0 0 0.756 0.248 0.221 0.140 0.000 0.000 chr15 40690174 40737340
view RAD52 199 66 51 33 0 0 0.771 0.256 0.198 0.128 0.000 0.000 chr12 906736 954694
view RAD54B 180 64 67 38 0 0 0.698 0.248 0.260 0.147 0.000 0.000 chr8 94366960 94480115
view RAD54L2 137 51 92 46 0 0 0.531 0.198 0.357 0.178 0.000 0.000 chr3 51533719 51673660
view RAD54L 165 47 81 47 0 0 0.640 0.182 0.314 0.182 0.000 0.000 chr1 46242763 46283473
view RAD9A 178 51 77 51 0 0 0.690 0.198 0.298 0.198 0.000 0.000 chr11 67386986 67403410
view RAD9B 141 38 94 55 0 0 0.547 0.147 0.364 0.213 0.000 0.000 chr12 110497331 110538556
view RADIL 145 32 76 49 0 0 0.562 0.124 0.295 0.190 0.000 0.000 chr7 4792055 4888716
view RADX 37 3 203 93 0 0 0.143 0.012 0.787 0.360 0.000 0.000 chrX 106606978 106684439
view RAE1 170 47 70 43 0 0 0.659 0.182 0.271 0.167 0.000 0.000 chr20 57346255 57384202
view RAET1E 206 70 52 35 0 0 0.798 0.271 0.202 0.136 0.000 0.000 chr6 149878179 149903113
view RAET1G 227 83 25 17 1 1 0.880 0.322 0.097 0.066 0.004 0.004 chr6 149911878 149928121
view RAET1L 233 87 23 16 0 0 0.903 0.337 0.089 0.062 0.000 0.000 chr6 150013334 150030532
view RAF1 130 21 108 71 0 0 0.504 0.081 0.419 0.275 0.000 0.000 chr3 12578601 12669117
view RAG1 194 61 61 41 0 0 0.752 0.236 0.236 0.159 0.000 0.000 chr11 36563007 36584762
view RAG2 209 75 47 30 1 0 0.810 0.291 0.182 0.116 0.004 0.000 chr11 36586943 36603236
view RAI14 126 28 71 49 0 0 0.488 0.109 0.275 0.190 0.000 0.000 chr5 34651328 34837612
view RAI1 125 19 89 57 0 0 0.484 0.074 0.345 0.221 0.000 0.000 chr17 17676458 17816453
view RAI2 25 0 212 94 0 0 0.097 0.000 0.822 0.364 0.000 0.000 chrX 17795049 17866298
view RALA 182 64 62 36 0 0 0.705 0.248 0.240 0.140 0.000 0.000 chr7 39618572 39713120
view RALBP1 180 59 59 36 0 0 0.698 0.229 0.229 0.140 0.000 0.000 chr18 9470513 9543114
view RALB 178 59 68 40 0 0 0.690 0.229 0.264 0.155 0.000 0.000 chr2 120247852 120299710
view RALGAPA1 135 44 84 46 0 0 0.523 0.171 0.326 0.178 0.000 0.000 chr14 35533356 35814295
view RALGAPA2 60 16 128 64 0 0 0.233 0.062 0.496 0.248 0.000 0.000 chr20 20384530 20717644
view RALGAPB 107 26 125 67 0 0 0.415 0.101 0.484 0.260 0.000 0.000 chr20 38467843 38583858
view RALGDS 211 65 39 32 0 0 0.818 0.252 0.151 0.124 0.000 0.000 chr9 133092722 133126240
view RALGPS1 137 36 85 48 0 0 0.531 0.140 0.329 0.186 0.000 0.000 chr9 126909782 127228166
view RALGPS2 152 53 79 39 0 0 0.589 0.205 0.306 0.151 0.000 0.000 chr1 178720244 178926840
view RALYL 41 3 113 59 0 0 0.159 0.012 0.438 0.229 0.000 0.000 chr8 84178274 84926844
view RALY 144 44 96 55 0 0 0.558 0.171 0.372 0.213 0.000 0.000 chr20 33988911 34089884
view RAMACL 220 81 31 19 2 0 0.853 0.314 0.120 0.074 0.008 0.000 chr6 166578009 166591678
view RAMAC 218 75 36 28 1 0 0.845 0.291 0.140 0.109 0.004 0.000 chr15 82981210 82996057
view RAMP1 201 61 43 33 0 0 0.779 0.236 0.167 0.128 0.000 0.000 chr2 237854623 237917106
view RAMP2 176 43 78 58 0 0 0.682 0.167 0.302 0.225 0.000 0.000 chr17 42756227 42768041
view RAMP3 209 74 40 24 0 0 0.810 0.287 0.155 0.093 0.000 0.000 chr7 45152791 45189250
view RANBP10 75 7 155 83 0 0 0.291 0.027 0.601 0.322 0.000 0.000 chr16 67718070 67811560