Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RAB3A 184 48 67 50 0 0 0.713 0.186 0.260 0.194 0.000 0.000 chr19 18191784 18209042
view RAB3B 30 1 86 25 0 0 0.116 0.004 0.333 0.097 0.000 0.000 chr1 51902956 51995700
view RAB3C 109 25 84 47 0 0 0.422 0.097 0.326 0.182 0.000 0.000 chr5 58578075 58864394
view RAB3D 206 74 46 27 0 0 0.798 0.287 0.178 0.105 0.000 0.000 chr19 11317068 11344657
view RAB3GAP1 139 44 98 52 0 0 0.539 0.171 0.380 0.202 0.000 0.000 chr2 135047292 135175710
view RAB3GAP2 188 70 54 25 0 0 0.729 0.271 0.209 0.097 0.000 0.000 chr1 220143293 220277453
view RAB3IL1 195 59 61 44 0 0 0.756 0.229 0.236 0.171 0.000 0.000 chr11 61892301 61922566
view RAB3IP 200 76 51 23 0 0 0.775 0.295 0.198 0.089 0.000 0.000 chr12 69733860 69828199
view RAB40AL 94 32 160 70 0 0 0.364 0.124 0.620 0.271 0.000 0.000 chrX 102932272 102943300
view RAB40A 68 15 183 84 0 0 0.264 0.058 0.709 0.326 0.000 0.000 chrX 103494130 103524489
view RAB40B 168 45 63 37 0 0 0.651 0.174 0.244 0.143 0.000 0.000 chr17 82649973 82703698
view RAB40C 174 47 61 41 0 0 0.674 0.182 0.236 0.159 0.000 0.000 chr16 585066 634268
view RAB41 91 26 164 76 0 0 0.353 0.101 0.636 0.295 0.000 0.000 chrX 70277172 70290002
view RAB42 189 51 60 47 2 0 0.733 0.198 0.233 0.182 0.008 0.000 chr1 28587265 28600449
view RAB43 151 41 80 45 0 0 0.585 0.159 0.310 0.174 0.000 0.000 chr3 129082572 129126804
view RAB44 213 73 41 28 0 0 0.826 0.283 0.159 0.109 0.000 0.000 chr6 36692826 36738184
view RAB4A 199 70 54 33 0 0 0.771 0.271 0.209 0.128 0.000 0.000 chr1 229266111 229310894
view RAB4B 191 65 61 35 0 0 0.740 0.252 0.236 0.136 0.000 0.000 chr19 40773247 40801942
view RAB5A 173 50 74 48 0 0 0.671 0.194 0.287 0.186 0.000 0.000 chr3 19942097 19990175
view RAB5B 190 65 57 34 0 0 0.736 0.252 0.221 0.132 0.000 0.000 chr12 55969078 56001683
view RAB5C 152 38 89 56 0 0 0.589 0.147 0.345 0.217 0.000 0.000 chr17 42119979 42159989
view RAB5IF 198 67 57 36 0 0 0.767 0.260 0.221 0.140 0.000 0.000 chr20 36600779 36617557
view RAB6A 176 61 68 34 0 0 0.682 0.236 0.264 0.132 0.000 0.000 chr11 73670638 73766074
view RAB6B 192 61 40 23 0 0 0.744 0.236 0.155 0.089 0.000 0.000 chr3 133819235 133900882
view RAB6C 200 70 54 32 0 0 0.775 0.271 0.209 0.124 0.000 0.000 chr2 129974666 129987738
view RAB6D 209 71 44 30 1 0 0.810 0.275 0.171 0.116 0.004 0.000 chr2 131355492 131369168
view RAB7A 156 34 82 56 0 0 0.605 0.132 0.318 0.217 0.000 0.000 chr3 128721183 128819798
view RAB7B 164 31 78 59 0 0 0.636 0.120 0.302 0.229 0.000 0.000 chr1 205971740 206008395
view RAB8A 194 64 56 34 0 0 0.752 0.248 0.217 0.132 0.000 0.000 chr19 16106889 16139234
view RAB8B 185 63 62 37 0 0 0.717 0.244 0.240 0.143 0.000 0.000 chr15 63184606 63272776
view RAB9A 103 36 148 62 1 1 0.399 0.140 0.574 0.240 0.004 0.004 chrX 13684128 13715504
view RAB9B 100 35 156 69 2 1 0.388 0.136 0.605 0.267 0.008 0.004 chrX 103817327 103837257
view RABAC1 183 59 66 40 0 0 0.709 0.229 0.256 0.155 0.000 0.000 chr19 41951683 41964321
view RABEP1 175 54 68 41 0 0 0.678 0.209 0.264 0.159 0.000 0.000 chr17 5277284 5391340
view RABEP2 182 63 63 32 0 0 0.705 0.244 0.244 0.124 0.000 0.000 chr16 28899421 28930238
view RABEPK 193 64 59 36 0 0 0.748 0.248 0.229 0.140 0.000 0.000 chr9 125195542 125239161
view RABGAP1L 136 43 87 44 0 0 0.527 0.167 0.337 0.171 0.000 0.000 chr1 174154520 175000308
view RABGAP1 128 38 105 57 0 0 0.496 0.147 0.407 0.221 0.000 0.000 chr9 122936020 123109866
view RABGEF1 199 70 52 31 0 0 0.771 0.271 0.202 0.120 0.000 0.000 chr7 66735733 66816464
view RABGGTA 206 70 48 32 1 1 0.798 0.271 0.186 0.124 0.004 0.004 chr14 24260538 24276597
view RABGGTB 201 68 57 37 0 0 0.779 0.264 0.221 0.143 0.000 0.000 chr1 75781256 75800086
view RABIF 212 79 44 24 0 0 0.822 0.306 0.171 0.093 0.000 0.000 chr1 202873282 202894149
view RABL2A 217 77 34 22 0 0 0.841 0.298 0.132 0.085 0.000 0.000 chr2 113622266 113648392
view RABL2B 237 92 19 11 0 0 0.919 0.357 0.074 0.043 0.000 0.000 chr22 50762506 50788636
view RABL3 176 58 66 37 0 0 0.682 0.225 0.256 0.143 0.000 0.000 chr3 120679938 120747516
view RABL6 164 50 69 39 0 0 0.636 0.194 0.267 0.151 0.000 0.000 chr9 136802948 136846187
view RAC1 195 61 46 31 1 1 0.756 0.236 0.178 0.120 0.004 0.004 chr7 6369527 6408967
view RAC2 223 82 33 21 0 0 0.864 0.318 0.128 0.081 0.000 0.000 chr22 37220270 37249269
view RAC3 201 63 43 31 2 1 0.779 0.244 0.167 0.120 0.008 0.004 chr17 82026678 82039204
view RACGAP1 161 51 69 37 0 0 0.624 0.198 0.267 0.143 0.000 0.000 chr12 49984162 50030494