Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PTPN9 162 60 70 32 0 0 0.628 0.233 0.271 0.124 0.000 0.000 chr15 75458251 75584315
view PTPRA 177 61 62 36 0 0 0.686 0.236 0.240 0.140 0.000 0.000 chr20 2868481 3043669
view PTPRB 149 48 70 39 0 0 0.578 0.186 0.271 0.151 0.000 0.000 chr12 70510870 70642429
view PTPRCAP 188 61 66 41 1 0 0.729 0.236 0.256 0.159 0.004 0.000 chr11 67430510 67442682
view PTPRC 147 42 78 45 0 0 0.570 0.163 0.302 0.174 0.000 0.000 chr1 198634040 198762476
view PTPRD 17 0 89 36 0 0 0.066 0.000 0.345 0.140 0.000 0.000 chr9 8309246 10618002
view PTPRE 151 34 52 36 0 0 0.585 0.132 0.202 0.140 0.000 0.000 chr10 127902103 128090855
view PTPRF 9 1 132 45 0 0 0.035 0.004 0.512 0.174 0.000 0.000 chr1 43525883 43628666
view PTPRG 47 2 100 54 0 0 0.182 0.008 0.388 0.209 0.000 0.000 chr3 61556571 62302609
view PTPRH 188 46 57 46 0 0 0.729 0.178 0.221 0.178 0.000 0.000 chr19 55176247 55214501
view PTPRJ 107 21 100 52 0 0 0.415 0.081 0.388 0.202 0.000 0.000 chr11 47975559 48175839
view PTPRK 26 2 136 75 0 0 0.101 0.008 0.527 0.291 0.000 0.000 chr6 127963785 128525599
view PTPRM 40 1 109 66 0 0 0.155 0.004 0.422 0.256 0.000 0.000 chr18 7562316 8411856
view PTPRN2 0 0 27 4 0 0 0.000 0.000 0.105 0.016 0.000 0.000 chr7 157534056 158592823
view PTPRN 206 71 46 29 0 0 0.798 0.275 0.178 0.112 0.000 0.000 chr2 219284623 219314401
view PTPRO 81 18 110 58 0 0 0.314 0.070 0.426 0.225 0.000 0.000 chr12 15317508 15603331
view PTPRQ 88 16 94 56 0 0 0.341 0.062 0.364 0.217 0.000 0.000 chr12 80439235 80685273
view PTPRR 101 22 77 43 0 0 0.391 0.085 0.298 0.167 0.000 0.000 chr12 70633079 70925738
view PTPRS 137 19 67 51 0 0 0.531 0.074 0.260 0.198 0.000 0.000 chr19 5200508 5345812
view PTPRT 31 0 98 46 0 0 0.120 0.000 0.380 0.178 0.000 0.000 chr20 42067756 43194906
view PTPRU 147 35 70 47 0 0 0.570 0.136 0.271 0.182 0.000 0.000 chr1 29231522 29331800
view PTPRZ1 155 52 76 42 0 0 0.601 0.202 0.295 0.163 0.000 0.000 chr7 121868161 122067036
view PTRH1 173 44 77 54 0 0 0.671 0.171 0.298 0.209 0.000 0.000 chr9 127708807 127720663
view PTRH2 184 55 67 45 1 1 0.713 0.213 0.260 0.174 0.004 0.004 chr17 59692308 59712430
view PTRHD1 203 69 53 34 0 0 0.787 0.267 0.205 0.132 0.000 0.000 chr2 24784728 24798391
view PTS 201 65 53 36 0 0 0.779 0.252 0.205 0.140 0.000 0.000 chr11 112221428 112238973
view PTTG1IP2 191 59 55 38 0 0 0.740 0.229 0.213 0.147 0.000 0.000 chr7 90464639 90518397
view PTTG1IP 221 75 31 25 1 0 0.857 0.291 0.120 0.097 0.004 0.000 chr21 44844598 44878690
view PTTG1 233 91 24 13 0 0 0.903 0.353 0.093 0.050 0.000 0.000 chr5 160416855 160433739
view PTTG2 218 77 36 24 0 0 0.845 0.298 0.140 0.093 0.000 0.000 chr4 37955398 37966128
view PTX3 235 87 20 15 1 1 0.911 0.337 0.078 0.058 0.004 0.004 chr3 157431850 157448633
view PTX4 220 78 36 25 1 1 0.853 0.302 0.140 0.097 0.004 0.004 chr16 1480886 1493944
view PUDP 68 27 173 71 0 0 0.264 0.105 0.671 0.275 0.000 0.000 chrX 7043920 7153153
view PUF60 198 64 53 35 0 0 0.767 0.248 0.205 0.136 0.000 0.000 chr8 143811344 143834315
view PUM1 166 49 67 38 0 0 0.643 0.190 0.260 0.147 0.000 0.000 chr1 30926506 31070717
view PUM2 178 54 65 39 0 0 0.690 0.209 0.252 0.151 0.000 0.000 chr2 20243737 20355844
view PUM3 209 80 37 19 0 0 0.810 0.310 0.143 0.074 0.000 0.000 chr9 2799152 2849095
view PURA 94 15 148 83 0 0 0.364 0.058 0.574 0.322 0.000 0.000 chr5 140109109 140130619
view PURB 205 71 45 26 0 0 0.795 0.275 0.174 0.101 0.000 0.000 chr7 44871299 44890530
view PURG 200 69 56 35 0 0 0.775 0.267 0.217 0.136 0.000 0.000 chr8 31025850 31038356
view PUS10 122 22 115 72 0 0 0.473 0.085 0.446 0.279 0.000 0.000 chr2 60935223 61023255
view PUS1 190 54 60 44 0 0 0.736 0.209 0.233 0.171 0.000 0.000 chr12 131924276 131950896
view PUS3 224 85 30 17 0 0 0.868 0.329 0.116 0.066 0.000 0.000 chr11 125888485 125908206
view PUS7L 152 36 80 51 0 0 0.589 0.140 0.310 0.198 0.000 0.000 chr12 43713992 43763790
view PUS7 174 49 51 34 0 0 0.674 0.190 0.198 0.132 0.000 0.000 chr7 105451503 105527271
view PUSL1 175 49 75 48 0 0 0.678 0.190 0.291 0.186 0.000 0.000 chr1 1303597 1316677
view PVALB 210 74 43 26 0 0 0.814 0.287 0.167 0.101 0.000 0.000 chr22 36795703 36822035
view PVALEF 203 67 50 33 0 0 0.787 0.260 0.194 0.128 0.000 0.000 chr17 81160507 81188166
view PVRIG 196 61 57 40 0 0 0.760 0.236 0.221 0.155 0.000 0.000 chr7 100214949 100226490
view PVR 205 71 43 27 0 0 0.795 0.275 0.167 0.105 0.000 0.000 chr19 44638910 44671162