Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PSMD3 208 74 44 28 0 0 0.806 0.287 0.171 0.109 0.000 0.000 chr17 39975807 40002959
view PSMD4 209 78 44 24 1 0 0.810 0.302 0.171 0.093 0.004 0.000 chr1 151249734 151272479
view PSMD5 177 68 70 28 0 0 0.686 0.264 0.271 0.109 0.000 0.000 chr9 120811053 120847922
view PSMD6 212 74 44 29 0 0 0.822 0.287 0.171 0.112 0.000 0.000 chr3 64005551 64028494
view PSMD7 223 80 35 25 0 0 0.864 0.310 0.136 0.097 0.000 0.000 chr16 74291814 74311288
view PSMD8 211 75 43 27 0 0 0.818 0.291 0.167 0.105 0.000 0.000 chr19 38369571 38388824
view PSMD9 198 72 47 26 0 0 0.767 0.279 0.182 0.101 0.000 0.000 chr12 121883790 121923297
view PSME1 208 69 47 33 0 0 0.806 0.267 0.182 0.128 0.000 0.000 chr14 24131194 24143962
view PSME2 209 67 44 33 0 0 0.810 0.260 0.171 0.128 0.000 0.000 chr14 24138365 24151610
view PSME3IP1 181 63 66 36 0 0 0.702 0.244 0.256 0.140 0.000 0.000 chr16 57147466 57191039
view PSME3 131 16 121 83 0 0 0.508 0.062 0.469 0.322 0.000 0.000 chr17 42828397 42848760
view PSME4 191 66 54 34 0 0 0.740 0.256 0.209 0.132 0.000 0.000 chr2 53859069 53975993
view PSMF1 163 42 72 47 0 0 0.632 0.163 0.279 0.182 0.000 0.000 chr20 1113602 1177246
view PSMG1 195 70 59 33 0 0 0.756 0.271 0.229 0.128 0.000 0.000 chr21 39169769 39188451
view PSMG2 200 69 51 30 0 0 0.775 0.267 0.198 0.116 0.000 0.000 chr18 12698042 12730740
view PSMG3 183 48 66 49 1 0 0.709 0.186 0.256 0.190 0.004 0.000 chr7 1562332 1575032
view PSMG4 205 71 48 29 0 0 0.795 0.275 0.186 0.112 0.000 0.000 chr6 3253947 3273049
view PSORS1C1 224 82 28 18 0 0 0.868 0.318 0.109 0.070 0.000 0.000 chr6 31109800 31145092
view PSORS1C2 230 84 27 20 1 1 0.891 0.326 0.105 0.078 0.004 0.004 chr6 31132534 31144066
view PSPC1 128 20 104 68 0 0 0.496 0.078 0.403 0.264 0.000 0.000 chr13 19697500 19787945
view PSPH 195 64 52 35 0 0 0.756 0.248 0.202 0.136 0.000 0.000 chr7 56006064 56056444
view PSPN 189 61 64 39 0 0 0.733 0.236 0.248 0.151 0.000 0.000 chr19 6370148 6380933
view PSRC1 218 74 39 30 0 0 0.845 0.287 0.151 0.116 0.000 0.000 chr1 109274556 109288145
view PSTK 207 75 47 27 1 1 0.802 0.291 0.182 0.105 0.004 0.004 chr10 122975401 122995390
view PSTPIP1 0 0 36 6 0 0 0.000 0.000 0.140 0.023 0.000 0.000 chr15 76990126 77042475
view PSTPIP2 157 51 81 47 0 0 0.609 0.198 0.314 0.182 0.000 0.000 chr18 45978536 46077260
view PTAFR 152 36 87 53 0 0 0.589 0.140 0.337 0.205 0.000 0.000 chr1 28142166 28181690
view PTAR1 193 71 57 29 0 0 0.748 0.275 0.221 0.112 0.000 0.000 chr9 69704525 69765011
view PTBP1 193 55 54 39 0 0 0.748 0.213 0.209 0.151 0.000 0.000 chr19 792452 817312
view PTBP2 181 68 66 32 0 0 0.702 0.264 0.256 0.124 0.000 0.000 chr1 96716784 96820049
view PTBP3 170 61 69 35 0 0 0.659 0.236 0.267 0.136 0.000 0.000 chr9 112213435 112338619
view PTCD1 189 66 59 29 1 1 0.733 0.256 0.229 0.112 0.004 0.004 chr7 99411739 99443798
view PTCD2 163 51 83 45 0 0 0.632 0.198 0.322 0.174 0.000 0.000 chr5 72315373 72373395
view PTCD3 198 73 54 27 0 0 0.767 0.283 0.209 0.105 0.000 0.000 chr2 86101235 86147157
view PTCH1 141 42 98 51 0 0 0.547 0.163 0.380 0.198 0.000 0.000 chr9 95437980 95514266
view PTCH1 138 43 94 50 0 0 0.535 0.167 0.364 0.194 0.000 0.000 chr9 95437980 95521971
view PTCH2 184 61 64 37 0 0 0.713 0.236 0.248 0.143 0.000 0.000 chr1 44816938 44848253
view PTCHD1 86 28 161 72 0 0 0.333 0.109 0.624 0.279 0.000 0.000 chrX 23329849 23409374
view PTCHD4 90 13 106 68 0 0 0.349 0.050 0.411 0.264 0.000 0.000 chr6 47851673 48116197
view PTCRA 205 71 51 32 0 0 0.795 0.275 0.198 0.124 0.000 0.000 chr6 42911053 42930838
view PTDSS1 130 29 97 60 0 0 0.504 0.112 0.376 0.233 0.000 0.000 chr8 96256902 96341995
view PTDSS2 172 40 59 44 0 0 0.667 0.155 0.229 0.171 0.000 0.000 chr11 445279 496399
view PTEN 160 58 70 34 0 0 0.620 0.225 0.271 0.132 0.000 0.000 chr10 87858625 87976930
view PTER 188 72 56 26 0 0 0.729 0.279 0.217 0.101 0.000 0.000 chr10 16432010 16518745
view PTF1A 204 70 47 30 1 0 0.791 0.271 0.182 0.116 0.004 0.000 chr10 23187312 23199245
view PTGDR2 202 66 54 38 0 0 0.783 0.256 0.209 0.147 0.000 0.000 chr11 60845933 60860950
view PTGDR 218 75 39 29 0 0 0.845 0.291 0.151 0.112 0.000 0.000 chr14 52262698 52281724
view PTGDS 190 57 60 41 0 0 0.736 0.221 0.233 0.159 0.000 0.000 chr9 136972504 136986742
view PTGER1 203 66 52 36 0 0 0.787 0.256 0.202 0.140 0.000 0.000 chr19 14467466 14480354
view PTGER2 208 76 47 27 1 1 0.806 0.295 0.182 0.105 0.004 0.004 chr14 52309312 52333598