Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PTGER3 185 67 59 34 0 0 0.717 0.260 0.229 0.132 0.000 0.000 chr1 70965782 71052816
view PTGER4 202 68 53 34 0 0 0.783 0.264 0.205 0.132 0.000 0.000 chr5 40674915 40698735
view PTGES2 182 58 68 42 0 0 0.705 0.225 0.264 0.163 0.000 0.000 chr9 128115693 128132729
view PTGES3L 167 41 79 53 0 0 0.647 0.159 0.306 0.205 0.000 0.000 chr17 42963103 42985080
view PTGES3 185 60 66 40 0 0 0.717 0.233 0.256 0.155 0.000 0.000 chr12 56658349 56693284
view PTGES 212 75 37 23 1 1 0.822 0.291 0.143 0.089 0.004 0.004 chr9 129733349 129758042
view PTGFRN 156 46 71 37 0 0 0.605 0.178 0.275 0.143 0.000 0.000 chr1 116904916 116995353
view PTGFR 192 64 50 33 0 0 0.744 0.248 0.194 0.128 0.000 0.000 chr1 78485974 78545701
view PTGIR 209 72 45 30 0 0 0.810 0.279 0.174 0.116 0.000 0.000 chr19 46615468 46630089
view PTGIS 157 43 63 35 0 0 0.609 0.167 0.244 0.136 0.000 0.000 chr20 49498874 49573137
view PTGR1 203 72 44 27 0 0 0.787 0.279 0.171 0.105 0.000 0.000 chr9 111557567 111604647
view PTGR2 209 70 39 29 0 0 0.810 0.271 0.151 0.112 0.000 0.000 chr14 73846831 73890726
view PTGR3 216 74 39 28 0 0 0.837 0.287 0.151 0.109 0.000 0.000 chr18 75190113 75214139
view PTGS1 165 42 78 54 0 0 0.640 0.163 0.302 0.209 0.000 0.000 chr9 122366024 122400703
view PTGS2 216 76 38 27 1 0 0.837 0.295 0.147 0.105 0.004 0.000 chr1 186666791 186685423
view PTH1R 177 53 62 38 0 0 0.686 0.205 0.240 0.147 0.000 0.000 chr3 46872721 46908799
view PTH2R 146 47 87 48 0 0 0.566 0.182 0.337 0.186 0.000 0.000 chr2 208401792 208499506
view PTH2 221 80 29 17 0 0 0.857 0.310 0.112 0.066 0.000 0.000 chr19 49417419 49428441
view PTHLH 227 92 27 10 0 0 0.880 0.357 0.105 0.039 0.000 0.000 chr12 27953084 27977733
view PTH 211 74 47 31 0 0 0.818 0.287 0.182 0.120 0.000 0.000 chr11 13487054 13500997
view PTK2B 163 49 61 36 0 0 0.632 0.190 0.236 0.140 0.000 0.000 chr8 27320552 27464386
view PTK2 144 44 94 49 0 0 0.558 0.171 0.364 0.190 0.000 0.000 chr8 140652900 141006282
view PTK6 171 36 80 62 0 0 0.663 0.140 0.310 0.240 0.000 0.000 chr20 63523001 63542376
view PTK7 135 39 89 48 0 0 0.523 0.151 0.345 0.186 0.000 0.000 chr6 43071314 43166715
view PTMA 195 59 54 41 5 1 0.756 0.229 0.209 0.159 0.019 0.004 chr2 231703525 231718551
view PTMS 225 82 33 23 0 0 0.872 0.318 0.128 0.089 0.000 0.000 chr12 6761363 6775952
view PTN 147 40 73 43 0 0 0.570 0.155 0.283 0.167 0.000 0.000 chr7 137222341 137348733
view PTOV1 212 73 40 27 1 0 0.822 0.283 0.155 0.105 0.004 0.000 chr19 49846159 49865742
view PTP4A1 179 58 73 43 1 1 0.694 0.225 0.283 0.167 0.004 0.004 chr6 63567480 63588588
view PTP4A2 176 52 73 48 0 0 0.682 0.202 0.283 0.186 0.000 0.000 chr1 31901421 31943368
view PTP4A3 161 42 69 40 0 0 0.624 0.163 0.267 0.155 0.000 0.000 chr8 141387021 141437454
view PTPA 166 48 68 39 0 0 0.643 0.186 0.264 0.151 0.000 0.000 chr9 129106415 129153946
view PTPDC1 206 80 45 23 0 0 0.798 0.310 0.174 0.089 0.000 0.000 chr9 94079464 94114853
view PTPMT1 197 72 53 26 0 0 0.764 0.279 0.205 0.101 0.000 0.000 chr11 47560599 47578461
view PTPN11 149 55 88 40 0 0 0.578 0.213 0.341 0.155 0.000 0.000 chr12 112413947 112514918
view PTPN12 154 43 90 52 0 0 0.597 0.167 0.349 0.202 0.000 0.000 chr7 77532295 77645069
view PTPN13 98 34 112 54 0 0 0.380 0.132 0.434 0.209 0.000 0.000 chr4 86589315 86820161
view PTPN14 135 30 68 45 0 0 0.523 0.116 0.264 0.174 0.000 0.000 chr1 214343700 214556602
view PTPN18 189 62 60 35 0 0 0.733 0.240 0.233 0.136 0.000 0.000 chr2 130351056 130380405
view PTPN1 167 48 73 43 0 0 0.647 0.186 0.283 0.167 0.000 0.000 chr20 50505383 50590241
view PTPN20 155 51 84 44 0 0 0.601 0.198 0.326 0.171 0.000 0.000 chr10 46906428 47007322
view PTPN21 173 61 70 33 0 0 0.671 0.236 0.271 0.128 0.000 0.000 chr14 88460778 88560007
view PTPN22 178 63 72 37 0 0 0.690 0.244 0.279 0.143 0.000 0.000 chr1 113808811 113876712
view PTPN23 165 54 79 42 0 0 0.640 0.209 0.306 0.163 0.000 0.000 chr3 47376021 47418435
view PTPN2 184 56 57 36 0 0 0.713 0.217 0.221 0.140 0.000 0.000 chr18 12787152 12889237
view PTPN3 144 41 67 39 0 0 0.558 0.159 0.260 0.151 0.000 0.000 chr9 109370700 109503307
view PTPN4 125 26 97 61 0 0 0.484 0.101 0.376 0.236 0.000 0.000 chr2 119754922 119989899
view PTPN5 193 62 42 26 0 0 0.748 0.240 0.163 0.101 0.000 0.000 chr11 18722928 18796798
view PTPN6 192 58 60 44 1 0 0.744 0.225 0.233 0.171 0.004 0.000 chr12 6946356 6966316
view PTPN7 227 76 28 26 0 0 0.880 0.295 0.109 0.101 0.000 0.000 chr1 202142016 202165602