Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PRRG4 200 70 52 29 0 0 0.775 0.271 0.202 0.112 0.000 0.000 chr11 32824927 32863120
view PRRT1B 228 83 30 22 0 0 0.884 0.322 0.116 0.085 0.000 0.000 chr9 131540523 131564815
view PRRT1 210 70 42 30 1 0 0.814 0.271 0.163 0.116 0.004 0.000 chr6 32143363 32156939
view PRRT2 160 52 90 46 0 0 0.620 0.202 0.349 0.178 0.000 0.000 chr16 29807193 29820881
view PRRT3 188 60 63 39 0 0 0.729 0.233 0.244 0.151 0.000 0.000 chr3 9940542 9957408
view PRRT4 223 82 29 20 3 0 0.864 0.318 0.112 0.078 0.012 0.000 chr7 128345325 128366690
view PRRX1 177 58 56 34 0 0 0.686 0.225 0.217 0.132 0.000 0.000 chr1 170659131 170744421
view PRRX2 178 51 60 40 0 0 0.690 0.198 0.233 0.155 0.000 0.000 chr9 129660647 129727674
view PRSS12 181 68 63 34 0 0 0.702 0.264 0.244 0.132 0.000 0.000 chr4 118275038 118358003
view PRSS16 184 53 70 48 0 0 0.713 0.205 0.271 0.186 0.000 0.000 chr6 27242701 27261620
view PRSS1 182 59 73 44 0 0 0.705 0.229 0.283 0.171 0.000 0.000 chr7 142744472 142758072
view PRSS21 214 74 38 25 0 0 0.829 0.287 0.147 0.097 0.000 0.000 chr16 2812237 2826719
view PRSS22 205 67 47 33 1 1 0.795 0.260 0.182 0.128 0.004 0.004 chr16 2847730 2863170
view PRSS23 176 61 77 40 0 0 0.682 0.236 0.298 0.155 0.000 0.000 chr11 86795542 86816233
view PRSS27 190 51 56 45 0 0 0.736 0.198 0.217 0.174 0.000 0.000 chr16 2707422 2725224
view PRSS2 184 57 69 43 0 0 0.713 0.221 0.267 0.167 0.000 0.000 chr7 142765970 142779560
view PRSS33 192 55 58 45 1 0 0.744 0.213 0.225 0.174 0.004 0.000 chr16 2778953 2792560
view PRSS35 219 78 33 21 1 1 0.849 0.302 0.128 0.081 0.004 0.004 chr6 83507534 83530704
view PRSS36 164 35 86 64 0 0 0.636 0.136 0.333 0.248 0.000 0.000 chr16 31133926 31155066
view PRSS37 203 78 53 26 1 1 0.787 0.302 0.205 0.101 0.004 0.004 chr7 141831300 141846485
view PRSS38 224 82 27 17 0 0 0.868 0.318 0.105 0.066 0.000 0.000 chr1 227810675 227851470
view PRSS3 211 75 44 28 2 1 0.818 0.291 0.171 0.109 0.008 0.004 chr9 33790561 33804231
view PRSS41 212 76 42 25 0 0 0.822 0.295 0.163 0.097 0.000 0.000 chr16 2793470 2810304
view PRSS48 213 79 43 24 0 0 0.826 0.306 0.167 0.093 0.000 0.000 chr4 151272161 151296862
view PRSS50 209 69 48 35 0 0 0.810 0.267 0.186 0.136 0.000 0.000 chr3 46707117 46722869
view PRSS53 158 41 96 60 0 0 0.612 0.159 0.372 0.233 0.000 0.000 chr16 31078437 31093943
view PRSS54 205 81 48 20 1 1 0.795 0.314 0.186 0.078 0.004 0.004 chr16 58274997 58300025
view PRSS55 239 94 17 9 0 0 0.926 0.364 0.066 0.035 0.000 0.000 chr8 10520532 10543819
view PRSS56 219 82 35 20 0 0 0.849 0.318 0.136 0.078 0.000 0.000 chr2 232515388 232530716
view PRSS57 220 76 34 25 0 0 0.853 0.295 0.132 0.097 0.000 0.000 chr19 680546 700452
view PRSS58 202 68 53 34 1 1 0.783 0.264 0.205 0.132 0.004 0.004 chr7 142247143 142263058
view PRSS8 150 31 102 70 0 0 0.581 0.120 0.395 0.271 0.000 0.000 chr16 31126433 31140727
view PRTFDC1 168 54 55 36 0 0 0.651 0.209 0.213 0.140 0.000 0.000 chr10 24843614 24957606
view PRTG 141 34 91 56 0 0 0.547 0.132 0.353 0.217 0.000 0.000 chr15 55606544 55748152
view PRTN3 207 63 44 37 0 0 0.802 0.244 0.171 0.143 0.000 0.000 chr19 835999 853175
view PRUNE1 203 67 43 29 0 0 0.787 0.260 0.167 0.112 0.000 0.000 chr1 151003449 151040713
view PRUNE2 119 22 72 41 0 0 0.461 0.085 0.279 0.159 0.000 0.000 chr9 76606376 76911114
view PRXL2A 149 28 93 67 0 0 0.578 0.109 0.360 0.260 0.000 0.000 chr10 80403551 80442115
view PRXL2B 206 68 52 37 0 0 0.798 0.264 0.202 0.143 0.000 0.000 chr1 2581777 2596468
view PRXL2C 144 31 100 62 0 0 0.558 0.120 0.388 0.240 0.000 0.000 chr9 96634577 96660317
view PRX 152 30 95 67 0 0 0.589 0.116 0.368 0.260 0.000 0.000 chr19 40388768 40418378
view PRY2 5 1 115 49 0 0 0.019 0.004 0.446 0.190 0.000 0.000 chrY 22066756 22101007
view PRY 0 0 119 51 0 0 0.000 0.000 0.461 0.198 0.000 0.000 chrY 22485397 22519637
view PSAPL1 227 79 28 23 0 0 0.880 0.306 0.109 0.089 0.000 0.000 chr4 7425285 7439930
view PSAP 214 77 32 20 0 0 0.829 0.298 0.124 0.078 0.000 0.000 chr10 71811298 71856251
view PSAT1 207 69 42 29 0 0 0.802 0.267 0.163 0.112 0.000 0.000 chr9 78292125 78335093
view PSCA 215 86 39 16 1 0 0.833 0.333 0.151 0.062 0.004 0.000 chr8 142675495 142687725
view PSD2 137 41 102 54 0 0 0.531 0.159 0.395 0.209 0.000 0.000 chr5 139790808 139849466
view PSD3 113 22 64 34 0 0 0.438 0.085 0.248 0.132 0.000 0.000 chr8 18522303 19018703
view PSD4 189 58 51 33 0 0 0.733 0.225 0.198 0.128 0.000 0.000 chr2 113168971 113214391