Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PRLH 201 63 52 38 1 1 0.779 0.244 0.202 0.147 0.004 0.004 chr2 237561574 237572175
view PRLR 106 25 84 47 0 0 0.411 0.097 0.326 0.182 0.000 0.000 chr5 35050702 35235487
view PRL 222 79 32 23 1 0 0.860 0.306 0.124 0.089 0.004 0.000 chr6 22282246 22302036
view PRM1 204 62 52 41 0 0 0.791 0.240 0.202 0.159 0.000 0.000 chr16 11275841 11286330
view PRM2 200 58 56 45 0 0 0.775 0.225 0.217 0.174 0.000 0.000 chr16 11270639 11281480
view PRM3 206 66 52 39 0 0 0.798 0.256 0.202 0.151 0.000 0.000 chr16 11268199 11278629
view PRMT1 198 57 55 43 0 0 0.767 0.221 0.213 0.167 0.000 0.000 chr19 49672271 49693447
view PRMT2 212 77 41 24 0 0 0.822 0.298 0.159 0.093 0.000 0.000 chr21 46630674 46670124
view PRMT3 189 66 59 32 0 0 0.733 0.256 0.229 0.124 0.000 0.000 chr11 20382716 20514338
view PRMT5 181 49 71 51 0 0 0.702 0.190 0.275 0.198 0.000 0.000 chr14 22915529 22934376
view PRMT6 194 67 60 37 1 0 0.752 0.260 0.233 0.143 0.004 0.000 chr1 107051674 107064294
view PRMT7 141 36 95 55 0 0 0.547 0.140 0.368 0.213 0.000 0.000 chr16 68306019 68363584
view PRMT8 181 56 59 39 0 0 0.702 0.217 0.229 0.151 0.000 0.000 chr12 3486203 3598973
view PRMT9 110 31 130 65 0 0 0.426 0.120 0.504 0.252 0.000 0.000 chr4 147632785 147689163
view PRND 239 90 17 14 1 0 0.926 0.349 0.066 0.054 0.004 0.000 chr20 4716909 4733460
view PRNP 165 39 84 60 0 0 0.640 0.151 0.326 0.233 0.000 0.000 chr20 4681456 4706588
view PROB1 173 56 81 46 0 0 0.671 0.217 0.314 0.178 0.000 0.000 chr5 139385592 139400104
view PROCA1 159 46 93 58 2 1 0.616 0.178 0.360 0.225 0.008 0.004 chr17 28698197 28716888
view PROCR 195 58 58 42 0 0 0.756 0.225 0.225 0.163 0.000 0.000 chr20 35167072 35182362
view PROC 208 71 50 34 0 0 0.806 0.275 0.194 0.132 0.000 0.000 chr2 127413427 127434242
view PRODH2 213 70 42 33 2 1 0.826 0.271 0.163 0.128 0.008 0.004 chr19 35794988 35817845
view PRODH 204 62 41 33 3 0 0.791 0.240 0.159 0.128 0.012 0.000 chr22 18907781 18941293
view PROK1 227 87 30 17 0 0 0.880 0.337 0.116 0.066 0.000 0.000 chr1 110446149 110462358
view PROK2 218 81 36 22 1 1 0.845 0.314 0.140 0.085 0.004 0.004 chr3 71766655 71790148
view PROKR1 220 73 34 28 0 0 0.853 0.283 0.132 0.109 0.000 0.000 chr2 68638579 68663251
view PROKR2 211 77 44 26 0 0 0.818 0.298 0.171 0.101 0.000 0.000 chr20 5294218 5321954
view PROM1 186 61 47 33 0 0 0.721 0.236 0.182 0.128 0.000 0.000 chr4 15963228 16089023
view PROM2 185 60 61 33 0 0 0.717 0.233 0.236 0.128 0.000 0.000 chr2 95269449 95296302
view PROP1 217 75 38 27 0 0 0.841 0.291 0.147 0.105 0.000 0.000 chr5 177987235 178001242
view PRORP 156 39 72 50 0 0 0.605 0.151 0.279 0.194 0.000 0.000 chr14 35117552 35282622
view PROS1 156 43 82 53 0 0 0.605 0.167 0.318 0.205 0.000 0.000 chr3 93868051 93978896
view PROSER1 189 56 64 45 0 0 0.733 0.217 0.248 0.174 0.000 0.000 chr13 39004865 39043089
view PROSER2 173 47 67 43 0 0 0.671 0.182 0.260 0.167 0.000 0.000 chr10 11818356 11877277
view PROSER3 211 67 44 35 0 0 0.818 0.260 0.171 0.136 0.000 0.000 chr19 35753176 35776166
view PROX1 136 37 97 54 0 0 0.527 0.143 0.376 0.209 0.000 0.000 chr1 213982973 214046510
view PROX2 191 70 61 31 0 0 0.740 0.271 0.236 0.120 0.000 0.000 chr14 74848033 74881145
view PROZ 188 56 56 38 0 0 0.729 0.217 0.217 0.147 0.000 0.000 chr13 113153648 113177386
view PRPF18 194 61 50 33 0 0 0.752 0.236 0.194 0.128 0.000 0.000 chr10 13581965 13635859
view PRPF19 174 59 83 46 0 0 0.674 0.229 0.322 0.178 0.000 0.000 chr11 60885547 60911585
view PRPF31 113 29 105 47 0 0 0.438 0.112 0.407 0.182 0.000 0.000 chr19 54110754 54136713
view PRPF38A 153 51 102 52 0 0 0.593 0.198 0.395 0.202 0.000 0.000 chr1 52399602 52425836
view PRPF38B 180 55 69 45 0 0 0.698 0.213 0.267 0.174 0.000 0.000 chr1 108687310 108707928
view PRPF39 121 32 122 64 0 0 0.469 0.124 0.473 0.248 0.000 0.000 chr14 45079116 45121282
view PRPF3 180 60 63 32 0 0 0.698 0.233 0.244 0.124 0.000 0.000 chr1 150316533 150358233
view PRPF40A 185 52 60 44 0 0 0.717 0.202 0.233 0.171 0.000 0.000 chr2 152646732 152722461
view PRPF40B 96 16 152 83 0 0 0.372 0.062 0.589 0.322 0.000 0.000 chr12 49618561 49649665
view PRPF4B 183 56 65 44 0 0 0.709 0.217 0.252 0.171 0.000 0.000 chr6 4016300 4069983
view PRPF4 212 78 43 25 1 1 0.822 0.302 0.167 0.097 0.004 0.004 chr9 113270658 113297905
view PRPF6 146 28 83 54 0 0 0.566 0.109 0.322 0.209 0.000 0.000 chr20 63976132 64038100
view PRPF8 145 33 89 51 0 0 0.562 0.128 0.345 0.198 0.000 0.000 chr17 1645629 1689867