Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PPP2R2D 196 67 45 26 0 0 0.760 0.260 0.174 0.101 0.000 0.000 chr10 131896008 131964834
view PPP2R3A 118 23 106 62 0 0 0.457 0.089 0.411 0.240 0.000 0.000 chr3 135960728 136152894
view PPP2R3B 8 1 30 9 0 0 0.031 0.004 0.116 0.035 0.000 0.000 chrX 328933 391907
view PPP2R3C 188 60 63 39 0 0 0.729 0.233 0.244 0.151 0.000 0.000 chr14 35080472 35126990
view PPP2R5A 191 68 62 34 0 0 0.740 0.264 0.240 0.132 0.000 0.000 chr1 212280410 212366853
view PPP2R5B 213 77 41 25 0 0 0.826 0.298 0.159 0.097 0.000 0.000 chr11 64919689 64939475
view PPP2R5C 68 11 133 67 0 0 0.264 0.043 0.516 0.260 0.000 0.000 chr14 101756709 101932977
view PPP2R5D 152 40 91 56 0 0 0.589 0.155 0.353 0.217 0.000 0.000 chr6 42979570 43017342
view PPP2R5E 125 40 97 50 0 0 0.484 0.155 0.376 0.194 0.000 0.000 chr14 63366364 63548377
view PPP3CA 95 24 102 56 0 0 0.368 0.093 0.395 0.217 0.000 0.000 chr4 101018418 101352526
view PPP3CB 100 29 142 68 0 0 0.388 0.112 0.550 0.264 0.000 0.000 chr10 73431433 73501024
view PPP3CC 162 53 73 40 0 0 0.628 0.205 0.283 0.155 0.000 0.000 chr8 22436078 22546125
view PPP3R1 198 71 47 25 0 0 0.767 0.275 0.182 0.097 0.000 0.000 chr2 68173857 68257532
view PPP3R2 223 81 34 23 0 0 0.864 0.314 0.132 0.089 0.000 0.000 chr9 101586604 101599969
view PPP4C 183 56 64 40 0 0 0.709 0.217 0.248 0.155 0.000 0.000 chr16 30070994 30090376
view PPP4R1 193 67 44 26 0 0 0.748 0.260 0.171 0.101 0.000 0.000 chr18 9541794 9619559
view PPP4R2 179 68 60 29 0 0 0.694 0.264 0.233 0.112 0.000 0.000 chr3 72991811 73074198
view PPP4R3A 184 67 61 33 1 1 0.713 0.260 0.236 0.128 0.004 0.004 chr14 91452508 91515310
view PPP4R3B 190 69 57 30 0 0 0.736 0.267 0.221 0.116 0.000 0.000 chr2 55542292 55622622
view PPP4R3C 99 29 154 73 2 1 0.384 0.112 0.597 0.283 0.008 0.004 chrX 27455207 27468341
view PPP4R4 153 50 93 50 0 0 0.593 0.194 0.360 0.194 0.000 0.000 chr14 94169322 94284734
view PPP5C 196 64 45 26 0 0 0.760 0.248 0.174 0.101 0.000 0.000 chr19 46342087 46395975
view PPP6C 196 74 53 28 0 0 0.760 0.287 0.205 0.109 0.000 0.000 chr9 125141573 125194803
view PPP6R1 188 51 57 43 0 0 0.729 0.198 0.221 0.167 0.000 0.000 chr19 55224779 55264017
view PPP6R2 169 48 58 33 0 0 0.655 0.186 0.225 0.128 0.000 0.000 chr22 50338327 50450090
view PPP6R3 125 36 111 59 0 0 0.484 0.140 0.430 0.229 0.000 0.000 chr11 68455752 68620334
view PPRC1 193 64 54 31 0 0 0.748 0.248 0.209 0.120 0.000 0.000 chr10 102128040 102155333
view PPT1 197 73 53 28 0 0 0.764 0.283 0.205 0.109 0.000 0.000 chr1 40067712 40102252
view PPT2 211 76 44 27 0 0 0.818 0.295 0.171 0.105 0.000 0.000 chr6 32149141 32168675
view PPTC7 163 49 81 46 0 0 0.632 0.190 0.314 0.178 0.000 0.000 chr12 110528245 110588318
view PPWD1 191 62 63 42 0 0 0.740 0.240 0.244 0.163 0.000 0.000 chr5 65558296 65592549
view PPY 188 56 65 45 0 0 0.729 0.217 0.252 0.174 0.000 0.000 chr17 43935804 43947476
view PQBP1 92 22 163 80 0 0 0.357 0.085 0.632 0.310 0.000 0.000 chrX 48892930 48908143
view PRAC1 211 77 44 25 1 1 0.818 0.298 0.171 0.097 0.004 0.004 chr17 48716719 48727518
view PRAC2 216 81 41 23 0 0 0.837 0.314 0.159 0.089 0.000 0.000 chr17 48718185 48729758
view PRADC1 188 64 69 40 0 0 0.729 0.248 0.267 0.155 0.000 0.000 chr2 73223010 73238239
view PRAF2 71 13 182 88 0 0 0.275 0.050 0.705 0.341 0.000 0.000 chrX 49066161 49079002
view PRAG1 167 42 68 49 0 0 0.647 0.163 0.264 0.190 0.000 0.000 chr8 8312736 8391439
view PRAM1 210 67 44 34 1 1 0.814 0.260 0.171 0.132 0.004 0.004 chr19 8485056 8507640
view PRAMEF10 188 69 59 32 4 0 0.729 0.267 0.229 0.124 0.016 0.000 chr1 12887896 12903270
view PRAMEF11 201 71 42 28 7 0 0.779 0.275 0.163 0.109 0.027 0.000 chr1 12819605 12836410
view PRAMEF12 200 62 54 39 0 0 0.775 0.240 0.209 0.151 0.000 0.000 chr1 12768738 12782906
view PRAMEF13 26 4 89 31 0 0 0.101 0.016 0.345 0.120 0.000 0.000 chr1 13191188 13206409
view PRAMEF14 127 32 110 60 0 0 0.492 0.124 0.426 0.233 0.000 0.000 chr1 13336892 13352134
view PRAMEF15 150 44 95 53 1 0 0.581 0.171 0.368 0.205 0.004 0.000 chr1 13310581 13327598
view PRAMEF17 214 75 43 29 0 0 0.829 0.291 0.167 0.112 0.000 0.000 chr1 13384632 13397629
view PRAMEF18 132 45 87 40 29 11 0.512 0.174 0.337 0.155 0.112 0.043 chr1 13217695 13231154
view PRAMEF19 224 84 30 17 1 1 0.868 0.326 0.116 0.066 0.004 0.004 chr1 13363431 13376947
view PRAMEF1 190 58 56 40 2 0 0.736 0.225 0.217 0.155 0.008 0.000 chr1 12786397 12801628
view PRAMEF20 220 77 35 25 0 0 0.853 0.298 0.136 0.097 0.000 0.000 chr1 13405450 13426328