Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PPDPFL 215 81 39 22 2 0 0.833 0.314 0.151 0.085 0.008 0.000 chr8 49067344 49081093
view PPDPF 196 59 56 40 0 0 0.760 0.229 0.217 0.155 0.000 0.000 chr20 63515765 63527206
view PPEF1 50 13 182 79 0 0 0.194 0.050 0.705 0.306 0.000 0.000 chrX 18702645 18832917
view PPEF2 134 23 101 69 0 0 0.519 0.089 0.391 0.267 0.000 0.000 chr4 75854867 75907452
view PPFIA1 140 34 97 58 0 0 0.543 0.132 0.376 0.225 0.000 0.000 chr11 70265690 70389396
view PPFIA2 84 26 81 39 0 0 0.326 0.101 0.314 0.151 0.000 0.000 chr12 81252975 81764350
view PPFIA3 180 49 65 46 0 0 0.698 0.190 0.252 0.178 0.000 0.000 chr19 49114544 49156026
view PPFIA4 208 70 41 27 0 0 0.806 0.271 0.159 0.105 0.000 0.000 chr1 203021491 203083736
view PPFIBP1 156 55 52 27 0 0 0.605 0.213 0.202 0.105 0.000 0.000 chr12 27519206 27700564
view PPFIBP2 158 35 59 42 0 0 0.612 0.136 0.229 0.163 0.000 0.000 chr11 7508999 7658756
view PPHLN1 187 69 55 29 0 0 0.725 0.267 0.213 0.112 0.000 0.000 chr12 42321167 42447181
view PPIAL4A 139 77 101 28 0 0 0.539 0.298 0.391 0.109 0.000 0.000 chr1 120884771 120895530
view PPIAL4C 223 87 30 15 2 0 0.864 0.337 0.116 0.058 0.008 0.000 chr1 149578848 149589607
view PPIAL4D 198 68 57 34 1 1 0.767 0.264 0.221 0.132 0.004 0.004 chr1 145236415 145247174
view PPIAL4E 101 32 85 40 39 9 0.391 0.124 0.329 0.155 0.151 0.035 chr1 144367875 144378634
view PPIAL4F 110 41 52 31 86 24 0.426 0.159 0.202 0.120 0.333 0.093 chr1 144587893 144598652
view PPIAL4G 224 87 31 16 2 1 0.868 0.337 0.120 0.062 0.008 0.004 chr1 148477548 148488302
view PPIAL4H 207 74 46 30 4 1 0.802 0.287 0.178 0.116 0.016 0.004 chr1 146339006 146349765
view PPIA 214 72 40 29 0 0 0.829 0.279 0.155 0.112 0.000 0.000 chr7 44791681 44808117
view PPIB 170 45 87 59 0 0 0.659 0.174 0.337 0.229 0.000 0.000 chr15 64150817 64168022
view PPIC 190 63 60 36 0 0 0.736 0.244 0.233 0.140 0.000 0.000 chr5 123018250 123041725
view PPID 173 63 77 36 0 0 0.671 0.244 0.298 0.140 0.000 0.000 chr4 158704127 158728396
view PPIE 216 80 38 22 0 0 0.837 0.310 0.147 0.085 0.000 0.000 chr1 39733882 39761769
view PPIF 203 71 51 30 0 0 0.787 0.275 0.198 0.116 0.000 0.000 chr10 79342469 79360334
view PPIG 190 67 56 31 0 0 0.736 0.260 0.217 0.120 0.000 0.000 chr2 169579351 169646406
view PPIH 185 61 68 40 0 0 0.717 0.236 0.264 0.155 0.000 0.000 chr1 42653423 42681758
view PPIL1 204 77 51 26 0 0 0.791 0.298 0.198 0.101 0.000 0.000 chr6 36849829 36879803
view PPIL2 188 59 51 30 0 0 0.729 0.229 0.198 0.116 0.000 0.000 chr22 21661012 21702907
view PPIL3 167 40 81 56 0 0 0.647 0.155 0.314 0.217 0.000 0.000 chr2 200865907 200894077
view PPIL4 152 47 91 50 0 0 0.589 0.182 0.353 0.194 0.000 0.000 chr6 149499495 149551043
view PPIL6 197 75 49 24 0 0 0.764 0.291 0.190 0.093 0.000 0.000 chr6 109385215 109445628
view PPIP5K1 56 9 138 65 0 0 0.217 0.035 0.535 0.252 0.000 0.000 chr15 43528475 43595208
view PPIP5K2 141 50 95 45 0 0 0.547 0.194 0.368 0.174 0.000 0.000 chr5 103115301 103217799
view PPL 185 53 57 39 0 0 0.717 0.205 0.221 0.151 0.000 0.000 chr16 4877507 4942148
view PPM1A 133 26 110 70 0 0 0.516 0.101 0.426 0.271 0.000 0.000 chr14 60244221 60304087
view PPM1B 178 60 61 33 0 0 0.690 0.233 0.236 0.128 0.000 0.000 chr2 44163875 44236472
view PPM1D 106 34 120 56 0 0 0.411 0.132 0.465 0.217 0.000 0.000 chr17 60595193 60671280
view PPM1E 155 48 87 47 0 0 0.601 0.186 0.337 0.182 0.000 0.000 chr17 58750854 58990179
view PPM1F 170 50 71 44 0 0 0.659 0.194 0.275 0.171 0.000 0.000 chr22 21914425 21957848
view PPM1G 129 27 111 66 0 0 0.500 0.105 0.430 0.256 0.000 0.000 chr2 27376199 27414591
view PPM1H 125 37 61 33 0 0 0.484 0.143 0.236 0.128 0.000 0.000 chr12 62638994 62940150
view PPM1J 210 71 45 31 0 0 0.814 0.275 0.174 0.120 0.000 0.000 chr1 112704998 112720332
view PPM1K 175 54 71 41 0 0 0.678 0.209 0.275 0.159 0.000 0.000 chr4 88252620 88289561
view PPM1L 103 27 89 51 0 0 0.399 0.105 0.345 0.198 0.000 0.000 chr3 160751231 161083902
view PPM1M 189 54 60 44 3 1 0.733 0.209 0.233 0.171 0.012 0.004 chr3 52240759 52255599
view PPM1N 217 76 37 26 1 1 0.841 0.295 0.143 0.101 0.004 0.004 chr19 45493443 45507513
view PPME1 184 63 63 34 0 0 0.713 0.244 0.244 0.132 0.000 0.000 chr11 74166289 74259703
view PPOX 181 64 76 40 0 0 0.702 0.248 0.295 0.155 0.000 0.000 chr1 161161426 161176220
view PPP1CA 188 59 64 41 0 0 0.729 0.229 0.248 0.159 0.000 0.000 chr11 67393183 67406858
view PPP1CB 182 61 63 36 0 0 0.705 0.236 0.244 0.140 0.000 0.000 chr2 28746830 28807940