Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PPP1CC 168 42 73 48 0 0 0.651 0.163 0.283 0.186 0.000 0.000 chr12 110714680 110747891
view PPP1R10 229 85 24 18 0 0 0.888 0.329 0.093 0.070 0.000 0.000 chr6 30595413 30622243
view PPP1R11 221 83 34 20 2 1 0.857 0.322 0.132 0.078 0.008 0.004 chr6 30062198 30075333
view PPP1R12A 155 56 75 37 0 0 0.601 0.217 0.291 0.143 0.000 0.000 chr12 79768568 79940097
view PPP1R12B 126 37 99 55 0 0 0.488 0.143 0.384 0.213 0.000 0.000 chr1 202343699 202597702
view PPP1R12C 194 58 51 34 0 0 0.752 0.225 0.198 0.132 0.000 0.000 chr19 55085918 55122637
view PPP1R13B 165 40 76 55 0 0 0.640 0.155 0.295 0.213 0.000 0.000 chr14 103728195 103852575
view PPP1R13L 187 53 56 39 0 0 0.725 0.205 0.217 0.151 0.000 0.000 chr19 45374638 45410069
view PPP1R14A 212 75 41 26 1 1 0.822 0.291 0.159 0.101 0.004 0.004 chr19 38246237 38261374
view PPP1R14B 182 52 66 43 0 0 0.705 0.202 0.256 0.167 0.000 0.000 chr11 64239479 64251943
view PPP1R14C 155 30 73 59 0 0 0.601 0.116 0.283 0.229 0.000 0.000 chr6 150138044 150255392
view PPP1R14D 193 68 61 33 0 0 0.748 0.264 0.236 0.128 0.000 0.000 chr15 40810451 40833708
view PPP1R15A 202 68 52 33 0 0 0.783 0.264 0.202 0.128 0.000 0.000 chr19 48867421 48881058
view PPP1R15B 196 64 62 41 0 0 0.760 0.248 0.240 0.159 0.000 0.000 chr1 204398381 204416817
view PPP1R16A 177 56 64 39 0 0 0.686 0.217 0.248 0.151 0.000 0.000 chr8 144472982 144507121
view PPP1R16B 121 40 103 50 0 0 0.469 0.155 0.399 0.194 0.000 0.000 chr20 38800697 38928024
view PPP1R17 220 84 34 18 0 0 0.853 0.326 0.132 0.070 0.000 0.000 chr7 31682215 31713455
view PPP1R18 212 75 43 27 0 0 0.822 0.291 0.167 0.105 0.000 0.000 chr6 30671389 30691645
view PPP1R1A 221 82 35 21 0 0 0.857 0.318 0.136 0.081 0.000 0.000 chr12 54574246 54593659
view PPP1R1B 172 52 82 49 0 0 0.667 0.202 0.318 0.190 0.000 0.000 chr17 39621952 39641624
view PPP1R1C 171 64 52 28 0 0 0.663 0.248 0.202 0.109 0.000 0.000 chr2 181980853 182122756
view PPP1R21 185 61 55 32 0 0 0.717 0.236 0.213 0.124 0.000 0.000 chr2 48435766 48520386
view PPP1R26 230 81 24 21 1 0 0.891 0.314 0.093 0.081 0.004 0.000 chr9 135474782 135493892
view PPP1R27 172 50 83 52 0 0 0.667 0.194 0.322 0.202 0.000 0.000 chr17 81828492 81840050
view PPP1R2B 214 75 42 28 2 2 0.829 0.291 0.163 0.109 0.008 0.008 chr5 156845295 156857528
view PPP1R2C 104 40 150 63 1 0 0.403 0.155 0.581 0.244 0.004 0.000 chrX 42772366 42783163
view PPP1R2 193 66 59 35 0 0 0.748 0.256 0.229 0.136 0.000 0.000 chr3 195509428 195548325
view PPP1R32 146 26 104 73 0 0 0.566 0.101 0.403 0.283 0.000 0.000 chr11 61476120 61495928
view PPP1R35 166 46 89 57 0 0 0.643 0.178 0.345 0.221 0.000 0.000 chr7 100430282 100441497
view PPP1R36 163 48 82 49 0 0 0.632 0.186 0.318 0.190 0.000 0.000 chr14 64544961 64594381
view PPP1R37 170 42 69 49 0 0 0.659 0.163 0.267 0.190 0.000 0.000 chr19 45088179 45152285
view PPP1R3A 146 45 99 53 0 0 0.566 0.174 0.384 0.205 0.000 0.000 chr7 113871777 113924009
view PPP1R3B 221 83 34 20 0 0 0.857 0.322 0.132 0.078 0.000 0.000 chr8 9131255 9155658
view PPP1R3C 179 49 76 53 0 0 0.694 0.190 0.295 0.205 0.000 0.000 chr10 91623442 91638071
view PPP1R3D 190 65 62 37 0 0 0.736 0.252 0.240 0.143 0.000 0.000 chr20 59931663 59945305
view PPP1R3E 213 79 43 24 0 0 0.826 0.306 0.167 0.093 0.000 0.000 chr14 23290652 23307859
view PPP1R3F 82 23 172 80 0 0 0.318 0.089 0.667 0.310 0.000 0.000 chrX 49264793 49293090
view PPP1R3G 206 70 49 32 0 0 0.798 0.271 0.190 0.124 0.000 0.000 chr6 5080341 5094487
view PPP1R42 65 11 170 83 0 0 0.252 0.043 0.659 0.322 0.000 0.000 chr8 66959103 67033554
view PPP1R7 197 62 54 37 0 0 0.764 0.240 0.209 0.143 0.000 0.000 chr2 241145467 241188652
view PPP1R8 169 46 80 54 0 0 0.655 0.178 0.310 0.209 0.000 0.000 chr1 27825782 27856676
view PPP1R9A 144 43 71 42 0 0 0.558 0.167 0.275 0.163 0.000 0.000 chr7 94902594 95301400
view PPP1R9B 195 55 54 43 0 0 0.756 0.213 0.209 0.167 0.000 0.000 chr17 50128737 50155677
view PPP2CA 181 66 65 33 0 0 0.702 0.256 0.252 0.128 0.000 0.000 chr5 134189332 134231073
view PPP2CB 151 46 99 53 0 0 0.585 0.178 0.384 0.205 0.000 0.000 chr8 30780616 30817818
view PPP2R1A 191 56 50 36 0 0 0.740 0.217 0.194 0.140 0.000 0.000 chr19 52185052 52234518
view PPP2R1B 178 55 73 43 0 0 0.690 0.213 0.283 0.167 0.000 0.000 chr11 111732877 111771389
view PPP2R2A 169 51 73 44 0 0 0.655 0.198 0.283 0.171 0.000 0.000 chr8 26286508 26377680
view PPP2R2B 84 18 96 54 0 0 0.326 0.070 0.372 0.209 0.000 0.000 chr5 146575742 146883757
view PPP2R2C 148 28 63 45 0 0 0.574 0.109 0.244 0.174 0.000 0.000 chr4 6315581 6477614