Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PWP1 170 53 77 43 0 0 0.659 0.205 0.298 0.167 0.000 0.000 chr12 107680799 107718162
view PWP2 42 10 111 43 0 0 0.163 0.039 0.430 0.167 0.000 0.000 chr21 44102399 44136181
view PWWP2A 191 66 57 33 0 0 0.740 0.256 0.221 0.128 0.000 0.000 chr5 160086339 160124450
view PWWP2B 186 48 58 45 0 0 0.721 0.186 0.225 0.174 0.000 0.000 chr10 132392200 132422859
view PWWP3A 205 75 48 27 0 0 0.795 0.291 0.186 0.105 0.000 0.000 chr19 1349959 1383429
view PWWP3B 57 8 189 88 0 0 0.221 0.031 0.733 0.341 0.000 0.000 chrX 106163305 106213956
view PWWP4 112 30 69 34 24 3 0.434 0.116 0.267 0.132 0.093 0.012 chrX 153261152 153284145
view PXDC1 205 73 42 23 1 1 0.795 0.283 0.163 0.089 0.004 0.004 chr6 3717619 3756713
view PXDNL 60 11 115 55 0 0 0.233 0.043 0.446 0.213 0.000 0.000 chr8 51314577 51814445
view PXDN 160 40 60 41 0 0 0.620 0.155 0.233 0.159 0.000 0.000 chr2 1626887 1749515
view PXK 149 37 93 59 0 0 0.578 0.143 0.360 0.229 0.000 0.000 chr3 58327892 58431127
view PXMP2 174 41 67 48 1 0 0.674 0.159 0.260 0.186 0.004 0.000 chr12 132682587 132709985
view PXMP4 193 61 58 38 0 0 0.748 0.236 0.225 0.147 0.000 0.000 chr20 33697758 33725310
view PXN 161 47 76 42 0 0 0.624 0.182 0.295 0.163 0.000 0.000 chr12 120205447 120270730
view PXT1 194 66 52 30 0 0 0.752 0.256 0.202 0.116 0.000 0.000 chr6 36385551 36447854
view PXYLP1 191 61 53 37 0 0 0.740 0.236 0.205 0.143 0.000 0.000 chr3 141226825 141299924
view PYCARD 176 51 73 46 1 0 0.682 0.198 0.283 0.178 0.004 0.000 chr16 31196486 31207760
view PYCR1 187 52 61 43 0 0 0.725 0.202 0.236 0.167 0.000 0.000 chr17 81927391 81942300
view PYCR2 223 82 32 20 0 0 0.864 0.318 0.124 0.078 0.000 0.000 chr1 225914878 225929250
view PYCR3 222 81 31 21 0 0 0.860 0.314 0.120 0.081 0.000 0.000 chr8 143598210 143614575
view PYDC1 172 50 78 48 0 0 0.667 0.194 0.302 0.186 0.000 0.000 chr16 31210962 31222135
view PYDC2 216 82 38 19 1 1 0.837 0.318 0.147 0.074 0.004 0.004 chr3 191456163 191466456
view PYDC5 229 89 27 14 1 1 0.888 0.345 0.105 0.054 0.004 0.004 chr1 158994971 159007751
view PYGB 185 49 57 43 0 0 0.717 0.190 0.221 0.167 0.000 0.000 chr20 25243085 25303012
view PYGL 194 70 51 26 0 0 0.752 0.271 0.198 0.101 0.000 0.000 chr14 50900217 50949483
view PYGM 174 51 78 49 0 0 0.674 0.198 0.302 0.190 0.000 0.000 chr11 64741398 64764974
view PYGO1 205 73 44 26 0 0 0.795 0.283 0.171 0.101 0.000 0.000 chr15 55533884 55593345
view PYGO2 150 41 105 61 0 0 0.581 0.159 0.407 0.236 0.000 0.000 chr1 154952026 154966782
view PYHIN1 198 73 41 17 0 0 0.767 0.283 0.159 0.066 0.000 0.000 chr1 158926552 158982059
view PYM1 171 53 76 46 0 0 0.663 0.205 0.295 0.178 0.000 0.000 chr12 55896413 55932894
view PYROXD1 207 78 46 24 0 0 0.802 0.302 0.178 0.093 0.000 0.000 chr12 21432655 21476250
view PYROXD2 208 75 36 20 0 0 0.806 0.291 0.140 0.078 0.000 0.000 chr10 98378568 98420182
view PYURF 222 80 33 22 0 0 0.860 0.310 0.128 0.085 0.000 0.000 chr4 88515998 88528776
view PYY 181 55 74 48 0 0 0.702 0.213 0.287 0.186 0.000 0.000 chr17 43947733 43958940
view PZP 166 47 66 39 0 0 0.643 0.182 0.256 0.151 0.000 0.000 chr12 9143840 9213395
view QARS1 141 27 113 76 0 0 0.547 0.105 0.438 0.295 0.000 0.000 chr3 49090932 49109757
view QDPR 202 63 50 36 1 1 0.783 0.244 0.194 0.140 0.004 0.004 chr4 17481395 17517090
view QKI 150 42 95 55 0 0 0.581 0.163 0.368 0.213 0.000 0.000 chr6 163409718 163583592
view QNG1 196 71 56 30 0 0 0.760 0.275 0.217 0.116 0.000 0.000 chr9 83933311 83961742
view QPCTL 222 79 31 21 0 0 0.860 0.306 0.120 0.081 0.000 0.000 chr19 45687666 45708987
view QPCT 220 83 30 16 0 0 0.853 0.322 0.116 0.062 0.000 0.000 chr2 37339630 37378322
view QPRT 159 37 85 57 0 0 0.616 0.143 0.329 0.221 0.000 0.000 chr16 29674180 29703699
view QRFPR 191 56 57 42 0 0 0.740 0.217 0.221 0.163 0.000 0.000 chr4 121323642 121386018
view QRFP 213 73 42 30 0 0 0.826 0.283 0.163 0.116 0.000 0.000 chr9 130887707 130901812
view QRICH1 112 20 116 63 0 0 0.434 0.078 0.450 0.244 0.000 0.000 chr3 49024707 49099071
view QRICH2 181 57 64 37 0 0 0.702 0.221 0.248 0.143 0.000 0.000 chr17 76269049 76313276
view QRSL1 210 83 44 21 0 0 0.814 0.322 0.171 0.081 0.000 0.000 chr6 106624578 106673417
view QSER1 117 19 109 65 0 0 0.453 0.074 0.422 0.252 0.000 0.000 chr11 32887811 32985270
view QSOX1 193 64 54 31 0 0 0.748 0.248 0.209 0.120 0.000 0.000 chr1 180149869 180209030
view QSOX2 195 60 49 33 0 0 0.756 0.233 0.190 0.128 0.000 0.000 chr9 136201333 136250812