Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RBP7 187 57 61 38 0 0 0.725 0.221 0.236 0.147 0.000 0.000 chr1 9992228 10021021
view RBPJL 222 81 31 21 1 0 0.860 0.314 0.120 0.081 0.004 0.000 chr20 45301840 45322824
view RBPJ 157 54 74 33 0 0 0.609 0.209 0.287 0.128 0.000 0.000 chr4 26316014 26439923
view RBPMS2 125 13 120 82 0 0 0.484 0.050 0.465 0.318 0.000 0.000 chr15 64734891 64780589
view RBPMS 151 47 69 40 0 0 0.585 0.182 0.267 0.155 0.000 0.000 chr8 30379541 30577256
view RBSN 179 51 64 40 0 0 0.694 0.198 0.248 0.155 0.000 0.000 chr3 15065073 15104148
view RBX1 159 39 80 50 0 0 0.616 0.151 0.310 0.194 0.000 0.000 chr22 40946378 40978309
view RC3H1 154 55 89 46 0 0 0.597 0.213 0.345 0.178 0.000 0.000 chr1 173926084 174027357
view RC3H2 159 42 77 53 0 0 0.616 0.163 0.298 0.205 0.000 0.000 chr9 122839556 122910359
view RCAN1 188 58 50 35 0 0 0.729 0.225 0.194 0.136 0.000 0.000 chr21 34511442 34620113
view RCAN2 79 16 104 60 0 0 0.306 0.062 0.403 0.233 0.000 0.000 chr6 46215736 46496449
view RCAN3 165 47 80 49 0 0 0.640 0.182 0.310 0.190 0.000 0.000 chr1 24497836 24546040
view RCBTB1 208 75 39 24 0 0 0.806 0.291 0.151 0.093 0.000 0.000 chr13 49526946 49590558
view RCBTB2 159 55 84 40 0 0 0.616 0.213 0.326 0.155 0.000 0.000 chr13 48483963 48538080
view RCC1L 134 15 111 80 0 0 0.519 0.058 0.430 0.310 0.000 0.000 chr7 75037183 75078802
view RCC1 146 31 93 60 0 0 0.566 0.120 0.360 0.233 0.000 0.000 chr1 28501043 28543989
view RCC2 194 63 45 29 0 0 0.752 0.244 0.174 0.112 0.000 0.000 chr1 17401760 17444677
view RCCD1 215 72 38 29 0 0 0.833 0.279 0.147 0.112 0.000 0.000 chr15 90949884 90968125
view RCE1 205 72 52 32 0 0 0.795 0.279 0.202 0.124 0.000 0.000 chr11 66838441 66851552
view RCHY1 202 75 47 27 1 1 0.783 0.291 0.182 0.105 0.004 0.004 chr4 75474033 75519403
view RCL1 192 64 47 31 0 0 0.744 0.248 0.182 0.120 0.000 0.000 chr9 4787944 4866066
view RCN1 201 70 52 32 0 0 0.779 0.271 0.202 0.124 0.000 0.000 chr11 32086074 32110722
view RCN2 210 77 39 24 0 0 0.814 0.298 0.151 0.093 0.000 0.000 chr15 76926749 76959393
view RCN3 189 52 58 43 0 0 0.733 0.202 0.225 0.167 0.000 0.000 chr19 49523003 49548633
view RCOR1 145 38 78 48 0 0 0.562 0.147 0.302 0.186 0.000 0.000 chr14 102587649 102735561
view RCOR2 161 38 92 64 1 0 0.624 0.147 0.357 0.248 0.004 0.000 chr11 63906230 63922164
view RCOR3 161 54 86 43 0 0 0.624 0.209 0.333 0.167 0.000 0.000 chr1 211254366 211321385
view RCSD1 174 56 54 32 0 0 0.674 0.217 0.209 0.124 0.000 0.000 chr1 167625232 167713696
view RCVRN 239 88 18 16 0 0 0.926 0.341 0.070 0.062 0.000 0.000 chr17 9891320 9910271
view RD3L 219 79 35 24 0 0 0.849 0.306 0.136 0.093 0.000 0.000 chr14 103935426 103947529
view RD3 207 79 44 22 1 0 0.802 0.306 0.171 0.085 0.004 0.000 chr1 211471522 211497162
view RDH10 197 71 54 31 0 0 0.764 0.275 0.209 0.120 0.000 0.000 chr8 73289602 73330281
view RDH11 218 78 37 25 0 0 0.845 0.302 0.143 0.097 0.000 0.000 chr14 67671800 67700764
view RDH12 216 77 37 24 1 1 0.837 0.298 0.143 0.093 0.004 0.004 chr14 67696886 67739451
view RDH13 188 65 62 34 0 0 0.729 0.252 0.240 0.132 0.000 0.000 chr19 55039316 55068148
view RDH14 225 88 31 15 0 0 0.872 0.341 0.120 0.058 0.000 0.000 chr2 18549723 18565653
view RDH16 187 53 65 46 1 1 0.725 0.205 0.252 0.178 0.004 0.004 chr12 56946431 56962608
view RDH5 203 65 52 38 0 0 0.787 0.252 0.202 0.147 0.000 0.000 chr12 55715393 55729705
view RDH8 231 84 20 16 2 0 0.895 0.326 0.078 0.062 0.008 0.000 chr19 10008483 10027279
view RDM1 177 66 77 36 0 0 0.686 0.256 0.298 0.140 0.000 0.000 chr17 35913080 35935773
view RDX 187 68 60 30 0 0 0.725 0.264 0.233 0.116 0.000 0.000 chr11 110224441 110301614
view REC114 93 27 115 57 0 0 0.360 0.105 0.446 0.221 0.000 0.000 chr15 73438164 73565013
view REC8 217 78 38 24 0 0 0.841 0.302 0.147 0.093 0.000 0.000 chr14 24167080 24185254
view RECK 195 70 52 30 0 0 0.756 0.271 0.202 0.116 0.000 0.000 chr9 36031913 36129455
view RECQL4 205 65 46 34 1 1 0.795 0.252 0.178 0.132 0.004 0.004 chr8 144506288 144522833
view RECQL5 188 59 59 39 0 0 0.729 0.229 0.229 0.151 0.000 0.000 chr17 75621854 75672154
view RECQL 201 75 46 23 0 0 0.779 0.291 0.178 0.089 0.000 0.000 chr12 21463910 21506635
view REELD1 216 79 32 19 0 0 0.837 0.306 0.124 0.074 0.000 0.000 chr4 146209538 146237267
view REEP1 159 47 83 49 0 0 0.616 0.182 0.322 0.190 0.000 0.000 chr2 86208993 86342626
view REEP2 215 76 40 26 1 1 0.833 0.295 0.155 0.101 0.004 0.004 chr5 138434057 138451965