Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RGS18 167 65 84 38 0 0 0.647 0.252 0.326 0.147 0.000 0.000 chr1 192153462 192190815
view RGS19 194 55 58 45 0 0 0.752 0.213 0.225 0.174 0.000 0.000 chr20 64068181 64084518
view RGS1 245 97 13 8 0 0 0.950 0.376 0.050 0.031 0.000 0.000 chr1 192570773 192585024
view RGS20 128 36 70 40 0 0 0.496 0.140 0.271 0.155 0.000 0.000 chr8 53846795 53964303
view RGS21 150 46 87 45 0 0 0.581 0.178 0.337 0.174 0.000 0.000 chr1 192311992 192372285
view RGS22 154 51 74 43 0 0 0.597 0.198 0.287 0.167 0.000 0.000 chr8 99955936 100111049
view RGS2 214 81 41 23 1 0 0.829 0.314 0.159 0.089 0.004 0.000 chr1 192804039 192817275
view RGS3 83 13 118 61 0 0 0.322 0.050 0.457 0.236 0.000 0.000 chr9 113458727 113602738
view RGS4 224 81 28 20 2 1 0.868 0.314 0.109 0.078 0.008 0.004 chr1 163064361 163081802
view RGS5 160 41 77 50 0 0 0.620 0.159 0.298 0.194 0.000 0.000 chr1 163137299 163207916
view RGS6 65 5 104 56 0 0 0.252 0.019 0.403 0.217 0.000 0.000 chr14 71927429 72571530
view RGS7BP 139 35 82 50 0 0 0.539 0.136 0.318 0.194 0.000 0.000 chr5 64501015 64617319
view RGS7 56 3 106 59 0 0 0.217 0.012 0.411 0.229 0.000 0.000 chr1 240770514 241362205
view RGS8 149 45 80 40 0 0 0.578 0.174 0.310 0.155 0.000 0.000 chr1 182636818 182689587
view RGS9BP 221 84 34 18 0 0 0.857 0.326 0.132 0.070 0.000 0.000 chr19 32670848 32683300
view RGS9 110 14 112 67 0 0 0.426 0.054 0.434 0.260 0.000 0.000 chr17 65132370 65232703
view RGSL1 168 55 63 36 0 0 0.651 0.213 0.244 0.140 0.000 0.000 chr1 182445146 182565597
view RHAG 199 65 51 33 0 0 0.771 0.252 0.198 0.128 0.000 0.000 chr6 49600175 49641839
view RHBDD1 131 44 68 38 0 0 0.508 0.171 0.264 0.147 0.000 0.000 chr2 226831054 227004210
view RHBDD2 196 59 55 40 0 0 0.760 0.229 0.213 0.155 0.000 0.000 chr7 75874034 75893926
view RHBDD3 225 82 32 22 0 0 0.872 0.318 0.124 0.085 0.000 0.000 chr22 29254872 29272981
view RHBDF1 198 62 53 36 0 0 0.767 0.240 0.205 0.140 0.000 0.000 chr16 53059 77631
view RHBDF2 181 51 63 42 0 0 0.702 0.198 0.244 0.163 0.000 0.000 chr17 76465896 76506423
view RHBDL1 185 56 68 45 0 0 0.717 0.217 0.264 0.174 0.000 0.000 chr16 670671 683268
view RHBDL2 181 61 59 32 0 0 0.702 0.236 0.229 0.124 0.000 0.000 chr1 38880807 38946830
view RHBDL3 152 32 72 48 0 0 0.589 0.124 0.279 0.186 0.000 0.000 chr17 32260832 32329659
view RHBG 218 77 36 24 1 1 0.845 0.298 0.140 0.093 0.004 0.004 chr1 156364211 156390219
view RHCE 166 52 79 44 0 0 0.643 0.202 0.306 0.171 0.000 0.000 chr1 25357249 25425825
view RHCG 179 51 67 46 0 0 0.694 0.198 0.260 0.178 0.000 0.000 chr15 89466407 89501583
view RHD 106 35 127 55 0 0 0.411 0.136 0.492 0.213 0.000 0.000 chr1 25267509 25335445
view RHEBL1 186 64 65 36 1 1 0.721 0.248 0.252 0.140 0.004 0.004 chr12 49059676 49074979
view RHEB 181 61 63 37 0 0 0.702 0.236 0.244 0.143 0.000 0.000 chr7 151461012 151524895
view RHEX 166 45 63 39 0 0 0.643 0.174 0.244 0.151 0.000 0.000 chr1 206048173 206107449
view RHNO1 212 78 45 26 0 0 0.822 0.302 0.174 0.101 0.000 0.000 chr12 2872223 2894524
view RHOA 131 23 111 72 0 0 0.508 0.089 0.430 0.279 0.000 0.000 chr3 49354145 49416976
view RHOBTB1 157 46 70 44 0 0 0.609 0.178 0.271 0.171 0.000 0.000 chr10 60864438 60949185
view RHOBTB2 178 51 68 44 0 0 0.690 0.198 0.264 0.171 0.000 0.000 chr8 22994548 23025199
view RHOBTB3 151 38 76 50 0 0 0.585 0.147 0.295 0.194 0.000 0.000 chr5 95726336 95801361
view RHOB 183 55 66 42 1 0 0.709 0.213 0.256 0.163 0.004 0.000 chr2 20442074 20454440
view RHOC 213 77 42 26 0 0 0.826 0.298 0.163 0.101 0.000 0.000 chr1 112696131 112712127
view RHOD 196 65 52 34 0 0 0.760 0.252 0.202 0.132 0.000 0.000 chr11 67051847 67077017
view RHOF 192 56 59 43 1 0 0.744 0.217 0.229 0.167 0.004 0.000 chr12 121772754 121798688
view RHOG 233 87 21 15 0 0 0.903 0.337 0.081 0.058 0.000 0.000 chr11 3821978 3845959
view RHOH 157 69 85 27 0 0 0.609 0.267 0.329 0.105 0.000 0.000 chr4 40192031 40251967
view RHOJ 159 59 72 33 0 0 0.616 0.229 0.279 0.128 0.000 0.000 chr14 63199443 63298508
view RHOQ 165 42 74 53 0 0 0.640 0.163 0.287 0.205 0.000 0.000 chr2 46537490 46589688
view RHOT1 141 43 96 55 0 0 0.547 0.167 0.372 0.213 0.000 0.000 chr17 32137502 32230727
view RHOT2 189 57 65 44 0 0 0.733 0.221 0.252 0.171 0.000 0.000 chr16 663132 679171
view RHOU 189 60 66 44 1 0 0.733 0.233 0.256 0.171 0.004 0.000 chr1 228730479 228751664
view RHOV 180 61 76 42 0 0 0.698 0.236 0.295 0.163 0.000 0.000 chr15 40867214 40879234