Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RIPPLY2 198 61 57 42 0 0 0.767 0.236 0.221 0.163 0.000 0.000 chr6 83848360 83862515
view RIPPLY3 216 78 41 26 0 0 0.837 0.302 0.159 0.101 0.000 0.000 chr21 37001702 37024662
view RIT1 170 47 85 56 0 0 0.659 0.182 0.329 0.217 0.000 0.000 chr1 155892808 155916349
view RIT2 119 37 73 32 0 0 0.461 0.143 0.283 0.124 0.000 0.000 chr18 42738227 43120685
view RITA1 192 68 64 35 0 0 0.744 0.264 0.248 0.136 0.000 0.000 chr12 113180721 113197368
view RLBP1 206 69 44 28 0 0 0.798 0.267 0.171 0.109 0.000 0.000 chr15 89204869 89226579
view RLF 168 53 75 43 0 0 0.651 0.205 0.291 0.167 0.000 0.000 chr1 40156387 40245921
view RLIG1 177 60 76 42 1 0 0.686 0.233 0.295 0.163 0.004 0.000 chr12 88030536 88055160
view RLIM 56 7 186 85 0 0 0.217 0.027 0.721 0.329 0.000 0.000 chrX 74577976 74619624
view RLN1 223 82 35 23 0 0 0.864 0.318 0.136 0.089 0.000 0.000 chr9 5329930 5344876
view RLN2 225 88 31 15 0 0 0.872 0.341 0.120 0.058 0.000 0.000 chr9 5294864 5309716
view RLN3 213 76 42 26 0 0 0.826 0.295 0.163 0.101 0.000 0.000 chr19 14023148 14036551
view RMC1 204 77 45 22 0 0 0.791 0.298 0.174 0.085 0.000 0.000 chr18 23498511 23536822
view RMDN1 183 61 66 39 0 0 0.709 0.236 0.256 0.151 0.000 0.000 chr8 86467349 86513686
view RMDN2 163 51 71 40 0 0 0.632 0.198 0.275 0.155 0.000 0.000 chr2 37920287 38022744
view RMDN3 201 70 55 34 0 0 0.779 0.271 0.213 0.132 0.000 0.000 chr15 40730887 40760254
view RMI1 201 73 50 28 1 1 0.779 0.283 0.194 0.109 0.004 0.004 chr9 83975805 84009074
view RMI2 212 71 42 30 0 0 0.822 0.275 0.163 0.116 0.000 0.000 chr16 11340459 11356760
view RMND1 195 73 52 25 0 0 0.756 0.283 0.202 0.097 0.000 0.000 chr6 151399762 151457126
view RMND5A 151 41 88 54 0 0 0.585 0.159 0.341 0.209 0.000 0.000 chr2 86715291 86783041
view RMND5B 205 68 50 34 0 0 0.795 0.264 0.194 0.132 0.000 0.000 chr5 178126014 178155568
view RNASE10 197 58 54 40 0 0 0.764 0.225 0.209 0.155 0.000 0.000 chr14 20500537 20518884
view RNASE12 240 94 16 9 1 1 0.930 0.364 0.062 0.035 0.004 0.004 chr14 20585073 20596376
view RNASE13 238 91 20 14 0 0 0.922 0.353 0.078 0.054 0.000 0.000 chr14 21027818 21039807
view RNASE1 225 83 33 22 0 0 0.872 0.322 0.128 0.085 0.000 0.000 chr14 20796228 20807844
view RNASE2 204 78 48 24 0 0 0.791 0.302 0.186 0.093 0.000 0.000 chr14 20950487 20961436
view RNASE3 210 81 44 22 4 2 0.814 0.314 0.171 0.085 0.016 0.008 chr14 20886385 20897348
view RNASE4 234 88 16 9 1 1 0.907 0.341 0.062 0.035 0.004 0.004 chr14 20679560 20706216
view RNASE6 232 85 25 19 1 1 0.899 0.329 0.097 0.074 0.004 0.004 chr14 20776268 20787467
view RNASE7 241 90 16 14 0 0 0.934 0.349 0.062 0.054 0.000 0.000 chr14 21037362 21049233
view RNASE8 223 77 31 24 0 0 0.864 0.298 0.120 0.093 0.000 0.000 chr14 21052822 21063455
view RNASE9 238 94 20 11 0 0 0.922 0.364 0.078 0.043 0.000 0.000 chr14 20551093 20566047
view RNASEH1 203 71 49 29 0 0 0.787 0.275 0.190 0.112 0.000 0.000 chr2 3536430 3563333
view RNASEH2A 205 70 45 29 0 0 0.795 0.271 0.174 0.112 0.000 0.000 chr19 12801584 12818640
view RNASEH2B 191 68 59 34 0 0 0.740 0.264 0.229 0.132 0.000 0.000 chr13 50904791 50961762
view RNASEH2C 222 82 29 19 3 1 0.860 0.318 0.112 0.074 0.012 0.004 chr11 65712673 65725798
view RNASEK 195 63 58 37 0 0 0.756 0.244 0.225 0.143 0.000 0.000 chr17 7007624 7019532
view RNASEL 216 80 40 24 0 0 0.837 0.310 0.155 0.093 0.000 0.000 chr1 182568634 182594256
view RNASET2 172 47 69 45 0 0 0.667 0.182 0.267 0.174 0.000 0.000 chr6 166917113 166961550
view RND1 199 66 53 36 3 0 0.771 0.256 0.205 0.140 0.012 0.000 chr12 48852145 48870870
view RND2 160 47 90 50 0 0 0.620 0.182 0.349 0.194 0.000 0.000 chr17 43020231 43037041
view RND3 209 75 44 27 0 0 0.810 0.291 0.171 0.105 0.000 0.000 chr2 150463195 150492667
view RNF103 200 68 49 31 0 0 0.775 0.264 0.190 0.120 0.000 0.000 chr2 86598398 86628865
view RNF10 185 59 62 38 0 0 0.717 0.229 0.240 0.147 0.000 0.000 chr12 120529356 120582588
view RNF111 164 52 73 45 0 0 0.636 0.202 0.283 0.174 0.000 0.000 chr15 58982663 59102419
view RNF112 177 57 74 42 0 0 0.686 0.221 0.287 0.163 0.000 0.000 chr17 19406232 19422276
view RNF113A 88 29 163 72 1 0 0.341 0.112 0.632 0.279 0.004 0.000 chrX 119865475 119876733
view RNF113B 229 88 28 16 0 0 0.888 0.341 0.109 0.062 0.000 0.000 chr13 98170785 98182269
view RNF114 212 82 41 21 0 0 0.822 0.318 0.159 0.081 0.000 0.000 chr20 49931397 49958885
view RNF115 135 40 101 56 1 0 0.523 0.155 0.391 0.217 0.004 0.000 chr1 145733868 145829095